RNA–Protein interactions for RNA: ENST00000489705.2

HNRNPU-211, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-211ENST00000489705 GCN1Q92616 2671 aaKnown RBP0.56□□□□□ -2.32
HNRNPU-211ENST00000489705 VPS13AQ96RL7 3174 aa0.56□□□□□ -2.32
HNRNPU-211ENST00000489705 EP400Q96L91 3159 aa0.56□□□□□ -2.32
HNRNPU-211ENST00000489705 DCHS2Q6V1P9 2916 aa0.56□□□□□ -2.32
HNRNPU-211ENST00000489705 LAMA1P25391 3075 aa0.56□□□□□ -2.32
HNRNPU-211ENST00000489705 LAMA2P24043 3122 aaKnown RBP0.55□□□□□ -2.32
HNRNPU-211ENST00000489705 FASNP49327 2511 aaKnown RBP0.55□□□□□ -2.32
HNRNPU-211ENST00000489705 SRCAPQ6ZRS2 3230 aa0.55□□□□□ -2.32
HNRNPU-211ENST00000489705 HTTP42858 3142 aa0.55□□□□□ -2.32
HNRNPU-211ENST00000489705 ACACBO00763 2458 aa0.55□□□□□ -2.32
HNRNPU-211ENST00000489705 MKI67P46013 3256 aaKnown RBP0.55□□□□□ -2.32
HNRNPU-211ENST00000489705 STAB1Q9NY15 2570 aa0.54□□□□□ -2.32
HNRNPU-211ENST00000489705 ITPR2Q14571 2701 aa0.54□□□□□ -2.32
HNRNPU-211ENST00000489705 MXRA5Q9NR99 2828 aa0.54□□□□□ -2.32
HNRNPU-211ENST00000489705 ZANQ9Y493 2812 aa0.54□□□□□ -2.32
HNRNPU-211ENST00000489705 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
HNRNPU-211ENST00000489705 C5orf42Q9H799 3197 aa0.54□□□□□ -2.32
HNRNPU-211ENST00000489705 HIVEP1P15822 2718 aa0.54□□□□□ -2.32
HNRNPU-211ENST00000489705 ZFHX4Q86UP3 3567 aa0.53□□□□□ -2.32
HNRNPU-211ENST00000489705 COL12A1Q99715 3063 aa0.53□□□□□ -2.32
HNRNPU-211ENST00000489705 CELSR3Q9NYQ7 3312 aa0.53□□□□□ -2.32
HNRNPU-211ENST00000489705 HRNRQ86YZ3 2850 aaPredicted RBP0.53□□□□□ -2.32
HNRNPU-211ENST00000489705 FLNAP21333 2647 aaKnown RBP0.53□□□□□ -2.32
HNRNPU-211ENST00000489705 CEP295Q9C0D2 2601 aa0.53□□□□□ -2.32
HNRNPU-211ENST00000489705 NSD1Q96L73 2696 aaPredicted RBP0.53□□□□□ -2.32
HNRNPU-211ENST00000489705 PKD1L1Q8TDX9 2849 aa0.53□□□□□ -2.32
HNRNPU-211ENST00000489705 FREM2Q5SZK8 3169 aa0.53□□□□□ -2.33
HNRNPU-211ENST00000489705 ATMQ13315 3056 aa0.52□□□□□ -2.33
HNRNPU-211ENST00000489705 VCANP13611 3396 aa0.52□□□□□ -2.33
HNRNPU-211ENST00000489705 UTRNP46939 3433 aa0.52□□□□□ -2.33
HNRNPU-211ENST00000489705 SMR3BP02814 79 aaPredicted RBP0.52□□□□□ -2.33
HNRNPU-211ENST00000489705 DMXL2Q8TDJ6 3036 aa0.52□□□□□ -2.33
HNRNPU-211ENST00000489705 IGSF10Q6WRI0 2623 aa0.51□□□□□ -2.33
HNRNPU-211ENST00000489705 PCNTO95613 3336 aa0.51□□□□□ -2.33
HNRNPU-211ENST00000489705 LAMA3Q16787 3333 aa0.51□□□□□ -2.33
HNRNPU-211ENST00000489705 SZT2Q5T011 3432 aa0.51□□□□□ -2.33
HNRNPU-211ENST00000489705 GOLGB1Q14789 3259 aaKnown RBP0.51□□□□□ -2.33
HNRNPU-211ENST00000489705 DCHS1Q96JQ0 3298 aa0.5□□□□□ -2.33
HNRNPU-211ENST00000489705 CENPFP49454 3210 aa0.5□□□□□ -2.33
HNRNPU-211ENST00000489705 PRM1P04553 51 aa0.5□□□□□ -2.33
HNRNPU-211ENST00000489705 RELNP78509 3460 aa0.5□□□□□ -2.33
HNRNPU-211ENST00000489705 NBPF19A0A087WUL8 3843 aa0.5□□□□□ -2.33
HNRNPU-211ENST00000489705 MGAM2Q2M2H8 2515 aa0.49□□□□□ -2.33
HNRNPU-211ENST00000489705 AKAP9Q99996 3911 aa0.49□□□□□ -2.33
HNRNPU-211ENST00000489705 MT1AP04731 61 aa0.49□□□□□ -2.33
HNRNPU-211ENST00000489705 KRTAP19-5Q3LI72 72 aa0.49□□□□□ -2.33
HNRNPU-211ENST00000489705 UNC80Q8N2C7 3258 aa0.49□□□□□ -2.33
HNRNPU-211ENST00000489705 MAST4O15021 2626 aa0.49□□□□□ -2.33
HNRNPU-211ENST00000489705 SPEGQ15772 3267 aa0.48□□□□□ -2.33
HNRNPU-211ENST00000489705 SPRR2GQ9BYE4 73 aa0.48□□□□□ -2.33
HNRNPU-211ENST00000489705 DMDP11532 3685 aa0.48□□□□□ -2.33
HNRNPU-211ENST00000489705 VPS13DQ5THJ4 4388 aa0.48□□□□□ -2.33
HNRNPU-211ENST00000489705 SPTBN5Q9NRC6 3674 aaKnown RBP0.47□□□□□ -2.33
HNRNPU-211ENST00000489705 SPRR2BP35325 72 aa0.47□□□□□ -2.33
HNRNPU-211ENST00000489705 FLNBO75369 2602 aaKnown RBP0.47□□□□□ -2.33
HNRNPU-211ENST00000489705 XIRP2A4UGR9 3374 aa0.46□□□□□ -2.34
HNRNPU-211ENST00000489705 SPRR2AP35326 72 aa0.46□□□□□ -2.34
HNRNPU-211ENST00000489705 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
HNRNPU-211ENST00000489705 LOC400499M0QZD8 3231 aa0.45□□□□□ -2.34
HNRNPU-211ENST00000489705 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
HNRNPU-211ENST00000489705 SPRR2DP22532 72 aa0.45□□□□□ -2.34
HNRNPU-211ENST00000489705 CSMD1Q96PZ7 3565 aa0.45□□□□□ -2.34
HNRNPU-211ENST00000489705 USP34Q70CQ2 3546 aa0.44□□□□□ -2.34
HNRNPU-211ENST00000489705 ADGRG4Q8IZF6 3080 aa0.44□□□□□ -2.34
HNRNPU-211ENST00000489705 ASPMQ8IZT6 3477 aa0.44□□□□□ -2.34
HNRNPU-211ENST00000489705 MT1EP04732 61 aa0.44□□□□□ -2.34
HNRNPU-211ENST00000489705 SPRR2FQ96RM1 72 aa0.44□□□□□ -2.34
HNRNPU-211ENST00000489705 LAMA5O15230 3695 aa0.44□□□□□ -2.34
HNRNPU-211ENST00000489705 FRAS1Q86XX4 4008 aa0.44□□□□□ -2.34
HNRNPU-211ENST00000489705 TNXBP22105 4242 aa0.43□□□□□ -2.34
HNRNPU-211ENST00000489705 SPENQ96T58 3664 aaKnown RBP0.43□□□□□ -2.34
HNRNPU-211ENST00000489705 CSMD2Q7Z408 3487 aa0.43□□□□□ -2.34
HNRNPU-211ENST00000489705 KRTAP19-8Q3LI54 63 aa0.43□□□□□ -2.34
HNRNPU-211ENST00000489705 MT1LQ93083 61 aa0.43□□□□□ -2.34
HNRNPU-211ENST00000489705 CSMD3Q7Z407 3707 aa0.43□□□□□ -2.34
HNRNPU-211ENST00000489705 LYSTQ99698 3801 aa0.42□□□□□ -2.34
HNRNPU-211ENST00000489705 BRCA2P51587 3418 aa0.42□□□□□ -2.34
HNRNPU-211ENST00000489705 SPRR2EP22531 72 aa0.42□□□□□ -2.34
HNRNPU-211ENST00000489705 FLGP20930 4061 aaPredicted RBP0.42□□□□□ -2.34
HNRNPU-211ENST00000489705 WDFY3Q8IZQ1 3526 aa0.42□□□□□ -2.34
HNRNPU-211ENST00000489705 SACSQ9NZJ4 4579 aa0.42□□□□□ -2.34
HNRNPU-211ENST00000489705 AHNAKQ09666 5890 aaKnown RBP0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 EYSQ5T1H1 3165 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 SMG1Q96Q15 3661 aaKnown RBP0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 DNAH14Q0VDD8 3507 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 DNAH11Q96DT5 4516 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 MUC3AQ02505 3323 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 MT1HP80294 61 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 KRTAP6-2Q3LI66 62 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 CMYA5Q8N3K9 4069 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 SVEP1Q4LDE5 3571 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 VPS13BQ7Z7G8 4022 aa0.41□□□□□ -2.34
HNRNPU-211ENST00000489705 HECTD4Q9Y4D8 3996 aa0.4□□□□□ -2.35
HNRNPU-211ENST00000489705 MT1XP80297 61 aa0.4□□□□□ -2.35
HNRNPU-211ENST00000489705 KRTAP19-2Q3LHN2 52 aa0.39□□□□□ -2.35
HNRNPU-211ENST00000489705 PRKDCP78527 4128 aaKnown RBP0.39□□□□□ -2.35
HNRNPU-211ENST00000489705 MYO15AQ9UKN7 3530 aa0.39□□□□□ -2.35
HNRNPU-211ENST00000489705 MYCBP2O75592 4640 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms