RNA–Protein interactions for RNA: ENST00000495357.1

CCDC39-AS1-201, CCDC39 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene CCDC39-AS1, Length 283 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-AS1-201ENST00000495357 FREM2Q5SZK8 3169 aa-1.92□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 BOD1L1Q8NFC6 3051 aa-1.92□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 S100A13Q99584 98 aa-1.92□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 A0A1B0GUL6 1792 aa-1.93□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 MYO5CQ9NQX4 1742 aa-1.93□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 ERVK-7P63135 1459 aa-1.94□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 KRTAP20-1Q3LI63 56 aa-1.94□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 NCBP2-AS2Q69YL0 99 aa-1.94□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 PRUNE2Q8WUY3 3088 aa-1.94□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.95□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 LMTK2Q8IWU2 1503 aa-1.95□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 SMARCA2P51531 1590 aa-1.95□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 ZFHX4Q86UP3 3567 aa-1.95□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 PEG3Q9GZU2 1588 aa-1.96□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 ANKARQ7Z5J8 1434 aa-1.96□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 DEFB4AO15263 64 aa-1.96□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 ABCC6O95255 1503 aa-1.96□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 DNMBPQ6XZF7 1577 aa-1.97□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 H3BUT2 72 aa-1.97□□□□□ -2.72
CCDC39-AS1-201ENST00000495357 CLASP1Q7Z460 1538 aa-1.97□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 MROH1Q8NDA8 1641 aa-1.98□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 CFAP54Q96N23 3096 aa-1.98□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 MED14O60244 1454 aa-1.99□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 H3BVH4 76 aa-1.99□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 TDRG1Q3Y452 100 aa-1.99□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 PREX2Q70Z35 1606 aa-2.02□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 CRYBG3Q68DQ2 2970 aa-2.02□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 K7EMI3 77 aa-2.02□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 DIP2AQ14689 1571 aa-2.03□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 CFAP74Q9C0B2 1584 aa-2.03□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 C3P01024 1663 aa-2.03□□□□□ -2.73
CCDC39-AS1-201ENST00000495357 ATXN8Q156A1 80 aa-2.04□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 DEFB136Q30KP8 78 aa-2.04□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 RRBP1Q9P2E9 1410 aaKnown RBP-2.04□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 DCAF1Q9Y4B6 1507 aa-2.04□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 SMIM27A0A1W2PRY6 76 aa-2.06□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 RPS29P62273 56 aaKnown RBP-2.06□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 C18orf32Q8TCD1 76 aa-2.06□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 KAAG1Q9UBP8 84 aa-2.06□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 LEAP2Q969E1 77 aa-2.07□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 TMEM167BQ9NRX6 74 aa-2.07□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 MADDQ8WXG6 1647 aa-2.07□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 ASXL1Q8IXJ9 1541 aa-2.08□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 GLI2P10070 1586 aa-2.09□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 TIAM1Q13009 1591 aa-2.09□□□□□ -2.74
CCDC39-AS1-201ENST00000495357 SERF2P84101 59 aa-2.1□□□□□ -2.75
CCDC39-AS1-201ENST00000495357 FAM208AQ9UK61 1670 aaKnown RBP-2.12□□□□□ -2.75
CCDC39-AS1-201ENST00000495357 VPS13CQ709C8 3753 aa-2.12□□□□□ -2.75
CCDC39-AS1-201ENST00000495357 GNG13Q9P2W3 67 aa-2.12□□□□□ -2.75
CCDC39-AS1-201ENST00000495357 MYO15AQ9UKN7 3530 aa-2.15□□□□□ -2.75
CCDC39-AS1-201ENST00000495357 WDFY3Q8IZQ1 3526 aa-2.16□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 CCDC18Q5T9S5 1454 aa-2.17□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 WFDC10BQ8IUB3 73 aa-2.17□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 GNG2P59768 71 aa-2.18□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 LINC00308Q8TCZ7 52 aa-2.18□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 NMES1Q9C002 83 aa-2.18□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 KRTAP19-6Q3LI70 58 aa-2.19□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 CROCC2H7BZ55 1655 aa-2.19□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 KIF21BO75037 1637 aa-2.2□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 DEFB131AP59861 70 aa-2.2□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 S100ZQ8WXG8 99 aa-2.2□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 FRYLO94915 3013 aa-2.2□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 MT1FP04733 61 aa-2.21□□□□□ -2.76
CCDC39-AS1-201ENST00000495357 RB1CC1Q8TDY2 1594 aa-2.23□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 SPEGQ15772 3267 aa-2.23□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 ABCA8O94911 1581 aa-2.23□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 M0R1W7 72 aa-2.24□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 POLR2KP53803 58 aaKnown RBP-2.24□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 HILPDAQ9Y5L2 63 aa-2.25□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 ALS2Q96Q42 1657 aa-2.25□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 DUOX2Q9NRD8 1548 aa-2.26□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 LINC01549A6NIU2 74 aa-2.26□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 DMDP11532 3685 aa-2.27□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 EEA1Q15075 1411 aa-2.28□□□□□ -2.77
CCDC39-AS1-201ENST00000495357 PCNTO95613 3336 aa-2.29□□□□□ -2.78
CCDC39-AS1-201ENST00000495357 H0YGX0 51 aa-2.29□□□□□ -2.78
CCDC39-AS1-201ENST00000495357 ABCA9Q8IUA7 1624 aa-2.32□□□□□ -2.78
CCDC39-AS1-201ENST00000495357 EFCAB6Q5THR3 1501 aa-2.32□□□□□ -2.78
CCDC39-AS1-201ENST00000495357 ABCA6Q8N139 1617 aa-2.33□□□□□ -2.78
CCDC39-AS1-201ENST00000495357 CEP250Q9BV73 2442 aa-2.33□□□□□ -2.78
CCDC39-AS1-201ENST00000495357 UGGT1Q9NYU2 1555 aa-2.36□□□□□ -2.79
CCDC39-AS1-201ENST00000495357 IGIPA6NJ69 53 aa-2.36□□□□□ -2.79
CCDC39-AS1-201ENST00000495357 SZT2Q5T011 3432 aa-2.36□□□□□ -2.79
CCDC39-AS1-201ENST00000495357 CEP350Q5VT06 3117 aa-2.37□□□□□ -2.79
CCDC39-AS1-201ENST00000495357 CENPEQ02224 2701 aa-2.37□□□□□ -2.79
CCDC39-AS1-201ENST00000495357 MROH2AA6NES4 1674 aa-2.37□□□□□ -2.79
CCDC39-AS1-201ENST00000495357 PDCD5O14737 125 aa-2.39□□□□□ -2.79
CCDC39-AS1-201ENST00000495357 UGGT2Q9NYU1 1516 aa-2.4□□□□□ -2.79
CCDC39-AS1-201ENST00000495357 SMCO4Q9NRQ5 59 aa-2.41□□□□□ -2.8
CCDC39-AS1-201ENST00000495357 IQGAP3Q86VI3 1631 aa-2.44□□□□□ -2.8
CCDC39-AS1-201ENST00000495357 SYCP2Q9BX26 1530 aa-2.45□□□□□ -2.8
CCDC39-AS1-201ENST00000495357 AGLP35573 1532 aa-2.46□□□□□ -2.8
CCDC39-AS1-201ENST00000495357 PLNP26678 52 aa-2.46□□□□□ -2.8
CCDC39-AS1-201ENST00000495357 LMO7Q8WWI1 1683 aa-2.48□□□□□ -2.81
CCDC39-AS1-201ENST00000495357 CCDC180Q9P1Z9 1646 aa-2.51□□□□□ -2.81
CCDC39-AS1-201ENST00000495357 SMIM2Q9BVW6 85 aa-2.52□□□□□ -2.81
CCDC39-AS1-201ENST00000495357 EP400Q96L91 3159 aa-2.54□□□□□ -2.82
CCDC39-AS1-201ENST00000495357 EFCAB5A4FU69 1503 aa-2.54□□□□□ -2.82
CCDC39-AS1-201ENST00000495357 WDFY4Q6ZS81 3184 aa-2.55□□□□□ -2.82
CCDC39-AS1-201ENST00000495357 CPS1P31327 1500 aa-2.55□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms