RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
SREBF2-208ENST00000491541 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
SREBF2-208ENST00000491541 LCE2DQ5TA82 110 aaPredicted RBP5.55□□□□□ -1.52
SREBF2-208ENST00000491541 MEGF8Q7Z7M0 2845 aa5.53□□□□□ -1.52
SREBF2-208ENST00000491541 FAT1Q14517 4588 aa5.53□□□□□ -1.52
SREBF2-208ENST00000491541 DYNC1H1Q14204 4646 aaKnown RBP5.52□□□□□ -1.53
SREBF2-208ENST00000491541 NDUFAF8A1L188 74 aa5.51□□□□□ -1.53
SREBF2-208ENST00000491541 P0C880 135 aa5.5□□□□□ -1.53
SREBF2-208ENST00000491541 KRTAP10-4P60372 401 aaPredicted RBP5.49□□□□□ -1.53
SREBF2-208ENST00000491541 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
SREBF2-208ENST00000491541 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
SREBF2-208ENST00000491541 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
SREBF2-208ENST00000491541 RPL37P61927 97 aaKnown RBP5.43□□□□□ -1.54
SREBF2-208ENST00000491541 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
SREBF2-208ENST00000491541 Q5VSD8 79 aa5.39□□□□□ -1.55
SREBF2-208ENST00000491541 DNHD1Q96M86 4753 aa5.37□□□□□ -1.55
SREBF2-208ENST00000491541 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
SREBF2-208ENST00000491541 TPRXLQ17RH7 258 aa5.33□□□□□ -1.56
SREBF2-208ENST00000491541 XP32Q5T750 250 aa5.32□□□□□ -1.56
SREBF2-208ENST00000491541 A0A0A0MQY5 61 aa5.26□□□□□ -1.57
SREBF2-208ENST00000491541 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
SREBF2-208ENST00000491541 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
SREBF2-208ENST00000491541 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
SREBF2-208ENST00000491541 M0R2T5 61 aa5.22□□□□□ -1.57
SREBF2-208ENST00000491541 S4R3F8 94 aa5.21□□□□□ -1.57
SREBF2-208ENST00000491541 A0A1B0GVY2 172 aa5.19□□□□□ -1.58
SREBF2-208ENST00000491541 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
SREBF2-208ENST00000491541 R4GN34 69 aa5.16□□□□□ -1.58
SREBF2-208ENST00000491541 KRTAP12-2P59991 146 aa5.13□□□□□ -1.59
SREBF2-208ENST00000491541 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
SREBF2-208ENST00000491541 KRTAP12-1P59990 96 aa5.12□□□□□ -1.59
SREBF2-208ENST00000491541 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
SREBF2-208ENST00000491541 KRTAP10-8P60410 259 aa5.09□□□□□ -1.59
SREBF2-208ENST00000491541 M0QZ58 72 aa5.09□□□□□ -1.6
SREBF2-208ENST00000491541 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
SREBF2-208ENST00000491541 RYR2Q92736 4967 aa5.01□□□□□ -1.61
SREBF2-208ENST00000491541 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
SREBF2-208ENST00000491541 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
SREBF2-208ENST00000491541 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
SREBF2-208ENST00000491541 HERC1Q15751 4861 aa4.93□□□□□ -1.62
SREBF2-208ENST00000491541 LCE2BO14633 110 aa4.91□□□□□ -1.62
SREBF2-208ENST00000491541 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
SREBF2-208ENST00000491541 RYR3Q15413 4870 aa4.8□□□□□ -1.64
SREBF2-208ENST00000491541 RYR1P21817 5038 aa4.79□□□□□ -1.64
SREBF2-208ENST00000491541 MT1HL1P0DM35 61 aa4.79□□□□□ -1.64
SREBF2-208ENST00000491541 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
SREBF2-208ENST00000491541 LPAP08519 4548 aa4.72□□□□□ -1.65
SREBF2-208ENST00000491541 KMT2CQ8NEZ4 4911 aaKnown RBP4.63□□□□□ -1.67
SREBF2-208ENST00000491541 LORP23490 312 aaPredicted RBP4.62□□□□□ -1.67
SREBF2-208ENST00000491541 BIRC6Q9NR09 4857 aa4.61□□□□□ -1.67
SREBF2-208ENST00000491541 TNP1P09430 55 aa4.6□□□□□ -1.67
SREBF2-208ENST00000491541 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
SREBF2-208ENST00000491541 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
SREBF2-208ENST00000491541 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
SREBF2-208ENST00000491541 HERC2O95714 4834 aa4.52□□□□□ -1.69
SREBF2-208ENST00000491541 LRP2P98164 4655 aa4.49□□□□□ -1.69
SREBF2-208ENST00000491541 SPRR2GQ9BYE4 73 aa4.47□□□□□ -1.69
SREBF2-208ENST00000491541 INE1O15225 51 aa4.41□□□□□ -1.7
SREBF2-208ENST00000491541 KRTAP4-1Q9BYQ7 146 aa4.4□□□□□ -1.71
SREBF2-208ENST00000491541 KIAA1109Q2LD37 5005 aa4.4□□□□□ -1.71
SREBF2-208ENST00000491541 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
SREBF2-208ENST00000491541 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
SREBF2-208ENST00000491541 HMCN2Q8NDA2 5059 aa4.34□□□□□ -1.72
SREBF2-208ENST00000491541 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
SREBF2-208ENST00000491541 ABCA13Q86UQ4 5058 aa4.32□□□□□ -1.72
SREBF2-208ENST00000491541 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
SREBF2-208ENST00000491541 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
SREBF2-208ENST00000491541 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
SREBF2-208ENST00000491541 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
SREBF2-208ENST00000491541 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
SREBF2-208ENST00000491541 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
SREBF2-208ENST00000491541 EPPK1P58107 5090 aaKnown RBP4.18□□□□□ -1.74
SREBF2-208ENST00000491541 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
SREBF2-208ENST00000491541 MUC2Q02817 5179 aa4.07□□□□□ -1.76
SREBF2-208ENST00000491541 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
SREBF2-208ENST00000491541 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
SREBF2-208ENST00000491541 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
SREBF2-208ENST00000491541 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
SREBF2-208ENST00000491541 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
SREBF2-208ENST00000491541 MT1XP80297 61 aa4.03□□□□□ -1.76
SREBF2-208ENST00000491541 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
SREBF2-208ENST00000491541 MT1BP07438 61 aa4□□□□□ -1.77
SREBF2-208ENST00000491541 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
SREBF2-208ENST00000491541 MT2AP02795 61 aa3.92□□□□□ -1.78
SREBF2-208ENST00000491541 MT1HP80294 61 aa3.91□□□□□ -1.78
SREBF2-208ENST00000491541 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
SREBF2-208ENST00000491541 MT1FP04733 61 aa3.88□□□□□ -1.79
SREBF2-208ENST00000491541 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
SREBF2-208ENST00000491541 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
SREBF2-208ENST00000491541 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
SREBF2-208ENST00000491541 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
SREBF2-208ENST00000491541 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
SREBF2-208ENST00000491541 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
SREBF2-208ENST00000491541 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
SREBF2-208ENST00000491541 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SREBF2-208ENST00000491541 RNF213Q63HN8 5207 aa3.71□□□□□ -1.82
SREBF2-208ENST00000491541 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
SREBF2-208ENST00000491541 MT1EP04732 61 aa3.67□□□□□ -1.82
SREBF2-208ENST00000491541 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
SREBF2-208ENST00000491541 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms