RNA–Protein interactions for RNA: ENST00000491013.5

FDPS-216, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5

Gene FDPS, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-216ENST00000491013 OCR1Q9BZK8 76 aa6.73□□□□□ -1.33
FDPS-216ENST00000491013 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
FDPS-216ENST00000491013 LINC00208Q96KT6 92 aa6.7□□□□□ -1.34
FDPS-216ENST00000491013 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
FDPS-216ENST00000491013 MT-ATP8P03928 68 aa6.67□□□□□ -1.34
FDPS-216ENST00000491013 MP68P56378 58 aa6.67□□□□□ -1.34
FDPS-216ENST00000491013 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
FDPS-216ENST00000491013 KLKP1Q107X0 134 aa6.66□□□□□ -1.34
FDPS-216ENST00000491013 A8MUN3 132 aa6.65□□□□□ -1.34
FDPS-216ENST00000491013 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
FDPS-216ENST00000491013 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
FDPS-216ENST00000491013 H3BPC8 53 aa6.61□□□□□ -1.35
FDPS-216ENST00000491013 NDUFC1O43677 76 aa6.61□□□□□ -1.35
FDPS-216ENST00000491013 SCGB1A1P11684 91 aa6.59□□□□□ -1.35
FDPS-216ENST00000491013 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
FDPS-216ENST00000491013 H0YAA0 97 aa6.56□□□□□ -1.36
FDPS-216ENST00000491013 MT1BP07438 61 aa6.56□□□□□ -1.36
FDPS-216ENST00000491013 Q5VV11 94 aa6.55□□□□□ -1.36
FDPS-216ENST00000491013 CRIPTQ9P021 101 aa6.55□□□□□ -1.36
FDPS-216ENST00000491013 MACF1Q9UPN3 7388 aaKnown RBP6.49□□□□□ -1.37
FDPS-216ENST00000491013 SMIM20Q8N5G0 67 aa6.49□□□□□ -1.37
FDPS-216ENST00000491013 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
FDPS-216ENST00000491013 SYNE2Q8WXH0 6885 aaKnown RBP6.46□□□□□ -1.37
FDPS-216ENST00000491013 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
FDPS-216ENST00000491013 TRAV7A0A075B6U4 112 aa6.44□□□□□ -1.38
FDPS-216ENST00000491013 A6NN06 94 aa6.44□□□□□ -1.38
FDPS-216ENST00000491013 KRTAP10-5P60370 271 aa6.4□□□□□ -1.38
FDPS-216ENST00000491013 SERP2Q8N6R1 65 aa6.39□□□□□ -1.39
FDPS-216ENST00000491013 ANAPC13Q9BS18 74 aa6.36□□□□□ -1.39
FDPS-216ENST00000491013 KRTAP6-3Q3LI67 103 aa6.35□□□□□ -1.39
FDPS-216ENST00000491013 ACYP2P14621 99 aa6.34□□□□□ -1.39
FDPS-216ENST00000491013 P0C880 135 aa6.33□□□□□ -1.4
FDPS-216ENST00000491013 COX7CP15954 63 aa6.33□□□□□ -1.4
FDPS-216ENST00000491013 C20orf197Q8N268 126 aa6.33□□□□□ -1.4
FDPS-216ENST00000491013 SNURFQ9Y675 71 aa6.29□□□□□ -1.4
FDPS-216ENST00000491013 R4GN34 69 aa6.29□□□□□ -1.4
FDPS-216ENST00000491013 M0QZ58 72 aa6.24□□□□□ -1.41
FDPS-216ENST00000491013 PCP4P48539 62 aa6.24□□□□□ -1.41
FDPS-216ENST00000491013 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
FDPS-216ENST00000491013 SPANXA2-OT1Q8N9U9 137 aa6.22□□□□□ -1.41
FDPS-216ENST00000491013 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
FDPS-216ENST00000491013 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
FDPS-216ENST00000491013 CCDC179H3BU77 68 aa6.18□□□□□ -1.42
FDPS-216ENST00000491013 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
FDPS-216ENST00000491013 MT1XP80297 61 aa6.17□□□□□ -1.42
FDPS-216ENST00000491013 LINC01554Q52M75 96 aa6.13□□□□□ -1.43
FDPS-216ENST00000491013 H7BZZ5 65 aa6.11□□□□□ -1.43
FDPS-216ENST00000491013 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
FDPS-216ENST00000491013 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
FDPS-216ENST00000491013 TMEM258P61165 79 aa6.06□□□□□ -1.44
FDPS-216ENST00000491013 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
FDPS-216ENST00000491013 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
FDPS-216ENST00000491013 NEBP20929 6669 aa6.03□□□□□ -1.44
FDPS-216ENST00000491013 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
FDPS-216ENST00000491013 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
FDPS-216ENST00000491013 COA5Q86WW8 74 aa6.02□□□□□ -1.45
FDPS-216ENST00000491013 KMT2DO14686 5537 aa5.98□□□□□ -1.45
FDPS-216ENST00000491013 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
FDPS-216ENST00000491013 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
FDPS-216ENST00000491013 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
FDPS-216ENST00000491013 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
FDPS-216ENST00000491013 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
FDPS-216ENST00000491013 SEC61GP60059 68 aa5.88□□□□□ -1.47
FDPS-216ENST00000491013 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
FDPS-216ENST00000491013 SERP1Q9Y6X1 66 aa5.88□□□□□ -1.47
FDPS-216ENST00000491013 MDN1Q9NU22 5596 aa5.87□□□□□ -1.47
FDPS-216ENST00000491013 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
FDPS-216ENST00000491013 KRTAP20-1Q3LI63 56 aa5.82□□□□□ -1.48
FDPS-216ENST00000491013 SPRR2EP22531 72 aa5.8□□□□□ -1.48
FDPS-216ENST00000491013 SPRR2BP35325 72 aa5.8□□□□□ -1.48
FDPS-216ENST00000491013 SPRR2AP35326 72 aa5.8□□□□□ -1.48
FDPS-216ENST00000491013 A0A1B0GU33 70 aa5.79□□□□□ -1.48
FDPS-216ENST00000491013 CAMK2N1Q7Z7J9 78 aa5.79□□□□□ -1.48
FDPS-216ENST00000491013 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
FDPS-216ENST00000491013 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.49
FDPS-216ENST00000491013 A0A0D9SG42 100 aa5.75□□□□□ -1.49
FDPS-216ENST00000491013 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
FDPS-216ENST00000491013 KRTAP4-12Q9BQ66 201 aa5.73□□□□□ -1.49
FDPS-216ENST00000491013 A0A1B0GU69 56 aa5.71□□□□□ -1.5
FDPS-216ENST00000491013 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
FDPS-216ENST00000491013 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
FDPS-216ENST00000491013 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
FDPS-216ENST00000491013 SPINT4Q6UDR6 99 aa5.67□□□□□ -1.5
FDPS-216ENST00000491013 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
FDPS-216ENST00000491013 KRTAP9-9Q9BYP9 154 aa5.65□□□□□ -1.5
FDPS-216ENST00000491013 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
FDPS-216ENST00000491013 V9GYY9 64 aa5.65□□□□□ -1.5
FDPS-216ENST00000491013 Q1T7F1 81 aa5.63□□□□□ -1.51
FDPS-216ENST00000491013 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
FDPS-216ENST00000491013 SPRR2DP22532 72 aa5.61□□□□□ -1.51
FDPS-216ENST00000491013 A8MU10 97 aa5.57□□□□□ -1.52
FDPS-216ENST00000491013 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
FDPS-216ENST00000491013 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
FDPS-216ENST00000491013 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
FDPS-216ENST00000491013 KRTAP19-7Q3SYF9 63 aa5.52□□□□□ -1.53
FDPS-216ENST00000491013 MT1EP04732 61 aa5.46□□□□□ -1.54
FDPS-216ENST00000491013 PSPHP1O15172 72 aa5.42□□□□□ -1.54
FDPS-216ENST00000491013 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
FDPS-216ENST00000491013 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
FDPS-216ENST00000491013 C10orf95Q9H7T3 257 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms