RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 Q5VSD8 79 aa6.1□□□□□ -1.43
LDHA-211ENST00000494573 Q8N1X5 172 aa6.07□□□□□ -1.44
LDHA-211ENST00000494573 FLG2Q5D862 2391 aaPredicted RBP6.07□□□□□ -1.44
LDHA-211ENST00000494573 FAT1Q14517 4588 aa6.06□□□□□ -1.44
LDHA-211ENST00000494573 A6NED7 52 aa6.05□□□□□ -1.44
LDHA-211ENST00000494573 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
LDHA-211ENST00000494573 TNXBP22105 4242 aa6.01□□□□□ -1.45
LDHA-211ENST00000494573 LCA10Q71F78 164 aa5.99□□□□□ -1.45
LDHA-211ENST00000494573 HSPG2P98160 4391 aa5.99□□□□□ -1.45
LDHA-211ENST00000494573 A0A1B0GU69 56 aa5.98□□□□□ -1.45
LDHA-211ENST00000494573 SPINK7P58062 85 aa5.98□□□□□ -1.45
LDHA-211ENST00000494573 SPTSSBQ8NFR3 76 aa5.97□□□□□ -1.45
LDHA-211ENST00000494573 KMT2CQ8NEZ4 4911 aaKnown RBP5.97□□□□□ -1.45
LDHA-211ENST00000494573 ATP11AUNQ6ZP68 121 aa5.96□□□□□ -1.46
LDHA-211ENST00000494573 A8MU10 97 aa5.95□□□□□ -1.46
LDHA-211ENST00000494573 RPL37P61927 97 aaKnown RBP5.95□□□□□ -1.46
LDHA-211ENST00000494573 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
LDHA-211ENST00000494573 RYR1P21817 5038 aa5.94□□□□□ -1.46
LDHA-211ENST00000494573 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
LDHA-211ENST00000494573 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
LDHA-211ENST00000494573 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
LDHA-211ENST00000494573 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
LDHA-211ENST00000494573 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
LDHA-211ENST00000494573 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
LDHA-211ENST00000494573 UQCR11O14957 56 aa5.86□□□□□ -1.47
LDHA-211ENST00000494573 SEC61GP60059 68 aa5.86□□□□□ -1.47
LDHA-211ENST00000494573 LRP1Q07954 4544 aaKnown RBP5.84□□□□□ -1.47
LDHA-211ENST00000494573 RYR3Q15413 4870 aa5.83□□□□□ -1.48
LDHA-211ENST00000494573 A6NN06 94 aa5.83□□□□□ -1.48
LDHA-211ENST00000494573 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
LDHA-211ENST00000494573 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
LDHA-211ENST00000494573 DMBT1Q9UGM3 2413 aaPredicted RBP5.78□□□□□ -1.48
LDHA-211ENST00000494573 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
LDHA-211ENST00000494573 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
LDHA-211ENST00000494573 KIAA1109Q2LD37 5005 aa5.72□□□□□ -1.49
LDHA-211ENST00000494573 A0A1B0GU33 70 aa5.7□□□□□ -1.5
LDHA-211ENST00000494573 S4R3F8 94 aa5.7□□□□□ -1.5
LDHA-211ENST00000494573 H0YAA0 97 aa5.67□□□□□ -1.5
LDHA-211ENST00000494573 MYCBP2O75592 4640 aa5.67□□□□□ -1.5
LDHA-211ENST00000494573 RBM12B-AS1Q9P1G2 102 aa5.63□□□□□ -1.51
LDHA-211ENST00000494573 EPPK1P58107 5090 aaKnown RBP5.63□□□□□ -1.51
LDHA-211ENST00000494573 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
LDHA-211ENST00000494573 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
LDHA-211ENST00000494573 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
LDHA-211ENST00000494573 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
LDHA-211ENST00000494573 K7ERS5 55 aa5.51□□□□□ -1.53
LDHA-211ENST00000494573 P0C880 135 aa5.48□□□□□ -1.53
LDHA-211ENST00000494573 MUC17Q685J3 4493 aa5.48□□□□□ -1.53
LDHA-211ENST00000494573 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
LDHA-211ENST00000494573 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
LDHA-211ENST00000494573 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
LDHA-211ENST00000494573 LRP2P98164 4655 aa5.45□□□□□ -1.54
LDHA-211ENST00000494573 ABCA13Q86UQ4 5058 aa5.42□□□□□ -1.54
LDHA-211ENST00000494573 KRTAP4-1Q9BYQ7 146 aa5.42□□□□□ -1.54
LDHA-211ENST00000494573 HERC2O95714 4834 aa5.42□□□□□ -1.54
LDHA-211ENST00000494573 LPAP08519 4548 aa5.42□□□□□ -1.54
LDHA-211ENST00000494573 BIRC6Q9NR09 4857 aa5.42□□□□□ -1.54
LDHA-211ENST00000494573 M0QZ58 72 aa5.4□□□□□ -1.54
LDHA-211ENST00000494573 A0A0D9SG42 100 aa5.38□□□□□ -1.55
LDHA-211ENST00000494573 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
LDHA-211ENST00000494573 ROMO1P60602 79 aa5.34□□□□□ -1.55
LDHA-211ENST00000494573 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
LDHA-211ENST00000494573 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
LDHA-211ENST00000494573 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
LDHA-211ENST00000494573 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
LDHA-211ENST00000494573 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
LDHA-211ENST00000494573 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
LDHA-211ENST00000494573 R4GN34 69 aa5.24□□□□□ -1.57
LDHA-211ENST00000494573 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
LDHA-211ENST00000494573 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
LDHA-211ENST00000494573 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
LDHA-211ENST00000494573 HERC1Q15751 4861 aa5.15□□□□□ -1.58
LDHA-211ENST00000494573 CRIPTQ9P021 101 aa5.14□□□□□ -1.59
LDHA-211ENST00000494573 PCLOQ9Y6V0 5065 aa5.09□□□□□ -1.59
LDHA-211ENST00000494573 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
LDHA-211ENST00000494573 C10orf95Q9H7T3 257 aa5.04□□□□□ -1.6
LDHA-211ENST00000494573 MT1HP80294 61 aa4.96□□□□□ -1.62
LDHA-211ENST00000494573 CAMK2N1Q7Z7J9 78 aa4.95□□□□□ -1.62
LDHA-211ENST00000494573 M0R2T5 61 aa4.92□□□□□ -1.62
LDHA-211ENST00000494573 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
LDHA-211ENST00000494573 RNF213Q63HN8 5207 aa4.87□□□□□ -1.63
LDHA-211ENST00000494573 MT2AP02795 61 aa4.85□□□□□ -1.63
LDHA-211ENST00000494573 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
LDHA-211ENST00000494573 PLAC4Q8WY50 150 aa4.83□□□□□ -1.64
LDHA-211ENST00000494573 MUC2Q02817 5179 aa4.82□□□□□ -1.64
LDHA-211ENST00000494573 MT1FP04733 61 aa4.81□□□□□ -1.64
LDHA-211ENST00000494573 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
LDHA-211ENST00000494573 TNP1P09430 55 aa4.79□□□□□ -1.64
LDHA-211ENST00000494573 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
LDHA-211ENST00000494573 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
LDHA-211ENST00000494573 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
LDHA-211ENST00000494573 UBR4Q5T4S7 5183 aa4.67□□□□□ -1.66
LDHA-211ENST00000494573 MT1BP07438 61 aa4.65□□□□□ -1.67
LDHA-211ENST00000494573 KRTAP10-5P60370 271 aa4.56□□□□□ -1.68
LDHA-211ENST00000494573 MT1XP80297 61 aa4.56□□□□□ -1.68
LDHA-211ENST00000494573 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
LDHA-211ENST00000494573 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
LDHA-211ENST00000494573 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
LDHA-211ENST00000494573 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
LDHA-211ENST00000494573 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms