RNA–Protein interactions for RNA: ENST00000487947.6

PDCD10-214, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-214ENST00000487947 DCHS2Q6V1P9 2916 aa0.29□□□□□ -2.36
PDCD10-214ENST00000487947 NBEAL2Q6ZNJ1 2754 aa0.28□□□□□ -2.36
PDCD10-214ENST00000487947 KALRNO60229 2985 aa0.27□□□□□ -2.37
PDCD10-214ENST00000487947 SPRR2AP35326 72 aa0.27□□□□□ -2.37
PDCD10-214ENST00000487947 CELSR3Q9NYQ7 3312 aa0.27□□□□□ -2.37
PDCD10-214ENST00000487947 MTORP42345 2549 aa0.27□□□□□ -2.37
PDCD10-214ENST00000487947 ANKRD11Q6UB99 2663 aaPredicted RBP0.26□□□□□ -2.37
PDCD10-214ENST00000487947 ZANQ9Y493 2812 aa0.26□□□□□ -2.37
PDCD10-214ENST00000487947 COL12A1Q99715 3063 aa0.26□□□□□ -2.37
PDCD10-214ENST00000487947 MT1AP04731 61 aa0.26□□□□□ -2.37
PDCD10-214ENST00000487947 ACACBO00763 2458 aa0.26□□□□□ -2.37
PDCD10-214ENST00000487947 CRYBG3Q68DQ2 2970 aa0.26□□□□□ -2.37
PDCD10-214ENST00000487947 FRYQ5TBA9 3013 aa0.25□□□□□ -2.37
PDCD10-214ENST00000487947 LRRK2Q5S007 2527 aa0.25□□□□□ -2.37
PDCD10-214ENST00000487947 ANKHD1Q8IWZ3 2542 aaKnown RBP0.25□□□□□ -2.37
PDCD10-214ENST00000487947 H3BSH0 61 aa0.25□□□□□ -2.37
PDCD10-214ENST00000487947 KRTAP8-1Q8IUC2 63 aa0.25□□□□□ -2.37
PDCD10-214ENST00000487947 COL6A3P12111 3177 aa0.25□□□□□ -2.37
PDCD10-214ENST00000487947 IGSF10Q6WRI0 2623 aa0.25□□□□□ -2.37
PDCD10-214ENST00000487947 CMYA5Q8N3K9 4069 aa0.25□□□□□ -2.37
PDCD10-214ENST00000487947 MAST4O15021 2626 aa0.24□□□□□ -2.37
PDCD10-214ENST00000487947 RELNP78509 3460 aa0.24□□□□□ -2.37
PDCD10-214ENST00000487947 SMR3BP02814 79 aaPredicted RBP0.24□□□□□ -2.37
PDCD10-214ENST00000487947 SPART-AS1P0CW21 52 aa0.24□□□□□ -2.37
PDCD10-214ENST00000487947 RIF1Q5UIP0 2472 aaKnown RBP0.24□□□□□ -2.37
PDCD10-214ENST00000487947 SPG11Q96JI7 2443 aa0.24□□□□□ -2.37
PDCD10-214ENST00000487947 HIVEP1P15822 2718 aa0.23□□□□□ -2.37
PDCD10-214ENST00000487947 SPRR2EP22531 72 aa0.23□□□□□ -2.37
PDCD10-214ENST00000487947 KRTAP19-5Q3LI72 72 aa0.23□□□□□ -2.37
PDCD10-214ENST00000487947 LINC01590Q5TEZ4 76 aa0.23□□□□□ -2.37
PDCD10-214ENST00000487947 TRIOO75962 3097 aa0.22□□□□□ -2.37
PDCD10-214ENST00000487947 TEP1Q99973 2627 aaKnown RBP0.22□□□□□ -2.37
PDCD10-214ENST00000487947 USP9YO00507 2555 aaPredicted RBP0.22□□□□□ -2.37
PDCD10-214ENST00000487947 MAP1AP78559 2803 aaPredicted RBP0.22□□□□□ -2.37
PDCD10-214ENST00000487947 ITPR3Q14573 2671 aa0.21□□□□□ -2.38
PDCD10-214ENST00000487947 FASNP49327 2511 aaKnown RBP0.21□□□□□ -2.38
PDCD10-214ENST00000487947 PRCDQ00LT1 54 aa0.21□□□□□ -2.38
PDCD10-214ENST00000487947 SPRR2FQ96RM1 72 aa0.21□□□□□ -2.38
PDCD10-214ENST00000487947 FAM186AA6NE01 2351 aa0.21□□□□□ -2.38
PDCD10-214ENST00000487947 NBEAQ8NFP9 2946 aa0.21□□□□□ -2.38
PDCD10-214ENST00000487947 MYO18BQ8IUG5 2567 aa0.21□□□□□ -2.38
PDCD10-214ENST00000487947 STARD9Q9P2P6 4700 aa0.21□□□□□ -2.38
PDCD10-214ENST00000487947 UTP20O75691 2785 aaKnown RBP0.21□□□□□ -2.38
PDCD10-214ENST00000487947 HTTP42858 3142 aa0.2□□□□□ -2.38
PDCD10-214ENST00000487947 CSMD1Q96PZ7 3565 aa0.2□□□□□ -2.38
PDCD10-214ENST00000487947 MUC17Q685J3 4493 aa0.2□□□□□ -2.38
PDCD10-214ENST00000487947 LAMA1P25391 3075 aa0.19□□□□□ -2.38
PDCD10-214ENST00000487947 TRRAPQ9Y4A5 3859 aa0.19□□□□□ -2.38
PDCD10-214ENST00000487947 PCLOQ9Y6V0 5065 aa0.19□□□□□ -2.38
PDCD10-214ENST00000487947 KMT2CQ8NEZ4 4911 aaKnown RBP0.19□□□□□ -2.38
PDCD10-214ENST00000487947 EPG5Q9HCE0 2579 aa0.19□□□□□ -2.38
PDCD10-214ENST00000487947 SSPOA2VEC9 5147 aa0.18□□□□□ -2.38
PDCD10-214ENST00000487947 TGP01266 2768 aa0.17□□□□□ -2.38
PDCD10-214ENST00000487947 TLN2Q9Y4G6 2542 aa0.16□□□□□ -2.38
PDCD10-214ENST00000487947 WDR87Q6ZQQ6 2873 aa0.16□□□□□ -2.38
PDCD10-214ENST00000487947 DNHD1Q96M86 4753 aa0.15□□□□□ -2.38
PDCD10-214ENST00000487947 USH2AO75445 5202 aa0.15□□□□□ -2.38
PDCD10-214ENST00000487947 SMG1Q96Q15 3661 aaKnown RBP0.15□□□□□ -2.39
PDCD10-214ENST00000487947 MUC2Q02817 5179 aa0.15□□□□□ -2.39
PDCD10-214ENST00000487947 FLNAP21333 2647 aaKnown RBP0.15□□□□□ -2.39
PDCD10-214ENST00000487947 MXRA5Q9NR99 2828 aa0.14□□□□□ -2.39
PDCD10-214ENST00000487947 K7EIM0 57 aa0.14□□□□□ -2.39
PDCD10-214ENST00000487947 UBR4Q5T4S7 5183 aa0.14□□□□□ -2.39
PDCD10-214ENST00000487947 USP9XQ93008 2570 aaPredicted RBP0.12□□□□□ -2.39
PDCD10-214ENST00000487947 MGAQ8IWI9 3026 aa0.12□□□□□ -2.39
PDCD10-214ENST00000487947 ADGRG4Q8IZF6 3080 aa0.12□□□□□ -2.39
PDCD10-214ENST00000487947 CFAP54Q96N23 3096 aa0.11□□□□□ -2.39
PDCD10-214ENST00000487947 ITPR1Q14643 2758 aa0.1□□□□□ -2.39
PDCD10-214ENST00000487947 MGAM2Q2M2H8 2515 aa0.1□□□□□ -2.39
PDCD10-214ENST00000487947 DEFB1P60022 68 aa0.1□□□□□ -2.39
PDCD10-214ENST00000487947 RYR1P21817 5038 aa0.1□□□□□ -2.39
PDCD10-214ENST00000487947 LAMA3Q16787 3333 aa0.1□□□□□ -2.39
PDCD10-214ENST00000487947 NBEAL1Q6ZS30 2694 aa0.1□□□□□ -2.39
PDCD10-214ENST00000487947 VPS13CQ709C8 3753 aa0.09□□□□□ -2.39
PDCD10-214ENST00000487947 DMXL2Q8TDJ6 3036 aa0.09□□□□□ -2.39
PDCD10-214ENST00000487947 A0A096LNI7 61 aa0.09□□□□□ -2.4
PDCD10-214ENST00000487947 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
PDCD10-214ENST00000487947 DSTQ03001 7570 aaKnown RBP0.08□□□□□ -2.4
PDCD10-214ENST00000487947 TMEM167AQ8TBQ9 72 aa0.08□□□□□ -2.4
PDCD10-214ENST00000487947 DMDP11532 3685 aa0.08□□□□□ -2.4
PDCD10-214ENST00000487947 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
PDCD10-214ENST00000487947 C5orf42Q9H799 3197 aa0.06□□□□□ -2.4
PDCD10-214ENST00000487947 STAB2Q8WWQ8 2551 aa0.05□□□□□ -2.4
PDCD10-214ENST00000487947 RPL39P5Q59GN2 51 aa0.05□□□□□ -2.4
PDCD10-214ENST00000487947 CSMD2Q7Z408 3487 aa0.04□□□□□ -2.4
PDCD10-214ENST00000487947 RHPN1-AS1Q9BWJ2 59 aa0.04□□□□□ -2.4
PDCD10-214ENST00000487947 MT1HP80294 61 aa0.03□□□□□ -2.4
PDCD10-214ENST00000487947 KRTAP19-7Q3SYF9 63 aa0.03□□□□□ -2.4
PDCD10-214ENST00000487947 ATMQ13315 3056 aa0.03□□□□□ -2.4
PDCD10-214ENST00000487947 SRCAPQ6ZRS2 3230 aa0.03□□□□□ -2.41
PDCD10-214ENST00000487947 LRBAP50851 2863 aa0.02□□□□□ -2.41
PDCD10-214ENST00000487947 DEFB136Q30KP8 78 aa0.02□□□□□ -2.41
PDCD10-214ENST00000487947 SPTAN1Q13813 2472 aaKnown RBP0.02□□□□□ -2.41
PDCD10-214ENST00000487947 DEFB108AA8MXU0 73 aa0.01□□□□□ -2.41
PDCD10-214ENST00000487947 MT1EP04732 61 aa0.01□□□□□ -2.41
PDCD10-214ENST00000487947 TEX15Q9BXT5 2789 aa0□□□□□ -2.41
PDCD10-214ENST00000487947 DOPEY1Q5JWR5 2465 aa-0.01□□□□□ -2.41
PDCD10-214ENST00000487947 SZT2Q5T011 3432 aa-0.01□□□□□ -2.41
PDCD10-214ENST00000487947 HERC2O95714 4834 aa-0.02□□□□□ -2.41
PDCD10-214ENST00000487947 KRTAP19-8Q3LI54 63 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms