RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
NUP50-216ENST00000486184 MT1HP80294 61 aa5.72□□□□□ -1.49
NUP50-216ENST00000486184 C5orf47Q569G3 176 aa5.71□□□□□ -1.5
NUP50-216ENST00000486184 SMIM20Q8N5G0 67 aa5.71□□□□□ -1.5
NUP50-216ENST00000486184 C4orf26Q17RF5 130 aa5.7□□□□□ -1.5
NUP50-216ENST00000486184 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
NUP50-216ENST00000486184 CYP4F30PQ9H0H9 118 aa5.7□□□□□ -1.5
NUP50-216ENST00000486184 LINC00208Q96KT6 92 aa5.69□□□□□ -1.5
NUP50-216ENST00000486184 H3BPC8 53 aa5.67□□□□□ -1.5
NUP50-216ENST00000486184 TRAV7A0A075B6U4 112 aa5.65□□□□□ -1.5
NUP50-216ENST00000486184 H1FX-AS1Q4G0G2 97 aa5.65□□□□□ -1.5
NUP50-216ENST00000486184 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
NUP50-216ENST00000486184 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
NUP50-216ENST00000486184 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.51
NUP50-216ENST00000486184 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
NUP50-216ENST00000486184 KLKP1Q107X0 134 aa5.58□□□□□ -1.52
NUP50-216ENST00000486184 SERP2Q8N6R1 65 aa5.57□□□□□ -1.52
NUP50-216ENST00000486184 S4R3F8 94 aa5.55□□□□□ -1.52
NUP50-216ENST00000486184 A8MUN3 132 aa5.53□□□□□ -1.52
NUP50-216ENST00000486184 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
NUP50-216ENST00000486184 SNURFQ9Y675 71 aa5.51□□□□□ -1.53
NUP50-216ENST00000486184 LCA10Q71F78 164 aa5.48□□□□□ -1.53
NUP50-216ENST00000486184 COX7CP15954 63 aa5.47□□□□□ -1.53
NUP50-216ENST00000486184 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
NUP50-216ENST00000486184 ANAPC13Q9BS18 74 aa5.47□□□□□ -1.53
NUP50-216ENST00000486184 DMAC1Q96GE9 116 aa5.45□□□□□ -1.54
NUP50-216ENST00000486184 NDUFC1O43677 76 aa5.44□□□□□ -1.54
NUP50-216ENST00000486184 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
NUP50-216ENST00000486184 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
NUP50-216ENST00000486184 MT2AP02795 61 aa5.41□□□□□ -1.54
NUP50-216ENST00000486184 ACYP2P14621 99 aa5.41□□□□□ -1.54
NUP50-216ENST00000486184 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
NUP50-216ENST00000486184 SPANXA2-OT1Q8N9U9 137 aa5.39□□□□□ -1.55
NUP50-216ENST00000486184 MT1FP04733 61 aa5.37□□□□□ -1.55
NUP50-216ENST00000486184 CHKB-CPT1BH3BT56 60 aa5.35□□□□□ -1.55
NUP50-216ENST00000486184 SPTSSBQ8NFR3 76 aa5.33□□□□□ -1.56
NUP50-216ENST00000486184 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
NUP50-216ENST00000486184 CCDC179H3BU77 68 aa5.3□□□□□ -1.56
NUP50-216ENST00000486184 H7BZZ5 65 aa5.3□□□□□ -1.56
NUP50-216ENST00000486184 CYSTM1Q9H1C7 97 aa5.29□□□□□ -1.56
NUP50-216ENST00000486184 CRCT1Q9UGL9 99 aa5.27□□□□□ -1.57
NUP50-216ENST00000486184 H0YAA0 97 aa5.26□□□□□ -1.57
NUP50-216ENST00000486184 ADM2Q7Z4H4 148 aa5.24□□□□□ -1.57
NUP50-216ENST00000486184 COA5Q86WW8 74 aa5.23□□□□□ -1.57
NUP50-216ENST00000486184 ATP5EP56381 51 aaPredicted RBP5.2□□□□□ -1.58
NUP50-216ENST00000486184 CRIPTQ9P021 101 aa5.2□□□□□ -1.58
NUP50-216ENST00000486184 TMEM258P61165 79 aa5.16□□□□□ -1.58
NUP50-216ENST00000486184 P0C880 135 aa5.12□□□□□ -1.59
NUP50-216ENST00000486184 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
NUP50-216ENST00000486184 R4GN34 69 aa5.12□□□□□ -1.59
NUP50-216ENST00000486184 SEC61GP60059 68 aa5.1□□□□□ -1.59
NUP50-216ENST00000486184 USH2AO75445 5202 aa5.1□□□□□ -1.59
NUP50-216ENST00000486184 M0QZ58 72 aa5.08□□□□□ -1.6
NUP50-216ENST00000486184 Q5VV11 94 aa5.08□□□□□ -1.6
NUP50-216ENST00000486184 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
NUP50-216ENST00000486184 SERP1Q9Y6X1 66 aa5.07□□□□□ -1.6
NUP50-216ENST00000486184 PCP4P48539 62 aa5.04□□□□□ -1.6
NUP50-216ENST00000486184 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
NUP50-216ENST00000486184 A0A1B0GU69 56 aa5□□□□□ -1.61
NUP50-216ENST00000486184 LINC01554Q52M75 96 aa5□□□□□ -1.61
NUP50-216ENST00000486184 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
NUP50-216ENST00000486184 MT1BP07438 61 aa4.98□□□□□ -1.61
NUP50-216ENST00000486184 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
NUP50-216ENST00000486184 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
NUP50-216ENST00000486184 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
NUP50-216ENST00000486184 A0A1B0GU33 70 aa4.93□□□□□ -1.62
NUP50-216ENST00000486184 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
NUP50-216ENST00000486184 A6NN06 94 aa4.89□□□□□ -1.63
NUP50-216ENST00000486184 KRTAP13-4Q3LI77 160 aa4.88□□□□□ -1.63
NUP50-216ENST00000486184 SPATA8Q6RVD6 105 aa4.86□□□□□ -1.63
NUP50-216ENST00000486184 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
NUP50-216ENST00000486184 V9GYY9 64 aa4.85□□□□□ -1.63
NUP50-216ENST00000486184 A0A0D9SG42 100 aa4.83□□□□□ -1.64
NUP50-216ENST00000486184 KRTAP10-5P60370 271 aa4.83□□□□□ -1.64
NUP50-216ENST00000486184 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
NUP50-216ENST00000486184 SMIM26A0A096LP01 95 aa4.81□□□□□ -1.64
NUP50-216ENST00000486184 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
NUP50-216ENST00000486184 Q1T7F1 81 aa4.78□□□□□ -1.64
NUP50-216ENST00000486184 UQCR11O14957 56 aa4.77□□□□□ -1.65
NUP50-216ENST00000486184 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
NUP50-216ENST00000486184 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
NUP50-216ENST00000486184 PSPHP1O15172 72 aa4.75□□□□□ -1.65
NUP50-216ENST00000486184 MT1XP80297 61 aa4.75□□□□□ -1.65
NUP50-216ENST00000486184 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
NUP50-216ENST00000486184 A8MU10 97 aa4.72□□□□□ -1.65
NUP50-216ENST00000486184 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
NUP50-216ENST00000486184 MIR22HGQ0VDD5 57 aa4.68□□□□□ -1.66
NUP50-216ENST00000486184 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
NUP50-216ENST00000486184 KRTAP12-2P59991 146 aa4.67□□□□□ -1.66
NUP50-216ENST00000486184 MACF1Q9UPN3 7388 aaKnown RBP4.66□□□□□ -1.66
NUP50-216ENST00000486184 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
NUP50-216ENST00000486184 NEBP20929 6669 aa4.65□□□□□ -1.67
NUP50-216ENST00000486184 A6NED7 52 aa4.63□□□□□ -1.67
NUP50-216ENST00000486184 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
NUP50-216ENST00000486184 K7ERS5 55 aa4.6□□□□□ -1.67
NUP50-216ENST00000486184 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
NUP50-216ENST00000486184 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
NUP50-216ENST00000486184 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
NUP50-216ENST00000486184 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
NUP50-216ENST00000486184 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms