RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RETNLBQ9BQ08 111 aa7.68□□□□□ -1.18
COPS7B-221ENST00000488111 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
COPS7B-221ENST00000488111 RPS29P62273 56 aaKnown RBP7.6□□□□□ -1.19
COPS7B-221ENST00000488111 DMBT1Q9UGM3 2413 aaPredicted RBP7.6□□□□□ -1.19
COPS7B-221ENST00000488111 KRTAP16-1A8MUX0 517 aa7.57□□□□□ -1.2
COPS7B-221ENST00000488111 IGKV2D-30A0A075B6S6 120 aa7.56□□□□□ -1.2
COPS7B-221ENST00000488111 PCLOQ9Y6V0 5065 aa7.54□□□□□ -1.2
COPS7B-221ENST00000488111 A0A0A0MQY5 61 aa7.54□□□□□ -1.2
COPS7B-221ENST00000488111 J3QL48 77 aa7.54□□□□□ -1.2
COPS7B-221ENST00000488111 A8MUU9 505 aa7.48□□□□□ -1.21
COPS7B-221ENST00000488111 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.22
COPS7B-221ENST00000488111 H0YAA0 97 aa7.44□□□□□ -1.22
COPS7B-221ENST00000488111 C9orf92A6NGG3 77 aa7.43□□□□□ -1.22
COPS7B-221ENST00000488111 ROMO1P60602 79 aa7.38□□□□□ -1.23
COPS7B-221ENST00000488111 HERC1Q15751 4861 aa7.34□□□□□ -1.24
COPS7B-221ENST00000488111 A0A1B0GU33 70 aa7.32□□□□□ -1.24
COPS7B-221ENST00000488111 LPAP08519 4548 aa7.31□□□□□ -1.24
COPS7B-221ENST00000488111 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
COPS7B-221ENST00000488111 XP32Q5T750 250 aa7.25□□□□□ -1.25
COPS7B-221ENST00000488111 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
COPS7B-221ENST00000488111 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
COPS7B-221ENST00000488111 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
COPS7B-221ENST00000488111 LRP2P98164 4655 aa7.2□□□□□ -1.26
COPS7B-221ENST00000488111 P0C880 135 aa7.18□□□□□ -1.26
COPS7B-221ENST00000488111 HMCN2Q8NDA2 5059 aa7.18□□□□□ -1.26
COPS7B-221ENST00000488111 K7ERS5 55 aa7.17□□□□□ -1.26
COPS7B-221ENST00000488111 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
COPS7B-221ENST00000488111 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
COPS7B-221ENST00000488111 COX6B2Q6YFQ2 88 aa7.12□□□□□ -1.27
COPS7B-221ENST00000488111 SEC61BP60468 96 aaKnown RBP7.01□□□□□ -1.29
COPS7B-221ENST00000488111 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
COPS7B-221ENST00000488111 MUC17Q685J3 4493 aa6.96□□□□□ -1.3
COPS7B-221ENST00000488111 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.3
COPS7B-221ENST00000488111 KRTAP4-1Q9BYQ7 146 aa6.94□□□□□ -1.3
COPS7B-221ENST00000488111 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
COPS7B-221ENST00000488111 UBR4Q5T4S7 5183 aa6.92□□□□□ -1.3
COPS7B-221ENST00000488111 MUC2Q02817 5179 aa6.91□□□□□ -1.3
COPS7B-221ENST00000488111 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
COPS7B-221ENST00000488111 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
COPS7B-221ENST00000488111 KRTAP3-3Q9BYR6 98 aa6.88□□□□□ -1.31
COPS7B-221ENST00000488111 A0A0D9SG42 100 aa6.87□□□□□ -1.31
COPS7B-221ENST00000488111 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
COPS7B-221ENST00000488111 NDUFAF8A1L188 74 aa6.84□□□□□ -1.31
COPS7B-221ENST00000488111 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
COPS7B-221ENST00000488111 S4R3F8 94 aa6.79□□□□□ -1.32
COPS7B-221ENST00000488111 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
COPS7B-221ENST00000488111 KRTAP19-2Q3LHN2 52 aa6.68□□□□□ -1.34
COPS7B-221ENST00000488111 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
COPS7B-221ENST00000488111 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
COPS7B-221ENST00000488111 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
COPS7B-221ENST00000488111 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
COPS7B-221ENST00000488111 FLGP20930 4061 aaPredicted RBP6.53□□□□□ -1.36
COPS7B-221ENST00000488111 M0QZ58 72 aa6.52□□□□□ -1.37
COPS7B-221ENST00000488111 MT1HP80294 61 aa6.47□□□□□ -1.37
COPS7B-221ENST00000488111 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
COPS7B-221ENST00000488111 M0R2T5 61 aa6.43□□□□□ -1.38
COPS7B-221ENST00000488111 PLAC4Q8WY50 150 aa6.38□□□□□ -1.39
COPS7B-221ENST00000488111 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
COPS7B-221ENST00000488111 R4GN34 69 aa6.23□□□□□ -1.41
COPS7B-221ENST00000488111 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
COPS7B-221ENST00000488111 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
COPS7B-221ENST00000488111 MT2AP02795 61 aa6.18□□□□□ -1.42
COPS7B-221ENST00000488111 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
COPS7B-221ENST00000488111 MT1FP04733 61 aa6.16□□□□□ -1.42
COPS7B-221ENST00000488111 KRTAP10-10P60014 251 aa6.15□□□□□ -1.43
COPS7B-221ENST00000488111 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
COPS7B-221ENST00000488111 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
COPS7B-221ENST00000488111 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
COPS7B-221ENST00000488111 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.46
COPS7B-221ENST00000488111 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
COPS7B-221ENST00000488111 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
COPS7B-221ENST00000488111 LCE2BO14633 110 aa5.87□□□□□ -1.47
COPS7B-221ENST00000488111 TNP1P09430 55 aa5.82□□□□□ -1.48
COPS7B-221ENST00000488111 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
COPS7B-221ENST00000488111 MT1BP07438 61 aa5.79□□□□□ -1.48
COPS7B-221ENST00000488111 USH2AO75445 5202 aa5.78□□□□□ -1.48
COPS7B-221ENST00000488111 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
COPS7B-221ENST00000488111 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
COPS7B-221ENST00000488111 KRTAP9-2Q9BYQ4 174 aa5.63□□□□□ -1.51
COPS7B-221ENST00000488111 SSPOA2VEC9 5147 aa5.62□□□□□ -1.51
COPS7B-221ENST00000488111 MT1XP80297 61 aa5.58□□□□□ -1.52
COPS7B-221ENST00000488111 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
COPS7B-221ENST00000488111 INE1O15225 51 aa5.53□□□□□ -1.52
COPS7B-221ENST00000488111 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
COPS7B-221ENST00000488111 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
COPS7B-221ENST00000488111 CRCT1Q9UGL9 99 aa5.4□□□□□ -1.54
COPS7B-221ENST00000488111 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
COPS7B-221ENST00000488111 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
COPS7B-221ENST00000488111 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
COPS7B-221ENST00000488111 KMT2DO14686 5537 aa5.29□□□□□ -1.56
COPS7B-221ENST00000488111 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
COPS7B-221ENST00000488111 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
COPS7B-221ENST00000488111 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
COPS7B-221ENST00000488111 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
COPS7B-221ENST00000488111 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
COPS7B-221ENST00000488111 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
COPS7B-221ENST00000488111 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
COPS7B-221ENST00000488111 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
COPS7B-221ENST00000488111 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
COPS7B-221ENST00000488111 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms