RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 ACYP2P14621 99 aa9.81□□□□□ -0.84
NECTIN3-206ENST00000485303 LCA10Q71F78 164 aa9.79□□□□□ -0.84
NECTIN3-206ENST00000485303 LPAP08519 4548 aa9.77□□□□□ -0.85
NECTIN3-206ENST00000485303 LRP2P98164 4655 aa9.74□□□□□ -0.85
NECTIN3-206ENST00000485303 DMAC1Q96GE9 116 aa9.7□□□□□ -0.86
NECTIN3-206ENST00000485303 PCLOQ9Y6V0 5065 aa9.7□□□□□ -0.86
NECTIN3-206ENST00000485303 SEC61BP60468 96 aaKnown RBP9.69□□□□□ -0.86
NECTIN3-206ENST00000485303 HERC1Q15751 4861 aa9.64□□□□□ -0.87
NECTIN3-206ENST00000485303 COX6B2Q6YFQ2 88 aa9.61□□□□□ -0.87
NECTIN3-206ENST00000485303 CDC42SE1Q9NRR8 79 aa9.58□□□□□ -0.88
NECTIN3-206ENST00000485303 A6NN06 94 aa9.55□□□□□ -0.88
NECTIN3-206ENST00000485303 A0A1B0GU69 56 aa9.55□□□□□ -0.88
NECTIN3-206ENST00000485303 LINC01558Q9Y6Z2 57 aa9.53□□□□□ -0.88
NECTIN3-206ENST00000485303 KRTAP3-1Q9BYR8 98 aa9.52□□□□□ -0.89
NECTIN3-206ENST00000485303 LINC01554Q52M75 96 aa9.5□□□□□ -0.89
NECTIN3-206ENST00000485303 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
NECTIN3-206ENST00000485303 S4R3F8 94 aa9.41□□□□□ -0.9
NECTIN3-206ENST00000485303 CRIPTQ9P021 101 aa9.39□□□□□ -0.91
NECTIN3-206ENST00000485303 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
NECTIN3-206ENST00000485303 H1FX-AS1Q4G0G2 97 aa9.36□□□□□ -0.91
NECTIN3-206ENST00000485303 MIR22HGQ0VDD5 57 aa9.33□□□□□ -0.92
NECTIN3-206ENST00000485303 HMCN2Q8NDA2 5059 aa9.3□□□□□ -0.92
NECTIN3-206ENST00000485303 UQCR11O14957 56 aa9.29□□□□□ -0.92
NECTIN3-206ENST00000485303 MUC2Q02817 5179 aa9.27□□□□□ -0.93
NECTIN3-206ENST00000485303 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
NECTIN3-206ENST00000485303 UBR4Q5T4S7 5183 aa9.11□□□□□ -0.95
NECTIN3-206ENST00000485303 M0R2T5 61 aa9.1□□□□□ -0.95
NECTIN3-206ENST00000485303 RNF213Q63HN8 5207 aa9.09□□□□□ -0.95
NECTIN3-206ENST00000485303 A0A1B0GU33 70 aa9.04□□□□□ -0.96
NECTIN3-206ENST00000485303 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
NECTIN3-206ENST00000485303 SPATA8Q6RVD6 105 aa9.03□□□□□ -0.96
NECTIN3-206ENST00000485303 P0C880 135 aa8.97□□□□□ -0.97
NECTIN3-206ENST00000485303 A0A0D9SG42 100 aa8.95□□□□□ -0.98
NECTIN3-206ENST00000485303 K7ERS5 55 aa8.91□□□□□ -0.98
NECTIN3-206ENST00000485303 FAT4Q6V0I7 4981 aa8.9□□□□□ -0.98
NECTIN3-206ENST00000485303 SPINT4Q6UDR6 99 aa8.9□□□□□ -0.98
NECTIN3-206ENST00000485303 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
NECTIN3-206ENST00000485303 KRTAP19-2Q3LHN2 52 aa8.84□□□□□ -0.99
NECTIN3-206ENST00000485303 ROMO1P60602 79 aa8.84□□□□□ -0.99
NECTIN3-206ENST00000485303 KRTAP3-2Q9BYR7 98 aa8.82□□□□□ -1
NECTIN3-206ENST00000485303 A0A0A0MQY5 61 aa8.81□□□□□ -1
NECTIN3-206ENST00000485303 R4GN34 69 aa8.81□□□□□ -1
NECTIN3-206ENST00000485303 H0YAA0 97 aa8.79□□□□□ -1
NECTIN3-206ENST00000485303 M0QZ58 72 aa8.79□□□□□ -1
NECTIN3-206ENST00000485303 NDUFAF8A1L188 74 aa8.77□□□□□ -1.01
NECTIN3-206ENST00000485303 LCE2CQ5TA81 110 aa8.73□□□□□ -1.01
NECTIN3-206ENST00000485303 KRTAP13-4Q3LI77 160 aa8.72□□□□□ -1.01
NECTIN3-206ENST00000485303 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
NECTIN3-206ENST00000485303 MT1HP80294 61 aa8.68□□□□□ -1.02
NECTIN3-206ENST00000485303 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
NECTIN3-206ENST00000485303 KRTAP25-1Q3LHN0 102 aa8.65□□□□□ -1.03
NECTIN3-206ENST00000485303 KRTAP10-10P60014 251 aa8.58□□□□□ -1.04
NECTIN3-206ENST00000485303 C10orf95Q9H7T3 257 aa8.52□□□□□ -1.05
NECTIN3-206ENST00000485303 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
NECTIN3-206ENST00000485303 CAMK2N1Q7Z7J9 78 aa8.38□□□□□ -1.07
NECTIN3-206ENST00000485303 MT2AP02795 61 aa8.37□□□□□ -1.07
NECTIN3-206ENST00000485303 KRTAP12-1P59990 96 aa8.36□□□□□ -1.07
NECTIN3-206ENST00000485303 MT1FP04733 61 aa8.35□□□□□ -1.07
NECTIN3-206ENST00000485303 KRTAP9-8Q9BYQ0 159 aa8.28□□□□□ -1.08
NECTIN3-206ENST00000485303 LUZP6Q538Z0 58 aa8.23□□□□□ -1.09
NECTIN3-206ENST00000485303 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
NECTIN3-206ENST00000485303 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
NECTIN3-206ENST00000485303 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
NECTIN3-206ENST00000485303 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
NECTIN3-206ENST00000485303 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
NECTIN3-206ENST00000485303 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
NECTIN3-206ENST00000485303 FSIP2Q5CZC0 6907 aa7.86□□□□□ -1.15
NECTIN3-206ENST00000485303 MT1BP07438 61 aa7.83□□□□□ -1.16
NECTIN3-206ENST00000485303 LCE2BO14633 110 aa7.83□□□□□ -1.16
NECTIN3-206ENST00000485303 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
NECTIN3-206ENST00000485303 USH2AO75445 5202 aa7.81□□□□□ -1.16
NECTIN3-206ENST00000485303 TNP1P09430 55 aa7.79□□□□□ -1.16
NECTIN3-206ENST00000485303 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
NECTIN3-206ENST00000485303 MT1XP80297 61 aa7.61□□□□□ -1.19
NECTIN3-206ENST00000485303 KRTAP10-5P60370 271 aa7.58□□□□□ -1.2
NECTIN3-206ENST00000485303 KRTAP10-7P60409 375 aaPredicted RBP7.42□□□□□ -1.22
NECTIN3-206ENST00000485303 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
NECTIN3-206ENST00000485303 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
NECTIN3-206ENST00000485303 KRTAP10-12P60413 245 aa7.4□□□□□ -1.22
NECTIN3-206ENST00000485303 SSPOA2VEC9 5147 aa7.38□□□□□ -1.23
NECTIN3-206ENST00000485303 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
NECTIN3-206ENST00000485303 KMT2DO14686 5537 aa7.27□□□□□ -1.25
NECTIN3-206ENST00000485303 KRTAP9-2Q9BYQ4 174 aa7.25□□□□□ -1.25
NECTIN3-206ENST00000485303 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.25
NECTIN3-206ENST00000485303 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.25
NECTIN3-206ENST00000485303 KRTAP19-6Q3LI70 58 aa7.19□□□□□ -1.26
NECTIN3-206ENST00000485303 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
NECTIN3-206ENST00000485303 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
NECTIN3-206ENST00000485303 FCGBPQ9Y6R7 5405 aaPredicted RBP7.08□□□□□ -1.28
NECTIN3-206ENST00000485303 KRTAP8-1Q8IUC2 63 aa7.03□□□□□ -1.28
NECTIN3-206ENST00000485303 KRTAP19-5Q3LI72 72 aa7.03□□□□□ -1.28
NECTIN3-206ENST00000485303 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.29
NECTIN3-206ENST00000485303 MACF1Q9UPN3 7388 aaKnown RBP6.86□□□□□ -1.31
NECTIN3-206ENST00000485303 SPRR2FQ96RM1 72 aa6.76□□□□□ -1.33
NECTIN3-206ENST00000485303 KRTAP19-7Q3SYF9 63 aa6.75□□□□□ -1.33
NECTIN3-206ENST00000485303 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
NECTIN3-206ENST00000485303 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.34
NECTIN3-206ENST00000485303 MT1EP04732 61 aa6.66□□□□□ -1.34
NECTIN3-206ENST00000485303 KRTAP9-6A0A140TA67 174 aa6.64□□□□□ -1.35
NECTIN3-206ENST00000485303 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 199.5 ms