RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 C9orf116Q5BN46 136 aaPredicted RBP1.27□□□□□ -2.21
TTC3-220ENST00000487711 Q6ZRN7 208 aaPredicted RBP1.27□□□□□ -2.21
TTC3-220ENST00000487711 C20orf197Q8N268 126 aa1.27□□□□□ -2.21
TTC3-220ENST00000487711 TMEM254Q8TBM7 123 aa1.27□□□□□ -2.21
TTC3-220ENST00000487711 LIMD2Q9BT23 127 aa1.27□□□□□ -2.21
TTC3-220ENST00000487711 CYSTM1Q9H1C7 97 aa1.27□□□□□ -2.21
TTC3-220ENST00000487711 DNAH9Q9NYC9 4486 aa1.27□□□□□ -2.21
TTC3-220ENST00000487711 DNAH6Q9C0G6 4158 aa1.27□□□□□ -2.21
TTC3-220ENST00000487711 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
TTC3-220ENST00000487711 PLECQ15149 4684 aaKnown RBP1.26□□□□□ -2.21
TTC3-220ENST00000487711 VPS13DQ5THJ4 4388 aa1.26□□□□□ -2.21
TTC3-220ENST00000487711 HCG22E2RYF7 251 aa1.26□□□□□ -2.21
TTC3-220ENST00000487711 C1orf137Q5JT78 98 aa1.26□□□□□ -2.21
TTC3-220ENST00000487711 RYR2Q92736 4967 aa1.26□□□□□ -2.21
TTC3-220ENST00000487711 LYSTQ99698 3801 aa1.26□□□□□ -2.21
TTC3-220ENST00000487711 KMT2CQ8NEZ4 4911 aaKnown RBP1.26□□□□□ -2.21
TTC3-220ENST00000487711 PRKDCP78527 4128 aaKnown RBP1.25□□□□□ -2.21
TTC3-220ENST00000487711 HECTD4Q9Y4D8 3996 aa1.25□□□□□ -2.21
TTC3-220ENST00000487711 LOC101927531A0A1B0GV80 90 aa1.25□□□□□ -2.21
TTC3-220ENST00000487711 NUPR2A6NF83 97 aa1.25□□□□□ -2.21
TTC3-220ENST00000487711 DEFB4AO15263 64 aa1.25□□□□□ -2.21
TTC3-220ENST00000487711 HTN3P15516 51 aa1.25□□□□□ -2.21
TTC3-220ENST00000487711 CASC2Q6XLA1 102 aa1.25□□□□□ -2.21
TTC3-220ENST00000487711 SMR3AQ99954 134 aa1.25□□□□□ -2.21
TTC3-220ENST00000487711 TP53AIP1Q9HCN2 124 aa1.25□□□□□ -2.21
TTC3-220ENST00000487711 DNAH17Q9UFH2 4485 aa1.25□□□□□ -2.21
TTC3-220ENST00000487711 TRAV22A0A0B4J277 110 aa1.24□□□□□ -2.21
TTC3-220ENST00000487711 M0R2N4 97 aa1.24□□□□□ -2.21
TTC3-220ENST00000487711 Q5VV11 94 aa1.24□□□□□ -2.21
TTC3-220ENST00000487711 DNAH10Q8IVF4 4471 aa1.24□□□□□ -2.21
TTC3-220ENST00000487711 DNAH8Q96JB1 4490 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 CSMD3Q7Z407 3707 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 DNAH2Q9P225 4427 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 NBDYA0A0U1RRE5 68 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 K7EIL1 84 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 COA5Q86WW8 74 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 LINC00472Q9H8W2 130 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 APLNQ9ULZ1 77 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 COL7A1Q02388 2944 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 ABCA13Q86UQ4 5058 aa1.23□□□□□ -2.21
TTC3-220ENST00000487711 TENM2Q9NT68 2774 aa1.22□□□□□ -2.21
TTC3-220ENST00000487711 A0A096LNI7 61 aa1.22□□□□□ -2.21
TTC3-220ENST00000487711 K7EQZ3 153 aa1.22□□□□□ -2.21
TTC3-220ENST00000487711 Q6ZSA8 131 aa1.22□□□□□ -2.21
TTC3-220ENST00000487711 UBE2DNLQ8IWF7 75 aa1.22□□□□□ -2.21
TTC3-220ENST00000487711 PLAC8Q9NZF1 115 aa1.22□□□□□ -2.21
TTC3-220ENST00000487711 STARD9Q9P2P6 4700 aa1.22□□□□□ -2.21
TTC3-220ENST00000487711 ALMS1Q8TCU4 4167 aa1.22□□□□□ -2.21
TTC3-220ENST00000487711 SSBP3-AS1Q7Z2R9 100 aa1.21□□□□□ -2.22
TTC3-220ENST00000487711 SPTSSBQ8NFR3 76 aa1.21□□□□□ -2.22
TTC3-220ENST00000487711 SNURFQ9Y675 71 aa1.21□□□□□ -2.22
TTC3-220ENST00000487711 MEGF8Q7Z7M0 2845 aa1.21□□□□□ -2.22
TTC3-220ENST00000487711 DNAH5Q8TE73 4624 aa1.21□□□□□ -2.22
TTC3-220ENST00000487711 DNAH11Q96DT5 4516 aa1.2□□□□□ -2.22
TTC3-220ENST00000487711 MMP24-AS1A0A0U1RRL7 71 aa1.2□□□□□ -2.22
TTC3-220ENST00000487711 H0Y9P7 68 aa1.2□□□□□ -2.22
TTC3-220ENST00000487711 CHKB-CPT1BH3BT56 60 aa1.2□□□□□ -2.22
TTC3-220ENST00000487711 RPS29P62273 56 aaKnown RBP1.2□□□□□ -2.22
TTC3-220ENST00000487711 PRLHP81277 87 aa1.2□□□□□ -2.22
TTC3-220ENST00000487711 DEFB105AQ8NG35 78 aa1.2□□□□□ -2.22
TTC3-220ENST00000487711 LINC00208Q96KT6 92 aa1.2□□□□□ -2.22
TTC3-220ENST00000487711 HERC1Q15751 4861 aa1.2□□□□□ -2.22
TTC3-220ENST00000487711 FLG2Q5D862 2391 aaPredicted RBP1.2□□□□□ -2.22
TTC3-220ENST00000487711 A0A087WTM6 91 aa1.19□□□□□ -2.22
TTC3-220ENST00000487711 MIR22HGQ0VDD5 57 aa1.19□□□□□ -2.22
TTC3-220ENST00000487711 DMAC1Q96GE9 116 aa1.19□□□□□ -2.22
TTC3-220ENST00000487711 Q96NJ1 140 aa1.19□□□□□ -2.22
TTC3-220ENST00000487711 MRPL34Q9BQ48 92 aaKnown RBP1.19□□□□□ -2.22
TTC3-220ENST00000487711 SRRM2Q9UQ35 2752 aaKnown RBP1.19□□□□□ -2.22
TTC3-220ENST00000487711 HERC2O95714 4834 aa1.19□□□□□ -2.22
TTC3-220ENST00000487711 FRAS1Q86XX4 4008 aa1.18□□□□□ -2.22
TTC3-220ENST00000487711 TGP01266 2768 aa1.18□□□□□ -2.22
TTC3-220ENST00000487711 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
TTC3-220ENST00000487711 FAT2Q9NYQ8 4349 aa1.17□□□□□ -2.22
TTC3-220ENST00000487711 WFDC13Q8IUB5 93 aa1.17□□□□□ -2.22
TTC3-220ENST00000487711 SACSQ9NZJ4 4579 aa1.16□□□□□ -2.22
TTC3-220ENST00000487711 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
TTC3-220ENST00000487711 KMT2AQ03164 3969 aa1.16□□□□□ -2.22
TTC3-220ENST00000487711 PKD1P98161 4303 aa1.16□□□□□ -2.22
TTC3-220ENST00000487711 INE1O15225 51 aa1.16□□□□□ -2.22
TTC3-220ENST00000487711 SPINK1P00995 79 aa1.16□□□□□ -2.22
TTC3-220ENST00000487711 ACYP2P14621 99 aa1.16□□□□□ -2.22
TTC3-220ENST00000487711 SPAG11AQ6PDA7 123 aa1.16□□□□□ -2.22
TTC3-220ENST00000487711 PRR15LQ9BU68 103 aa1.16□□□□□ -2.22
TTC3-220ENST00000487711 APOBP04114 4563 aaKnown RBP1.16□□□□□ -2.22
TTC3-220ENST00000487711 LRP1BQ9NZR2 4599 aa1.15□□□□□ -2.22
TTC3-220ENST00000487711 UQCR11O14957 56 aa1.15□□□□□ -2.23
TTC3-220ENST00000487711 VPS13BQ7Z7G8 4022 aa1.15□□□□□ -2.23
TTC3-220ENST00000487711 DYNC1H1Q14204 4646 aaKnown RBP1.14□□□□□ -2.23
TTC3-220ENST00000487711 PKHD1P08F94 4074 aa1.14□□□□□ -2.23
TTC3-220ENST00000487711 CSAG1Q6PB30 78 aa1.14□□□□□ -2.23
TTC3-220ENST00000487711 SPINK6Q6UWN8 80 aa1.14□□□□□ -2.23
TTC3-220ENST00000487711 FAT4Q6V0I7 4981 aa1.13□□□□□ -2.23
TTC3-220ENST00000487711 SPATA8Q6RVD6 105 aa1.13□□□□□ -2.23
TTC3-220ENST00000487711 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
TTC3-220ENST00000487711 FSIP2Q5CZC0 6907 aa1.12□□□□□ -2.23
TTC3-220ENST00000487711 A0A1B0GU69 56 aa1.11□□□□□ -2.23
TTC3-220ENST00000487711 LY6G6CO95867 125 aa1.11□□□□□ -2.23
TTC3-220ENST00000487711 SYNE2Q8WXH0 6885 aaKnown RBP1.1□□□□□ -2.23
TTC3-220ENST00000487711 TNXBP22105 4242 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms