RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 KRTAP4-5Q9BYR2 181 aa10.13□□□□□ -0.79
POLR2J3-205ENST00000489144 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
POLR2J3-205ENST00000489144 Q8N1X5 172 aa10.12□□□□□ -0.79
POLR2J3-205ENST00000489144 C20orf166-AS1Q96NR2 134 aa10.1□□□□□ -0.79
POLR2J3-205ENST00000489144 NDUFAF8A1L188 74 aa10.09□□□□□ -0.79
POLR2J3-205ENST00000489144 H0YAA0 97 aa10.05□□□□□ -0.8
POLR2J3-205ENST00000489144 CRIPTQ9P021 101 aa10.04□□□□□ -0.8
POLR2J3-205ENST00000489144 SPINT4Q6UDR6 99 aa10.01□□□□□ -0.81
POLR2J3-205ENST00000489144 C9orf92A6NGG3 77 aa10□□□□□ -0.81
POLR2J3-205ENST00000489144 IGKV2-30P06310 120 aa10□□□□□ -0.81
POLR2J3-205ENST00000489144 KRTAP10-8P60410 259 aa10□□□□□ -0.81
POLR2J3-205ENST00000489144 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
POLR2J3-205ENST00000489144 BIRC6Q9NR09 4857 aa9.99□□□□□ -0.81
POLR2J3-205ENST00000489144 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
POLR2J3-205ENST00000489144 RPS29P62273 56 aaKnown RBP9.93□□□□□ -0.82
POLR2J3-205ENST00000489144 KRTAP15-1Q3LI76 137 aa9.91□□□□□ -0.82
POLR2J3-205ENST00000489144 HERC2O95714 4834 aa9.89□□□□□ -0.83
POLR2J3-205ENST00000489144 IGKV2D-30A0A075B6S6 120 aa9.84□□□□□ -0.83
POLR2J3-205ENST00000489144 K7ERS5 55 aa9.83□□□□□ -0.84
POLR2J3-205ENST00000489144 A0A1B0GU33 70 aa9.82□□□□□ -0.84
POLR2J3-205ENST00000489144 LPAP08519 4548 aa9.75□□□□□ -0.85
POLR2J3-205ENST00000489144 H1FX-AS1Q4G0G2 97 aa9.73□□□□□ -0.85
POLR2J3-205ENST00000489144 LUZP6Q538Z0 58 aa9.72□□□□□ -0.85
POLR2J3-205ENST00000489144 PCLOQ9Y6V0 5065 aa9.72□□□□□ -0.85
POLR2J3-205ENST00000489144 TPRXLQ17RH7 258 aa9.71□□□□□ -0.86
POLR2J3-205ENST00000489144 J3QL48 77 aa9.64□□□□□ -0.87
POLR2J3-205ENST00000489144 LRP2P98164 4655 aa9.62□□□□□ -0.87
POLR2J3-205ENST00000489144 XP32Q5T750 250 aa9.58□□□□□ -0.88
POLR2J3-205ENST00000489144 HERC1Q15751 4861 aa9.57□□□□□ -0.88
POLR2J3-205ENST00000489144 C10orf95Q9H7T3 257 aa9.49□□□□□ -0.89
POLR2J3-205ENST00000489144 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.9
POLR2J3-205ENST00000489144 COX6B2Q6YFQ2 88 aa9.45□□□□□ -0.9
POLR2J3-205ENST00000489144 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
POLR2J3-205ENST00000489144 KRTAP3-1Q9BYR8 98 aa9.26□□□□□ -0.93
POLR2J3-205ENST00000489144 MUC2Q02817 5179 aa9.26□□□□□ -0.93
POLR2J3-205ENST00000489144 HMCN2Q8NDA2 5059 aa9.22□□□□□ -0.93
POLR2J3-205ENST00000489144 A0A0D9SG42 100 aa9.17□□□□□ -0.94
POLR2J3-205ENST00000489144 KRTAP4-1Q9BYQ7 146 aa9.14□□□□□ -0.95
POLR2J3-205ENST00000489144 KRTAP13-4Q3LI77 160 aa9.12□□□□□ -0.95
POLR2J3-205ENST00000489144 MUC17Q685J3 4493 aa9.11□□□□□ -0.95
POLR2J3-205ENST00000489144 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
POLR2J3-205ENST00000489144 S4R3F8 94 aa9.05□□□□□ -0.96
POLR2J3-205ENST00000489144 UBR4Q5T4S7 5183 aa9.03□□□□□ -0.96
POLR2J3-205ENST00000489144 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
POLR2J3-205ENST00000489144 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
POLR2J3-205ENST00000489144 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
POLR2J3-205ENST00000489144 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
POLR2J3-205ENST00000489144 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.99
POLR2J3-205ENST00000489144 FAT4Q6V0I7 4981 aa8.82□□□□□ -1
POLR2J3-205ENST00000489144 KRTAP12-1P59990 96 aa8.79□□□□□ -1
POLR2J3-205ENST00000489144 CAMK2N1Q7Z7J9 78 aa8.76□□□□□ -1.01
POLR2J3-205ENST00000489144 KRTAP19-2Q3LHN2 52 aa8.75□□□□□ -1.01
POLR2J3-205ENST00000489144 FLGP20930 4061 aaPredicted RBP8.63□□□□□ -1.03
POLR2J3-205ENST00000489144 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
POLR2J3-205ENST00000489144 PRO2289Q9P1D8 64 aa8.48□□□□□ -1.05
POLR2J3-205ENST00000489144 M0QZ58 72 aa8.44□□□□□ -1.06
POLR2J3-205ENST00000489144 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
POLR2J3-205ENST00000489144 M0R2T5 61 aa8.4□□□□□ -1.07
POLR2J3-205ENST00000489144 MT1HP80294 61 aa8.38□□□□□ -1.07
POLR2J3-205ENST00000489144 PP632Q6XCG6 107 aa8.28□□□□□ -1.08
POLR2J3-205ENST00000489144 R4GN34 69 aa8.23□□□□□ -1.09
POLR2J3-205ENST00000489144 SPRR5A0A1B0GTR4 108 aa8.14□□□□□ -1.11
POLR2J3-205ENST00000489144 INE1O15225 51 aa8.09□□□□□ -1.11
POLR2J3-205ENST00000489144 MT1FP04733 61 aa8.08□□□□□ -1.12
POLR2J3-205ENST00000489144 MT2AP02795 61 aa8.07□□□□□ -1.12
POLR2J3-205ENST00000489144 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
POLR2J3-205ENST00000489144 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
POLR2J3-205ENST00000489144 LCE2AQ5TA79 106 aaPredicted RBP7.92□□□□□ -1.14
POLR2J3-205ENST00000489144 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
POLR2J3-205ENST00000489144 SPRR2GQ9BYE4 73 aa7.82□□□□□ -1.16
POLR2J3-205ENST00000489144 USH2AO75445 5202 aa7.75□□□□□ -1.17
POLR2J3-205ENST00000489144 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
POLR2J3-205ENST00000489144 KRTAP23-1A1A580 65 aa7.73□□□□□ -1.17
POLR2J3-205ENST00000489144 FSIP2Q5CZC0 6907 aa7.72□□□□□ -1.17
POLR2J3-205ENST00000489144 LCE2BO14633 110 aa7.61□□□□□ -1.19
POLR2J3-205ENST00000489144 MT1BP07438 61 aa7.61□□□□□ -1.19
POLR2J3-205ENST00000489144 TNP1P09430 55 aa7.57□□□□□ -1.2
POLR2J3-205ENST00000489144 KRTAP19-8Q3LI54 63 aa7.57□□□□□ -1.2
POLR2J3-205ENST00000489144 MT1XP80297 61 aa7.4□□□□□ -1.23
POLR2J3-205ENST00000489144 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
POLR2J3-205ENST00000489144 SSPOA2VEC9 5147 aa7.29□□□□□ -1.24
POLR2J3-205ENST00000489144 KMT2DO14686 5537 aa7.25□□□□□ -1.25
POLR2J3-205ENST00000489144 KRTAP10-7P60409 375 aaPredicted RBP7.2□□□□□ -1.26
POLR2J3-205ENST00000489144 LCE3AQ5TA76 89 aa7.11□□□□□ -1.27
POLR2J3-205ENST00000489144 LCE2DQ5TA82 110 aaPredicted RBP7.09□□□□□ -1.28
POLR2J3-205ENST00000489144 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
POLR2J3-205ENST00000489144 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
POLR2J3-205ENST00000489144 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
POLR2J3-205ENST00000489144 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
POLR2J3-205ENST00000489144 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
POLR2J3-205ENST00000489144 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
POLR2J3-205ENST00000489144 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
POLR2J3-205ENST00000489144 MACF1Q9UPN3 7388 aaKnown RBP6.81□□□□□ -1.32
POLR2J3-205ENST00000489144 CRCT1Q9UGL9 99 aa6.77□□□□□ -1.33
POLR2J3-205ENST00000489144 KRTAP19-5Q3LI72 72 aa6.75□□□□□ -1.33
POLR2J3-205ENST00000489144 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
POLR2J3-205ENST00000489144 SYNE2Q8WXH0 6885 aaKnown RBP6.73□□□□□ -1.33
POLR2J3-205ENST00000489144 KRTAP19-7Q3SYF9 63 aa6.59□□□□□ -1.35
POLR2J3-205ENST00000489144 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.35
POLR2J3-205ENST00000489144 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms