RNA–Protein interactions for RNA: ENST00000487976.2

CCDC180-205, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 3,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-205ENST00000487976 FAT2Q9NYQ8 4349 aa5.81□□□□□ -1.48
CCDC180-205ENST00000487976 PKHD1P08F94 4074 aa5.8□□□□□ -1.48
CCDC180-205ENST00000487976 TPRXLQ17RH7 258 aa5.8□□□□□ -1.48
CCDC180-205ENST00000487976 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
CCDC180-205ENST00000487976 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
CCDC180-205ENST00000487976 LRP1BQ9NZR2 4599 aa5.79□□□□□ -1.48
CCDC180-205ENST00000487976 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
CCDC180-205ENST00000487976 RPL37P61927 97 aaKnown RBP5.78□□□□□ -1.48
CCDC180-205ENST00000487976 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
CCDC180-205ENST00000487976 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
CCDC180-205ENST00000487976 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
CCDC180-205ENST00000487976 A0A0D9SG42 100 aa5.72□□□□□ -1.49
CCDC180-205ENST00000487976 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
CCDC180-205ENST00000487976 KIAA1109Q2LD37 5005 aa5.7□□□□□ -1.5
CCDC180-205ENST00000487976 VPS13BQ7Z7G8 4022 aa5.7□□□□□ -1.5
CCDC180-205ENST00000487976 RPS29P62273 56 aaKnown RBP5.68□□□□□ -1.5
CCDC180-205ENST00000487976 HERC2O95714 4834 aa5.68□□□□□ -1.5
CCDC180-205ENST00000487976 RYR1P21817 5038 aa5.67□□□□□ -1.5
CCDC180-205ENST00000487976 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
CCDC180-205ENST00000487976 DMBT1Q9UGM3 2413 aaPredicted RBP5.66□□□□□ -1.5
CCDC180-205ENST00000487976 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.51
CCDC180-205ENST00000487976 DYNC1H1Q14204 4646 aaKnown RBP5.64□□□□□ -1.51
CCDC180-205ENST00000487976 KRTAP10-6P60371 365 aaPredicted RBP5.62□□□□□ -1.51
CCDC180-205ENST00000487976 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
CCDC180-205ENST00000487976 A0A1B0GVY2 172 aa5.59□□□□□ -1.51
CCDC180-205ENST00000487976 HSPG2P98160 4391 aa5.59□□□□□ -1.51
CCDC180-205ENST00000487976 S4R3F8 94 aa5.58□□□□□ -1.52
CCDC180-205ENST00000487976 KRTAP17-1Q9BYP8 105 aa5.56□□□□□ -1.52
CCDC180-205ENST00000487976 SMR3BP02814 79 aaPredicted RBP5.56□□□□□ -1.52
CCDC180-205ENST00000487976 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
CCDC180-205ENST00000487976 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
CCDC180-205ENST00000487976 LORP23490 312 aaPredicted RBP5.55□□□□□ -1.52
CCDC180-205ENST00000487976 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
CCDC180-205ENST00000487976 KRTAP12-2P59991 146 aa5.51□□□□□ -1.53
CCDC180-205ENST00000487976 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
CCDC180-205ENST00000487976 FAT1Q14517 4588 aa5.47□□□□□ -1.53
CCDC180-205ENST00000487976 XP32Q5T750 250 aa5.46□□□□□ -1.54
CCDC180-205ENST00000487976 HERC1Q15751 4861 aa5.44□□□□□ -1.54
CCDC180-205ENST00000487976 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
CCDC180-205ENST00000487976 MYCBP2O75592 4640 aa5.4□□□□□ -1.55
CCDC180-205ENST00000487976 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
CCDC180-205ENST00000487976 KRTAP10-8P60410 259 aa5.36□□□□□ -1.55
CCDC180-205ENST00000487976 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
CCDC180-205ENST00000487976 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
CCDC180-205ENST00000487976 TNXBP22105 4242 aa5.33□□□□□ -1.56
CCDC180-205ENST00000487976 Q5VSD8 79 aa5.32□□□□□ -1.56
CCDC180-205ENST00000487976 M0QZ58 72 aa5.29□□□□□ -1.56
CCDC180-205ENST00000487976 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
CCDC180-205ENST00000487976 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
CCDC180-205ENST00000487976 MT1HL1P0DM35 61 aa5.17□□□□□ -1.58
CCDC180-205ENST00000487976 R4GN34 69 aa5.16□□□□□ -1.58
CCDC180-205ENST00000487976 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.59
CCDC180-205ENST00000487976 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
CCDC180-205ENST00000487976 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
CCDC180-205ENST00000487976 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
CCDC180-205ENST00000487976 LRP2P98164 4655 aa4.99□□□□□ -1.61
CCDC180-205ENST00000487976 LPAP08519 4548 aa4.93□□□□□ -1.62
CCDC180-205ENST00000487976 MUC2Q02817 5179 aa4.88□□□□□ -1.63
CCDC180-205ENST00000487976 INE1O15225 51 aa4.88□□□□□ -1.63
CCDC180-205ENST00000487976 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
CCDC180-205ENST00000487976 MUC17Q685J3 4493 aa4.82□□□□□ -1.64
CCDC180-205ENST00000487976 TNP1P09430 55 aa4.77□□□□□ -1.65
CCDC180-205ENST00000487976 KRTAP4-1Q9BYQ7 146 aa4.76□□□□□ -1.65
CCDC180-205ENST00000487976 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
CCDC180-205ENST00000487976 FAT4Q6V0I7 4981 aa4.65□□□□□ -1.66
CCDC180-205ENST00000487976 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
CCDC180-205ENST00000487976 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
CCDC180-205ENST00000487976 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
CCDC180-205ENST00000487976 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
CCDC180-205ENST00000487976 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
CCDC180-205ENST00000487976 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
CCDC180-205ENST00000487976 FSIP2Q5CZC0 6907 aa4.35□□□□□ -1.71
CCDC180-205ENST00000487976 M0R2T5 61 aa4.32□□□□□ -1.72
CCDC180-205ENST00000487976 MT1HP80294 61 aa4.32□□□□□ -1.72
CCDC180-205ENST00000487976 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
CCDC180-205ENST00000487976 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
CCDC180-205ENST00000487976 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
CCDC180-205ENST00000487976 MT2AP02795 61 aa4.25□□□□□ -1.73
CCDC180-205ENST00000487976 KRTAP10-10P60014 251 aa4.23□□□□□ -1.73
CCDC180-205ENST00000487976 MT1FP04733 61 aa4.23□□□□□ -1.73
CCDC180-205ENST00000487976 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
CCDC180-205ENST00000487976 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
CCDC180-205ENST00000487976 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
CCDC180-205ENST00000487976 KRTAP19-8Q3LI54 63 aa4.18□□□□□ -1.74
CCDC180-205ENST00000487976 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
CCDC180-205ENST00000487976 USH2AO75445 5202 aa4.14□□□□□ -1.75
CCDC180-205ENST00000487976 MT1BP07438 61 aa4.09□□□□□ -1.75
CCDC180-205ENST00000487976 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
CCDC180-205ENST00000487976 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
CCDC180-205ENST00000487976 KRTAP4-8Q9BYQ9 185 aa4.06□□□□□ -1.76
CCDC180-205ENST00000487976 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
CCDC180-205ENST00000487976 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
CCDC180-205ENST00000487976 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
CCDC180-205ENST00000487976 MT1XP80297 61 aa4.04□□□□□ -1.76
CCDC180-205ENST00000487976 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
CCDC180-205ENST00000487976 CRCT1Q9UGL9 99 aa4.02□□□□□ -1.77
CCDC180-205ENST00000487976 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
CCDC180-205ENST00000487976 KRTAP9-7A8MTY7 169 aa3.99□□□□□ -1.77
CCDC180-205ENST00000487976 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
CCDC180-205ENST00000487976 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms