RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 FAM208BQ5VWN6 2430 aa1.31□□□□□ -2.2
RAB3GAP1-206ENST00000497080 ZNF292O60281 2723 aa1.3□□□□□ -2.2
RAB3GAP1-206ENST00000497080 PKD1L2Q7Z442 2459 aa1.3□□□□□ -2.2
RAB3GAP1-206ENST00000497080 USP9YO00507 2555 aaPredicted RBP1.3□□□□□ -2.2
RAB3GAP1-206ENST00000497080 TEX15Q9BXT5 2789 aa1.3□□□□□ -2.2
RAB3GAP1-206ENST00000497080 NF1P21359 2839 aa1.29□□□□□ -2.2
RAB3GAP1-206ENST00000497080 NBEAL2Q6ZNJ1 2754 aa1.29□□□□□ -2.2
RAB3GAP1-206ENST00000497080 OTOGQ6ZRI0 2925 aa1.29□□□□□ -2.2
RAB3GAP1-206ENST00000497080 POLQO75417 2590 aa1.28□□□□□ -2.2
RAB3GAP1-206ENST00000497080 LAMA5O15230 3695 aa1.28□□□□□ -2.2
RAB3GAP1-206ENST00000497080 COL12A1Q99715 3063 aa1.27□□□□□ -2.21
RAB3GAP1-206ENST00000497080 COL6A5A8TX70 2615 aa1.27□□□□□ -2.21
RAB3GAP1-206ENST00000497080 EPG5Q9HCE0 2579 aa1.27□□□□□ -2.21
RAB3GAP1-206ENST00000497080 LRRK2Q5S007 2527 aa1.27□□□□□ -2.21
RAB3GAP1-206ENST00000497080 ACACBO00763 2458 aa1.27□□□□□ -2.21
RAB3GAP1-206ENST00000497080 FASNP49327 2511 aaKnown RBP1.26□□□□□ -2.21
RAB3GAP1-206ENST00000497080 DNAH1Q9P2D7 4330 aa1.26□□□□□ -2.21
RAB3GAP1-206ENST00000497080 ABCA12Q86UK0 2595 aa1.26□□□□□ -2.21
RAB3GAP1-206ENST00000497080 ZANQ9Y493 2812 aa1.25□□□□□ -2.21
RAB3GAP1-206ENST00000497080 TGP01266 2768 aa1.25□□□□□ -2.21
RAB3GAP1-206ENST00000497080 HECTD1Q9ULT8 2610 aa1.25□□□□□ -2.21
RAB3GAP1-206ENST00000497080 CFAP46Q8IYW2 2715 aa1.24□□□□□ -2.21
RAB3GAP1-206ENST00000497080 MYO18BQ8IUG5 2567 aa1.24□□□□□ -2.21
RAB3GAP1-206ENST00000497080 NIPBLQ6KC79 2804 aaeCLIP1.24□□□□□ -2.21
RAB3GAP1-206ENST00000497080 DMBT1Q9UGM3 2413 aaPredicted RBP1.24□□□□□ -2.21
RAB3GAP1-206ENST00000497080 CSMD2Q7Z408 3487 aa1.23□□□□□ -2.21
RAB3GAP1-206ENST00000497080 PDZD2O15018 2839 aa1.23□□□□□ -2.21
RAB3GAP1-206ENST00000497080 MXRA5Q9NR99 2828 aa1.23□□□□□ -2.21
RAB3GAP1-206ENST00000497080 TENM4Q6N022 2769 aa1.23□□□□□ -2.21
RAB3GAP1-206ENST00000497080 CRYBG3Q68DQ2 2970 aa1.23□□□□□ -2.21
RAB3GAP1-206ENST00000497080 CACNA1AO00555 2505 aa1.23□□□□□ -2.21
RAB3GAP1-206ENST00000497080 STAB2Q8WWQ8 2551 aa1.22□□□□□ -2.21
RAB3GAP1-206ENST00000497080 SETD2Q9BYW2 2564 aaPredicted RBP1.22□□□□□ -2.21
RAB3GAP1-206ENST00000497080 SRRM2Q9UQ35 2752 aaKnown RBP1.22□□□□□ -2.21
RAB3GAP1-206ENST00000497080 HIVEP1P15822 2718 aa1.22□□□□□ -2.21
RAB3GAP1-206ENST00000497080 DNAH8Q96JB1 4490 aa1.22□□□□□ -2.21
RAB3GAP1-206ENST00000497080 MEGF8Q7Z7M0 2845 aa1.21□□□□□ -2.22
RAB3GAP1-206ENST00000497080 VPS13CQ709C8 3753 aa1.21□□□□□ -2.22
RAB3GAP1-206ENST00000497080 HUWE1Q7Z6Z7 4374 aaKnown RBP1.21□□□□□ -2.22
RAB3GAP1-206ENST00000497080 AKAP9Q99996 3911 aa1.21□□□□□ -2.22
RAB3GAP1-206ENST00000497080 DNAH10Q8IVF4 4471 aa1.21□□□□□ -2.22
RAB3GAP1-206ENST00000497080 ITPR3Q14573 2671 aa1.21□□□□□ -2.22
RAB3GAP1-206ENST00000497080 NBPF19A0A087WUL8 3843 aa1.2□□□□□ -2.22
RAB3GAP1-206ENST00000497080 CUBNO60494 3623 aa1.2□□□□□ -2.22
RAB3GAP1-206ENST00000497080 KRTAP21-3Q3LHN1 58 aa1.2□□□□□ -2.22
RAB3GAP1-206ENST00000497080 IGSF10Q6WRI0 2623 aa1.2□□□□□ -2.22
RAB3GAP1-206ENST00000497080 VPS13DQ5THJ4 4388 aa1.2□□□□□ -2.22
RAB3GAP1-206ENST00000497080 VWFP04275 2813 aa1.2□□□□□ -2.22
RAB3GAP1-206ENST00000497080 FLNCQ14315 2725 aa1.19□□□□□ -2.22
RAB3GAP1-206ENST00000497080 DNAH17Q9UFH2 4485 aa1.19□□□□□ -2.22
RAB3GAP1-206ENST00000497080 NBEAL1Q6ZS30 2694 aa1.19□□□□□ -2.22
RAB3GAP1-206ENST00000497080 DNAH9Q9NYC9 4486 aa1.18□□□□□ -2.22
RAB3GAP1-206ENST00000497080 TENM3Q9P273 2699 aa1.18□□□□□ -2.22
RAB3GAP1-206ENST00000497080 FLNAP21333 2647 aaKnown RBP1.18□□□□□ -2.22
RAB3GAP1-206ENST00000497080 ATRQ13535 2644 aa1.18□□□□□ -2.22
RAB3GAP1-206ENST00000497080 ZNF469Q96JG9 3925 aaPredicted RBP1.18□□□□□ -2.22
RAB3GAP1-206ENST00000497080 ITPR2Q14571 2701 aa1.17□□□□□ -2.22
RAB3GAP1-206ENST00000497080 MAST4O15021 2626 aa1.17□□□□□ -2.22
RAB3GAP1-206ENST00000497080 USP24Q9UPU5 2620 aa1.17□□□□□ -2.22
RAB3GAP1-206ENST00000497080 CMYA5Q8N3K9 4069 aa1.16□□□□□ -2.22
RAB3GAP1-206ENST00000497080 TEP1Q99973 2627 aaKnown RBP1.15□□□□□ -2.23
RAB3GAP1-206ENST00000497080 DNAH3Q8TD57 4116 aa1.15□□□□□ -2.23
RAB3GAP1-206ENST00000497080 PKD1L1Q8TDX9 2849 aa1.15□□□□□ -2.23
RAB3GAP1-206ENST00000497080 SACSQ9NZJ4 4579 aa1.15□□□□□ -2.23
RAB3GAP1-206ENST00000497080 LRP1BQ9NZR2 4599 aa1.14□□□□□ -2.23
RAB3GAP1-206ENST00000497080 PLECQ15149 4684 aaKnown RBP1.14□□□□□ -2.23
RAB3GAP1-206ENST00000497080 NOTCH1P46531 2555 aa1.14□□□□□ -2.23
RAB3GAP1-206ENST00000497080 COL7A1Q02388 2944 aa1.14□□□□□ -2.23
RAB3GAP1-206ENST00000497080 DNAH11Q96DT5 4516 aa1.14□□□□□ -2.23
RAB3GAP1-206ENST00000497080 DYNC2H1Q8NCM8 4307 aaKnown RBP1.13□□□□□ -2.23
RAB3GAP1-206ENST00000497080 DNAH2Q9P225 4427 aa1.13□□□□□ -2.23
RAB3GAP1-206ENST00000497080 MGAM2Q2M2H8 2515 aa1.13□□□□□ -2.23
RAB3GAP1-206ENST00000497080 FLNBO75369 2602 aaKnown RBP1.12□□□□□ -2.23
RAB3GAP1-206ENST00000497080 FRAS1Q86XX4 4008 aa1.12□□□□□ -2.23
RAB3GAP1-206ENST00000497080 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
RAB3GAP1-206ENST00000497080 STAB1Q9NY15 2570 aa1.12□□□□□ -2.23
RAB3GAP1-206ENST00000497080 TRRAPQ9Y4A5 3859 aa1.12□□□□□ -2.23
RAB3GAP1-206ENST00000497080 LYSTQ99698 3801 aa1.12□□□□□ -2.23
RAB3GAP1-206ENST00000497080 ANK2Q01484 3957 aa1.12□□□□□ -2.23
RAB3GAP1-206ENST00000497080 DNAH6Q9C0G6 4158 aa1.11□□□□□ -2.23
RAB3GAP1-206ENST00000497080 SMR3BP02814 79 aaPredicted RBP1.11□□□□□ -2.23
RAB3GAP1-206ENST00000497080 KRTAP10-4P60372 401 aaPredicted RBP1.11□□□□□ -2.23
RAB3GAP1-206ENST00000497080 KRTAP8-1Q8IUC2 63 aa1.11□□□□□ -2.23
RAB3GAP1-206ENST00000497080 M0R2T5 61 aa1.1□□□□□ -2.23
RAB3GAP1-206ENST00000497080 PRKDCP78527 4128 aaKnown RBP1.1□□□□□ -2.23
RAB3GAP1-206ENST00000497080 DNAH5Q8TE73 4624 aa1.09□□□□□ -2.23
RAB3GAP1-206ENST00000497080 STARD9Q9P2P6 4700 aa1.09□□□□□ -2.23
RAB3GAP1-206ENST00000497080 HYDINQ4G0P3 5121 aa1.09□□□□□ -2.23
RAB3GAP1-206ENST00000497080 DYNC1H1Q14204 4646 aaKnown RBP1.08□□□□□ -2.24
RAB3GAP1-206ENST00000497080 DNAH7Q8WXX0 4024 aa1.07□□□□□ -2.24
RAB3GAP1-206ENST00000497080 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
RAB3GAP1-206ENST00000497080 HECTD4Q9Y4D8 3996 aa1.06□□□□□ -2.24
RAB3GAP1-206ENST00000497080 MYCBP2O75592 4640 aa1.05□□□□□ -2.24
RAB3GAP1-206ENST00000497080 FAT3Q8TDW7 4589 aa1.05□□□□□ -2.24
RAB3GAP1-206ENST00000497080 CSMD3Q7Z407 3707 aa1.04□□□□□ -2.24
RAB3GAP1-206ENST00000497080 FAT1Q14517 4588 aa1.04□□□□□ -2.24
RAB3GAP1-206ENST00000497080 LRP1Q07954 4544 aaKnown RBP1.04□□□□□ -2.24
RAB3GAP1-206ENST00000497080 APOBP04114 4563 aaKnown RBP1.04□□□□□ -2.24
RAB3GAP1-206ENST00000497080 FAT2Q9NYQ8 4349 aa1.03□□□□□ -2.24
RAB3GAP1-206ENST00000497080 PKHD1L1Q86WI1 4243 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms