RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
CTDSP1-214ENST00000497677 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
CTDSP1-214ENST00000497677 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
CTDSP1-214ENST00000497677 SPRR2DP22532 72 aa6.07□□□□□ -1.44
CTDSP1-214ENST00000497677 KRTAP19-7Q3SYF9 63 aa6.01□□□□□ -1.45
CTDSP1-214ENST00000497677 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
CTDSP1-214ENST00000497677 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
CTDSP1-214ENST00000497677 MT1EP04732 61 aa5.94□□□□□ -1.46
CTDSP1-214ENST00000497677 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
CTDSP1-214ENST00000497677 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
CTDSP1-214ENST00000497677 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
CTDSP1-214ENST00000497677 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
CTDSP1-214ENST00000497677 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
CTDSP1-214ENST00000497677 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
CTDSP1-214ENST00000497677 GPR98Q8WXG9 6306 aa5.75□□□□□ -1.49
CTDSP1-214ENST00000497677 MT1GP13640 62 aa5.73□□□□□ -1.49
CTDSP1-214ENST00000497677 MT1LQ93083 61 aa5.69□□□□□ -1.5
CTDSP1-214ENST00000497677 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
CTDSP1-214ENST00000497677 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
CTDSP1-214ENST00000497677 MT1MQ8N339 61 aa5.64□□□□□ -1.51
CTDSP1-214ENST00000497677 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
CTDSP1-214ENST00000497677 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
CTDSP1-214ENST00000497677 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
CTDSP1-214ENST00000497677 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
CTDSP1-214ENST00000497677 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
CTDSP1-214ENST00000497677 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
CTDSP1-214ENST00000497677 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
CTDSP1-214ENST00000497677 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
CTDSP1-214ENST00000497677 KRTAP5-4Q6L8H1 288 aa5.35□□□□□ -1.55
CTDSP1-214ENST00000497677 MT4P47944 62 aa5.3□□□□□ -1.56
CTDSP1-214ENST00000497677 HMCN1Q96RW7 5635 aa5.27□□□□□ -1.57
CTDSP1-214ENST00000497677 LUZP6Q538Z0 58 aa5.27□□□□□ -1.57
CTDSP1-214ENST00000497677 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
CTDSP1-214ENST00000497677 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
CTDSP1-214ENST00000497677 AHNAK2Q8IVF2 5795 aa5.2□□□□□ -1.58
CTDSP1-214ENST00000497677 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
CTDSP1-214ENST00000497677 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
CTDSP1-214ENST00000497677 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
CTDSP1-214ENST00000497677 NDUFAF8A1L188 74 aa5□□□□□ -1.61
CTDSP1-214ENST00000497677 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
CTDSP1-214ENST00000497677 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
CTDSP1-214ENST00000497677 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
CTDSP1-214ENST00000497677 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
CTDSP1-214ENST00000497677 KRTAP5-7Q6L8G8 165 aa4.86□□□□□ -1.63
CTDSP1-214ENST00000497677 MT1AP04731 61 aa4.84□□□□□ -1.63
CTDSP1-214ENST00000497677 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
CTDSP1-214ENST00000497677 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
CTDSP1-214ENST00000497677 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
CTDSP1-214ENST00000497677 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
CTDSP1-214ENST00000497677 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
CTDSP1-214ENST00000497677 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
CTDSP1-214ENST00000497677 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
CTDSP1-214ENST00000497677 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
CTDSP1-214ENST00000497677 MT3P25713 68 aa4.41□□□□□ -1.7
CTDSP1-214ENST00000497677 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
CTDSP1-214ENST00000497677 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
CTDSP1-214ENST00000497677 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
CTDSP1-214ENST00000497677 H3BS24 57 aa4.3□□□□□ -1.72
CTDSP1-214ENST00000497677 INE1O15225 51 aa4.25□□□□□ -1.73
CTDSP1-214ENST00000497677 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
CTDSP1-214ENST00000497677 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
CTDSP1-214ENST00000497677 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CTDSP1-214ENST00000497677 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
CTDSP1-214ENST00000497677 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
CTDSP1-214ENST00000497677 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
CTDSP1-214ENST00000497677 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
CTDSP1-214ENST00000497677 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
CTDSP1-214ENST00000497677 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
CTDSP1-214ENST00000497677 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
CTDSP1-214ENST00000497677 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CTDSP1-214ENST00000497677 PRM1P04553 51 aa3.37□□□□□ -1.87
CTDSP1-214ENST00000497677 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CTDSP1-214ENST00000497677 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
CTDSP1-214ENST00000497677 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
CTDSP1-214ENST00000497677 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CTDSP1-214ENST00000497677 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
CTDSP1-214ENST00000497677 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
CTDSP1-214ENST00000497677 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms