RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 SPATA8Q6RVD6 105 aa5.53□□□□□ -1.52
PHACTR4-204ENST00000493669 J3QL48 77 aa5.5□□□□□ -1.53
PHACTR4-204ENST00000493669 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
PHACTR4-204ENST00000493669 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
PHACTR4-204ENST00000493669 S4R3F8 94 aa5.47□□□□□ -1.53
PHACTR4-204ENST00000493669 H1FX-AS1Q4G0G2 97 aa5.46□□□□□ -1.54
PHACTR4-204ENST00000493669 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
PHACTR4-204ENST00000493669 KRTAP3-3Q9BYR6 98 aa5.45□□□□□ -1.54
PHACTR4-204ENST00000493669 RBM12B-AS1Q9P1G2 102 aa5.45□□□□□ -1.54
PHACTR4-204ENST00000493669 BIRC6Q9NR09 4857 aa5.45□□□□□ -1.54
PHACTR4-204ENST00000493669 HERC2O95714 4834 aa5.44□□□□□ -1.54
PHACTR4-204ENST00000493669 A6NN06 94 aa5.44□□□□□ -1.54
PHACTR4-204ENST00000493669 ABCA13Q86UQ4 5058 aa5.43□□□□□ -1.54
PHACTR4-204ENST00000493669 A0A1B0GU33 70 aa5.42□□□□□ -1.54
PHACTR4-204ENST00000493669 LRP2P98164 4655 aa5.41□□□□□ -1.54
PHACTR4-204ENST00000493669 H0YAA0 97 aa5.37□□□□□ -1.55
PHACTR4-204ENST00000493669 LPAP08519 4548 aa5.35□□□□□ -1.55
PHACTR4-204ENST00000493669 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
PHACTR4-204ENST00000493669 KRTAP10-6P60371 365 aaPredicted RBP5.34□□□□□ -1.56
PHACTR4-204ENST00000493669 CSAG1Q6PB30 78 aa5.32□□□□□ -1.56
PHACTR4-204ENST00000493669 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
PHACTR4-204ENST00000493669 KRTAP4-1Q9BYQ7 146 aa5.26□□□□□ -1.57
PHACTR4-204ENST00000493669 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
PHACTR4-204ENST00000493669 ADM2Q7Z4H4 148 aa5.24□□□□□ -1.57
PHACTR4-204ENST00000493669 P0C880 135 aa5.24□□□□□ -1.57
PHACTR4-204ENST00000493669 K7ERS5 55 aa5.23□□□□□ -1.57
PHACTR4-204ENST00000493669 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
PHACTR4-204ENST00000493669 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
PHACTR4-204ENST00000493669 M0QZ58 72 aa5.17□□□□□ -1.58
PHACTR4-204ENST00000493669 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
PHACTR4-204ENST00000493669 A0A0D9SG42 100 aa5.12□□□□□ -1.59
PHACTR4-204ENST00000493669 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
PHACTR4-204ENST00000493669 HERC1Q15751 4861 aa5.1□□□□□ -1.59
PHACTR4-204ENST00000493669 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
PHACTR4-204ENST00000493669 R4GN34 69 aa5.05□□□□□ -1.6
PHACTR4-204ENST00000493669 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
PHACTR4-204ENST00000493669 ROMO1P60602 79 aa5.04□□□□□ -1.6
PHACTR4-204ENST00000493669 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
PHACTR4-204ENST00000493669 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
PHACTR4-204ENST00000493669 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
PHACTR4-204ENST00000493669 LCE2CQ5TA81 110 aa4.97□□□□□ -1.61
PHACTR4-204ENST00000493669 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
PHACTR4-204ENST00000493669 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
PHACTR4-204ENST00000493669 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
PHACTR4-204ENST00000493669 LINC01554Q52M75 96 aa4.93□□□□□ -1.62
PHACTR4-204ENST00000493669 MUC2Q02817 5179 aa4.93□□□□□ -1.62
PHACTR4-204ENST00000493669 MT1HP80294 61 aa4.85□□□□□ -1.63
PHACTR4-204ENST00000493669 RNF213Q63HN8 5207 aa4.83□□□□□ -1.64
PHACTR4-204ENST00000493669 M0R2T5 61 aa4.82□□□□□ -1.64
PHACTR4-204ENST00000493669 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
PHACTR4-204ENST00000493669 SPRR2GQ9BYE4 73 aa4.77□□□□□ -1.65
PHACTR4-204ENST00000493669 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
PHACTR4-204ENST00000493669 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
PHACTR4-204ENST00000493669 FAT4Q6V0I7 4981 aa4.75□□□□□ -1.65
PHACTR4-204ENST00000493669 MT2AP02795 61 aa4.72□□□□□ -1.65
PHACTR4-204ENST00000493669 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
PHACTR4-204ENST00000493669 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
PHACTR4-204ENST00000493669 MT1FP04733 61 aa4.69□□□□□ -1.66
PHACTR4-204ENST00000493669 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
PHACTR4-204ENST00000493669 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
PHACTR4-204ENST00000493669 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
PHACTR4-204ENST00000493669 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
PHACTR4-204ENST00000493669 TNP1P09430 55 aa4.58□□□□□ -1.68
PHACTR4-204ENST00000493669 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
PHACTR4-204ENST00000493669 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
PHACTR4-204ENST00000493669 MT1BP07438 61 aa4.5□□□□□ -1.69
PHACTR4-204ENST00000493669 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
PHACTR4-204ENST00000493669 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
PHACTR4-204ENST00000493669 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
PHACTR4-204ENST00000493669 MT1XP80297 61 aa4.41□□□□□ -1.7
PHACTR4-204ENST00000493669 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
PHACTR4-204ENST00000493669 H3BS24 57 aa4.37□□□□□ -1.71
PHACTR4-204ENST00000493669 LCE2BO14633 110 aa4.35□□□□□ -1.71
PHACTR4-204ENST00000493669 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
PHACTR4-204ENST00000493669 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
PHACTR4-204ENST00000493669 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
PHACTR4-204ENST00000493669 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
PHACTR4-204ENST00000493669 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
PHACTR4-204ENST00000493669 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
PHACTR4-204ENST00000493669 KRTAP12-3P60328 96 aa4.15□□□□□ -1.74
PHACTR4-204ENST00000493669 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
PHACTR4-204ENST00000493669 USH2AO75445 5202 aa4.13□□□□□ -1.75
PHACTR4-204ENST00000493669 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
PHACTR4-204ENST00000493669 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
PHACTR4-204ENST00000493669 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
PHACTR4-204ENST00000493669 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
PHACTR4-204ENST00000493669 SSPOA2VEC9 5147 aa4.01□□□□□ -1.77
PHACTR4-204ENST00000493669 KRTAP4-8A0A0G2JLE6 195 aa3.98□□□□□ -1.77
PHACTR4-204ENST00000493669 KRTAP4-8Q9BYQ9 185 aa3.98□□□□□ -1.77
PHACTR4-204ENST00000493669 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
PHACTR4-204ENST00000493669 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
PHACTR4-204ENST00000493669 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.78
PHACTR4-204ENST00000493669 KMT2DO14686 5537 aa3.86□□□□□ -1.79
PHACTR4-204ENST00000493669 MT1EP04732 61 aa3.86□□□□□ -1.79
PHACTR4-204ENST00000493669 MT1LQ93083 61 aa3.81□□□□□ -1.8
PHACTR4-204ENST00000493669 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
PHACTR4-204ENST00000493669 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
PHACTR4-204ENST00000493669 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
PHACTR4-204ENST00000493669 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
PHACTR4-204ENST00000493669 KRTAP4-7Q9BYR0 210 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms