RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ACYP2P14621 99 aa7.13□□□□□ -1.27
LRIF1-202ENST00000485275 LCE2BO14633 110 aa7.12□□□□□ -1.27
LRIF1-202ENST00000485275 LCA10Q71F78 164 aa7.12□□□□□ -1.27
LRIF1-202ENST00000485275 COA5Q86WW8 74 aa7.11□□□□□ -1.27
LRIF1-202ENST00000485275 MT1HP80294 61 aa7.1□□□□□ -1.27
LRIF1-202ENST00000485275 S4R3F8 94 aa7.09□□□□□ -1.27
LRIF1-202ENST00000485275 CHKB-CPT1BH3BT56 60 aa7.01□□□□□ -1.29
LRIF1-202ENST00000485275 SERP1Q9Y6X1 66 aa7.01□□□□□ -1.29
LRIF1-202ENST00000485275 LCE2AQ5TA79 106 aaPredicted RBP6.97□□□□□ -1.29
LRIF1-202ENST00000485275 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
LRIF1-202ENST00000485275 M0R2T5 61 aa6.91□□□□□ -1.3
LRIF1-202ENST00000485275 RPS28P62857 69 aaKnown RBP6.89□□□□□ -1.31
LRIF1-202ENST00000485275 SPTSSBQ8NFR3 76 aa6.86□□□□□ -1.31
LRIF1-202ENST00000485275 KRTAP10-6P60371 365 aaPredicted RBP6.85□□□□□ -1.31
LRIF1-202ENST00000485275 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
LRIF1-202ENST00000485275 LOC100996750A0A140TA64 210 aa6.82□□□□□ -1.32
LRIF1-202ENST00000485275 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
LRIF1-202ENST00000485275 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
LRIF1-202ENST00000485275 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
LRIF1-202ENST00000485275 H0YAA0 97 aa6.77□□□□□ -1.33
LRIF1-202ENST00000485275 MT2AP02795 61 aa6.77□□□□□ -1.33
LRIF1-202ENST00000485275 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
LRIF1-202ENST00000485275 P0C880 135 aa6.76□□□□□ -1.33
LRIF1-202ENST00000485275 LINC01558Q9Y6Z2 57 aa6.75□□□□□ -1.33
LRIF1-202ENST00000485275 MT1FP04733 61 aa6.74□□□□□ -1.33
LRIF1-202ENST00000485275 Q1T7F1 81 aa6.72□□□□□ -1.33
LRIF1-202ENST00000485275 A0A1B0GU69 56 aa6.69□□□□□ -1.34
LRIF1-202ENST00000485275 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
LRIF1-202ENST00000485275 PSPHP1O15172 72 aa6.64□□□□□ -1.35
LRIF1-202ENST00000485275 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
LRIF1-202ENST00000485275 V9GYY9 64 aa6.64□□□□□ -1.35
LRIF1-202ENST00000485275 SEC61GP60059 68 aa6.63□□□□□ -1.35
LRIF1-202ENST00000485275 Q5VV11 94 aa6.61□□□□□ -1.35
LRIF1-202ENST00000485275 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.35
LRIF1-202ENST00000485275 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
LRIF1-202ENST00000485275 A0A1B0GU33 70 aa6.55□□□□□ -1.36
LRIF1-202ENST00000485275 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
LRIF1-202ENST00000485275 M0QZ58 72 aa6.52□□□□□ -1.37
LRIF1-202ENST00000485275 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
LRIF1-202ENST00000485275 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
LRIF1-202ENST00000485275 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
LRIF1-202ENST00000485275 R4GN34 69 aa6.51□□□□□ -1.37
LRIF1-202ENST00000485275 UQCR11O14957 56 aa6.44□□□□□ -1.38
LRIF1-202ENST00000485275 A8MU10 97 aa6.41□□□□□ -1.38
LRIF1-202ENST00000485275 LINC01554Q52M75 96 aa6.41□□□□□ -1.38
LRIF1-202ENST00000485275 A6NED7 52 aa6.39□□□□□ -1.39
LRIF1-202ENST00000485275 A0A0D9SG42 100 aa6.38□□□□□ -1.39
LRIF1-202ENST00000485275 USH2AO75445 5202 aa6.37□□□□□ -1.39
LRIF1-202ENST00000485275 KRTAP19-8Q3LI54 63 aa6.37□□□□□ -1.39
LRIF1-202ENST00000485275 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
LRIF1-202ENST00000485275 MT1BP07438 61 aa6.34□□□□□ -1.39
LRIF1-202ENST00000485275 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
LRIF1-202ENST00000485275 KRTAP12-2P59991 146 aa6.28□□□□□ -1.4
LRIF1-202ENST00000485275 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
LRIF1-202ENST00000485275 A6NN06 94 aa6.26□□□□□ -1.41
LRIF1-202ENST00000485275 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
LRIF1-202ENST00000485275 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
LRIF1-202ENST00000485275 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
LRIF1-202ENST00000485275 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.41
LRIF1-202ENST00000485275 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
LRIF1-202ENST00000485275 PLAC4Q8WY50 150 aa6.16□□□□□ -1.42
LRIF1-202ENST00000485275 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
LRIF1-202ENST00000485275 MT1XP80297 61 aa6.09□□□□□ -1.43
LRIF1-202ENST00000485275 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
LRIF1-202ENST00000485275 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
LRIF1-202ENST00000485275 KRTAP19-6Q3LI70 58 aa6.05□□□□□ -1.44
LRIF1-202ENST00000485275 K7ERS5 55 aa6.02□□□□□ -1.45
LRIF1-202ENST00000485275 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
LRIF1-202ENST00000485275 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
LRIF1-202ENST00000485275 C10orf95Q9H7T3 257 aa5.97□□□□□ -1.45
LRIF1-202ENST00000485275 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
LRIF1-202ENST00000485275 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
LRIF1-202ENST00000485275 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
LRIF1-202ENST00000485275 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
LRIF1-202ENST00000485275 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
LRIF1-202ENST00000485275 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
LRIF1-202ENST00000485275 ROMO1P60602 79 aa5.83□□□□□ -1.48
LRIF1-202ENST00000485275 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
LRIF1-202ENST00000485275 KMT2DO14686 5537 aa5.79□□□□□ -1.48
LRIF1-202ENST00000485275 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
LRIF1-202ENST00000485275 TNP1P09430 55 aa5.72□□□□□ -1.49
LRIF1-202ENST00000485275 MACF1Q9UPN3 7388 aaKnown RBP5.7□□□□□ -1.5
LRIF1-202ENST00000485275 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
LRIF1-202ENST00000485275 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
LRIF1-202ENST00000485275 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
LRIF1-202ENST00000485275 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
LRIF1-202ENST00000485275 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
LRIF1-202ENST00000485275 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
LRIF1-202ENST00000485275 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
LRIF1-202ENST00000485275 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
LRIF1-202ENST00000485275 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
LRIF1-202ENST00000485275 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
LRIF1-202ENST00000485275 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
LRIF1-202ENST00000485275 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
LRIF1-202ENST00000485275 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
LRIF1-202ENST00000485275 KRTAP19-5Q3LI72 72 aa5.44□□□□□ -1.54
LRIF1-202ENST00000485275 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
LRIF1-202ENST00000485275 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
LRIF1-202ENST00000485275 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
LRIF1-202ENST00000485275 KRTAP5-9P26371 169 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms