RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
PTCD2-204ENST00000486995 COX6B2Q6YFQ2 88 aa6.48□□□□□ -1.37
PTCD2-204ENST00000486995 Q5VSD8 79 aa6.47□□□□□ -1.37
PTCD2-204ENST00000486995 RYR1P21817 5038 aa6.45□□□□□ -1.38
PTCD2-204ENST00000486995 RYR3Q15413 4870 aa6.45□□□□□ -1.38
PTCD2-204ENST00000486995 H0YAA0 97 aa6.43□□□□□ -1.38
PTCD2-204ENST00000486995 KRTAP17-1Q9BYP8 105 aa6.42□□□□□ -1.38
PTCD2-204ENST00000486995 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
PTCD2-204ENST00000486995 A0A1B0GU33 70 aa6.41□□□□□ -1.38
PTCD2-204ENST00000486995 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
PTCD2-204ENST00000486995 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.39
PTCD2-204ENST00000486995 H1FX-AS1Q4G0G2 97 aa6.39□□□□□ -1.39
PTCD2-204ENST00000486995 XP32Q5T750 250 aa6.38□□□□□ -1.39
PTCD2-204ENST00000486995 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
PTCD2-204ENST00000486995 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
PTCD2-204ENST00000486995 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
PTCD2-204ENST00000486995 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
PTCD2-204ENST00000486995 S4R3F8 94 aa6.24□□□□□ -1.41
PTCD2-204ENST00000486995 LPAP08519 4548 aa6.22□□□□□ -1.41
PTCD2-204ENST00000486995 EPPK1P58107 5090 aaKnown RBP6.21□□□□□ -1.41
PTCD2-204ENST00000486995 LRP2P98164 4655 aa6.19□□□□□ -1.42
PTCD2-204ENST00000486995 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
PTCD2-204ENST00000486995 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
PTCD2-204ENST00000486995 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
PTCD2-204ENST00000486995 K7ERS5 55 aa6.15□□□□□ -1.43
PTCD2-204ENST00000486995 P0C880 135 aa6.13□□□□□ -1.43
PTCD2-204ENST00000486995 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
PTCD2-204ENST00000486995 A0A0D9SG42 100 aa6.1□□□□□ -1.43
PTCD2-204ENST00000486995 ROMO1P60602 79 aa6.09□□□□□ -1.44
PTCD2-204ENST00000486995 KRTAP4-5Q9BYR2 181 aa6.08□□□□□ -1.44
PTCD2-204ENST00000486995 CRIPTQ9P021 101 aa6.01□□□□□ -1.45
PTCD2-204ENST00000486995 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
PTCD2-204ENST00000486995 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
PTCD2-204ENST00000486995 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
PTCD2-204ENST00000486995 LCE2CQ5TA81 110 aa5.95□□□□□ -1.46
PTCD2-204ENST00000486995 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
PTCD2-204ENST00000486995 M0QZ58 72 aa5.93□□□□□ -1.46
PTCD2-204ENST00000486995 SPINT4Q6UDR6 99 aa5.9□□□□□ -1.47
PTCD2-204ENST00000486995 LCE2AQ5TA79 106 aaPredicted RBP5.89□□□□□ -1.47
PTCD2-204ENST00000486995 KRTAP4-1Q9BYQ7 146 aa5.88□□□□□ -1.47
PTCD2-204ENST00000486995 LCE2BO14633 110 aa5.88□□□□□ -1.47
PTCD2-204ENST00000486995 HERC2O95714 4834 aa5.87□□□□□ -1.47
PTCD2-204ENST00000486995 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
PTCD2-204ENST00000486995 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
PTCD2-204ENST00000486995 R4GN34 69 aa5.78□□□□□ -1.48
PTCD2-204ENST00000486995 LORP23490 312 aaPredicted RBP5.77□□□□□ -1.49
PTCD2-204ENST00000486995 MUC2Q02817 5179 aa5.71□□□□□ -1.5
PTCD2-204ENST00000486995 BIRC6Q9NR09 4857 aa5.7□□□□□ -1.5
PTCD2-204ENST00000486995 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
PTCD2-204ENST00000486995 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
PTCD2-204ENST00000486995 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
PTCD2-204ENST00000486995 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
PTCD2-204ENST00000486995 HERC1Q15751 4861 aa5.59□□□□□ -1.51
PTCD2-204ENST00000486995 HMCN2Q8NDA2 5059 aa5.57□□□□□ -1.52
PTCD2-204ENST00000486995 PCLOQ9Y6V0 5065 aa5.55□□□□□ -1.52
PTCD2-204ENST00000486995 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
PTCD2-204ENST00000486995 FAT4Q6V0I7 4981 aa5.43□□□□□ -1.54
PTCD2-204ENST00000486995 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
PTCD2-204ENST00000486995 RNF213Q63HN8 5207 aa5.33□□□□□ -1.56
PTCD2-204ENST00000486995 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
PTCD2-204ENST00000486995 UBR4Q5T4S7 5183 aa5.31□□□□□ -1.56
PTCD2-204ENST00000486995 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
PTCD2-204ENST00000486995 MT1HP80294 61 aa5.29□□□□□ -1.56
PTCD2-204ENST00000486995 KRTAP19-1Q8IUB9 90 aa5.29□□□□□ -1.56
PTCD2-204ENST00000486995 TNP1P09430 55 aa5.27□□□□□ -1.57
PTCD2-204ENST00000486995 M0R2T5 61 aa5.27□□□□□ -1.57
PTCD2-204ENST00000486995 MT2AP02795 61 aa5.2□□□□□ -1.58
PTCD2-204ENST00000486995 MT1FP04733 61 aa5.2□□□□□ -1.58
PTCD2-204ENST00000486995 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
PTCD2-204ENST00000486995 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
PTCD2-204ENST00000486995 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
PTCD2-204ENST00000486995 KRTAP19-8Q3LI54 63 aa5.08□□□□□ -1.6
PTCD2-204ENST00000486995 MT1BP07438 61 aa5.02□□□□□ -1.61
PTCD2-204ENST00000486995 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
PTCD2-204ENST00000486995 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
PTCD2-204ENST00000486995 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
PTCD2-204ENST00000486995 MT1XP80297 61 aa4.97□□□□□ -1.61
PTCD2-204ENST00000486995 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
PTCD2-204ENST00000486995 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
PTCD2-204ENST00000486995 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
PTCD2-204ENST00000486995 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
PTCD2-204ENST00000486995 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
PTCD2-204ENST00000486995 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
PTCD2-204ENST00000486995 USH2AO75445 5202 aa4.71□□□□□ -1.66
PTCD2-204ENST00000486995 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
PTCD2-204ENST00000486995 KMT2DO14686 5537 aa4.6□□□□□ -1.67
PTCD2-204ENST00000486995 INE1O15225 51 aa4.58□□□□□ -1.68
PTCD2-204ENST00000486995 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
PTCD2-204ENST00000486995 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
PTCD2-204ENST00000486995 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
PTCD2-204ENST00000486995 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
PTCD2-204ENST00000486995 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
PTCD2-204ENST00000486995 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
PTCD2-204ENST00000486995 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
PTCD2-204ENST00000486995 MT1EP04732 61 aa4.3□□□□□ -1.72
PTCD2-204ENST00000486995 MT1LQ93083 61 aa4.29□□□□□ -1.72
PTCD2-204ENST00000486995 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
PTCD2-204ENST00000486995 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
PTCD2-204ENST00000486995 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
PTCD2-204ENST00000486995 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms