RNA–Protein interactions for RNA: ENST00000484023.1

ATP13A3-207, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 522 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-207ENST00000484023 CELSR2Q9HCU4 2923 aa2.19□□□□□ -2.06
ATP13A3-207ENST00000484023 LRBAP50851 2863 aa2.19□□□□□ -2.06
ATP13A3-207ENST00000484023 CRYBG3Q68DQ2 2970 aa2.19□□□□□ -2.06
ATP13A3-207ENST00000484023 NBEAL1Q6ZS30 2694 aa2.18□□□□□ -2.06
ATP13A3-207ENST00000484023 NIPBLQ6KC79 2804 aaeCLIP2.18□□□□□ -2.06
ATP13A3-207ENST00000484023 COL6A5A8TX70 2615 aa2.17□□□□□ -2.06
ATP13A3-207ENST00000484023 APCP25054 2843 aa2.17□□□□□ -2.06
ATP13A3-207ENST00000484023 BOD1L1Q8NFC6 3051 aa2.16□□□□□ -2.06
ATP13A3-207ENST00000484023 ADGRG4Q8IZF6 3080 aa2.16□□□□□ -2.06
ATP13A3-207ENST00000484023 PDZD2O15018 2839 aa2.15□□□□□ -2.06
ATP13A3-207ENST00000484023 ZNF469Q96JG9 3925 aaPredicted RBP2.15□□□□□ -2.07
ATP13A3-207ENST00000484023 SONP18583 2426 aaKnown RBP2.15□□□□□ -2.07
ATP13A3-207ENST00000484023 CSMD2Q7Z408 3487 aa2.15□□□□□ -2.07
ATP13A3-207ENST00000484023 OTOGQ6ZRI0 2925 aa2.14□□□□□ -2.07
ATP13A3-207ENST00000484023 NF1P21359 2839 aa2.14□□□□□ -2.07
ATP13A3-207ENST00000484023 NOTCH1P46531 2555 aa2.14□□□□□ -2.07
ATP13A3-207ENST00000484023 STAB1Q9NY15 2570 aa2.14□□□□□ -2.07
ATP13A3-207ENST00000484023 ROS1P08922 2347 aa2.13□□□□□ -2.07
ATP13A3-207ENST00000484023 CELSR1Q9NYQ6 3014 aa2.12□□□□□ -2.07
ATP13A3-207ENST00000484023 AKAP9Q99996 3911 aa2.12□□□□□ -2.07
ATP13A3-207ENST00000484023 TLN2Q9Y4G6 2542 aa2.12□□□□□ -2.07
ATP13A3-207ENST00000484023 FLG2Q5D862 2391 aaPredicted RBP2.12□□□□□ -2.07
ATP13A3-207ENST00000484023 M0QZ58 72 aa2.12□□□□□ -2.07
ATP13A3-207ENST00000484023 PRRC2CQ9Y520 2896 aaKnown RBP2.12□□□□□ -2.07
ATP13A3-207ENST00000484023 TENM2Q9NT68 2774 aa2.11□□□□□ -2.07
ATP13A3-207ENST00000484023 DNHD1Q96M86 4753 aa2.11□□□□□ -2.07
ATP13A3-207ENST00000484023 KRTAP12-1P59990 96 aa2.11□□□□□ -2.07
ATP13A3-207ENST00000484023 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
ATP13A3-207ENST00000484023 FLNAP21333 2647 aaKnown RBP2.08□□□□□ -2.08
ATP13A3-207ENST00000484023 MAP1AP78559 2803 aaPredicted RBP2.08□□□□□ -2.08
ATP13A3-207ENST00000484023 NSD1Q96L73 2696 aaPredicted RBP2.08□□□□□ -2.08
ATP13A3-207ENST00000484023 PKD1L1Q8TDX9 2849 aa2.08□□□□□ -2.08
ATP13A3-207ENST00000484023 SMR3AQ99954 134 aa2.07□□□□□ -2.08
ATP13A3-207ENST00000484023 VPS13CQ709C8 3753 aa2.06□□□□□ -2.08
ATP13A3-207ENST00000484023 TACC2O95359 2948 aa2.06□□□□□ -2.08
ATP13A3-207ENST00000484023 RPS29P62273 56 aaKnown RBP2.06□□□□□ -2.08
ATP13A3-207ENST00000484023 MGAM2Q2M2H8 2515 aa2.05□□□□□ -2.08
ATP13A3-207ENST00000484023 Q5VSD8 79 aa2.05□□□□□ -2.08
ATP13A3-207ENST00000484023 DCHS2Q6V1P9 2916 aa2.05□□□□□ -2.08
ATP13A3-207ENST00000484023 CUBNO60494 3623 aa2.04□□□□□ -2.08
ATP13A3-207ENST00000484023 TGP01266 2768 aa2.04□□□□□ -2.08
ATP13A3-207ENST00000484023 MXRA5Q9NR99 2828 aa2.03□□□□□ -2.08
ATP13A3-207ENST00000484023 NBEAL2Q6ZNJ1 2754 aa1.99□□□□□ -2.09
ATP13A3-207ENST00000484023 VPS13DQ5THJ4 4388 aa1.99□□□□□ -2.09
ATP13A3-207ENST00000484023 SVEP1Q4LDE5 3571 aa1.98□□□□□ -2.09
ATP13A3-207ENST00000484023 DNAH1Q9P2D7 4330 aa1.98□□□□□ -2.09
ATP13A3-207ENST00000484023 ANK2Q01484 3957 aa1.96□□□□□ -2.1
ATP13A3-207ENST00000484023 ZANQ9Y493 2812 aa1.96□□□□□ -2.1
ATP13A3-207ENST00000484023 TRRAPQ9Y4A5 3859 aa1.94□□□□□ -2.1
ATP13A3-207ENST00000484023 ANK3Q12955 4377 aaKnown RBP1.94□□□□□ -2.1
ATP13A3-207ENST00000484023 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
ATP13A3-207ENST00000484023 TNP1P09430 55 aa1.91□□□□□ -2.1
ATP13A3-207ENST00000484023 PRKDCP78527 4128 aaKnown RBP1.91□□□□□ -2.1
ATP13A3-207ENST00000484023 HRNRQ86YZ3 2850 aaPredicted RBP1.91□□□□□ -2.1
ATP13A3-207ENST00000484023 KMT2CQ8NEZ4 4911 aaKnown RBP1.9□□□□□ -2.11
ATP13A3-207ENST00000484023 MEGF8Q7Z7M0 2845 aa1.89□□□□□ -2.11
ATP13A3-207ENST00000484023 C9orf92A6NGG3 77 aa1.89□□□□□ -2.11
ATP13A3-207ENST00000484023 TENM1Q9UKZ4 2725 aa1.88□□□□□ -2.11
ATP13A3-207ENST00000484023 CMYA5Q8N3K9 4069 aa1.87□□□□□ -2.11
ATP13A3-207ENST00000484023 RYR3Q15413 4870 aa1.87□□□□□ -2.11
ATP13A3-207ENST00000484023 VWFP04275 2813 aa1.87□□□□□ -2.11
ATP13A3-207ENST00000484023 BIRC6Q9NR09 4857 aa1.86□□□□□ -2.11
ATP13A3-207ENST00000484023 TENM3Q9P273 2699 aa1.86□□□□□ -2.11
ATP13A3-207ENST00000484023 FRAS1Q86XX4 4008 aa1.85□□□□□ -2.11
ATP13A3-207ENST00000484023 DNAH8Q96JB1 4490 aa1.84□□□□□ -2.11
ATP13A3-207ENST00000484023 COL7A1Q02388 2944 aa1.84□□□□□ -2.11
ATP13A3-207ENST00000484023 STAB2Q8WWQ8 2551 aa1.84□□□□□ -2.12
ATP13A3-207ENST00000484023 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
ATP13A3-207ENST00000484023 EPPK1P58107 5090 aaKnown RBP1.83□□□□□ -2.12
ATP13A3-207ENST00000484023 DNAH11Q96DT5 4516 aa1.83□□□□□ -2.12
ATP13A3-207ENST00000484023 KRTAP4-1Q9BYQ7 146 aa1.82□□□□□ -2.12
ATP13A3-207ENST00000484023 CSMD3Q7Z407 3707 aa1.8□□□□□ -2.12
ATP13A3-207ENST00000484023 DYNC2H1Q8NCM8 4307 aaKnown RBP1.8□□□□□ -2.12
ATP13A3-207ENST00000484023 DNAH17Q9UFH2 4485 aa1.79□□□□□ -2.12
ATP13A3-207ENST00000484023 SRRM2Q9UQ35 2752 aaKnown RBP1.79□□□□□ -2.12
ATP13A3-207ENST00000484023 LYSTQ99698 3801 aa1.78□□□□□ -2.12
ATP13A3-207ENST00000484023 RYR1P21817 5038 aa1.78□□□□□ -2.12
ATP13A3-207ENST00000484023 DNAH10Q8IVF4 4471 aa1.77□□□□□ -2.13
ATP13A3-207ENST00000484023 DNAH9Q9NYC9 4486 aa1.77□□□□□ -2.13
ATP13A3-207ENST00000484023 DMBT1Q9UGM3 2413 aaPredicted RBP1.77□□□□□ -2.13
ATP13A3-207ENST00000484023 HYDINQ4G0P3 5121 aa1.77□□□□□ -2.13
ATP13A3-207ENST00000484023 RYR2Q92736 4967 aa1.77□□□□□ -2.13
ATP13A3-207ENST00000484023 HECTD4Q9Y4D8 3996 aa1.75□□□□□ -2.13
ATP13A3-207ENST00000484023 HUWE1Q7Z6Z7 4374 aaKnown RBP1.75□□□□□ -2.13
ATP13A3-207ENST00000484023 DNAH3Q8TD57 4116 aa1.74□□□□□ -2.13
ATP13A3-207ENST00000484023 DNAH2Q9P225 4427 aa1.73□□□□□ -2.13
ATP13A3-207ENST00000484023 DNAH7Q8WXX0 4024 aa1.73□□□□□ -2.13
ATP13A3-207ENST00000484023 DNAH6Q9C0G6 4158 aa1.73□□□□□ -2.13
ATP13A3-207ENST00000484023 SACSQ9NZJ4 4579 aa1.73□□□□□ -2.13
ATP13A3-207ENST00000484023 PCLOQ9Y6V0 5065 aa1.73□□□□□ -2.13
ATP13A3-207ENST00000484023 HERC2O95714 4834 aa1.72□□□□□ -2.13
ATP13A3-207ENST00000484023 KMT2AQ03164 3969 aa1.7□□□□□ -2.14
ATP13A3-207ENST00000484023 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
ATP13A3-207ENST00000484023 STARD9Q9P2P6 4700 aa1.68□□□□□ -2.14
ATP13A3-207ENST00000484023 APOBP04114 4563 aaKnown RBP1.67□□□□□ -2.14
ATP13A3-207ENST00000484023 KIAA1109Q2LD37 5005 aa1.66□□□□□ -2.14
ATP13A3-207ENST00000484023 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
ATP13A3-207ENST00000484023 UBR4Q5T4S7 5183 aa1.65□□□□□ -2.15
ATP13A3-207ENST00000484023 ABCA13Q86UQ4 5058 aa1.63□□□□□ -2.15
ATP13A3-207ENST00000484023 M0R2T5 61 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms