RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 CSMD3Q7Z407 3707 aa1.25□□□□□ -2.21
MSL3-216ENST00000483645 NAV2Q8IVL1 2488 aa1.25□□□□□ -2.21
MSL3-216ENST00000483645 PKHD1L1Q86WI1 4243 aa1.25□□□□□ -2.21
MSL3-216ENST00000483645 SONP18583 2426 aaKnown RBP1.25□□□□□ -2.21
MSL3-216ENST00000483645 TENM4Q6N022 2769 aa1.25□□□□□ -2.21
MSL3-216ENST00000483645 ZNF292O60281 2723 aa1.24□□□□□ -2.21
MSL3-216ENST00000483645 CENPEQ02224 2701 aa1.24□□□□□ -2.21
MSL3-216ENST00000483645 BDP1A6H8Y1 2624 aa1.24□□□□□ -2.21
MSL3-216ENST00000483645 TENM3Q9P273 2699 aa1.24□□□□□ -2.21
MSL3-216ENST00000483645 PDZD2O15018 2839 aa1.24□□□□□ -2.21
MSL3-216ENST00000483645 PKD1L2Q7Z442 2459 aa1.24□□□□□ -2.21
MSL3-216ENST00000483645 CUBNO60494 3623 aa1.23□□□□□ -2.21
MSL3-216ENST00000483645 COL7A1Q02388 2944 aa1.23□□□□□ -2.21
MSL3-216ENST00000483645 CHD8Q9HCK8 2581 aa1.23□□□□□ -2.21
MSL3-216ENST00000483645 DOPEY1Q5JWR5 2465 aa1.23□□□□□ -2.21
MSL3-216ENST00000483645 DEFB130BP0DP73 79 aa1.23□□□□□ -2.21
MSL3-216ENST00000483645 DEFB130AP0DP74 79 aa1.23□□□□□ -2.21
MSL3-216ENST00000483645 PRLHP81277 87 aa1.23□□□□□ -2.21
MSL3-216ENST00000483645 CCDC168Q8NDH2 2452 aa1.23□□□□□ -2.21
MSL3-216ENST00000483645 KMT2AQ03164 3969 aa1.23□□□□□ -2.21
MSL3-216ENST00000483645 USP9YO00507 2555 aaPredicted RBP1.22□□□□□ -2.21
MSL3-216ENST00000483645 LRRK2Q5S007 2527 aa1.22□□□□□ -2.21
MSL3-216ENST00000483645 FAT3Q8TDW7 4589 aa1.22□□□□□ -2.21
MSL3-216ENST00000483645 NBEAL1Q6ZS30 2694 aa1.22□□□□□ -2.21
MSL3-216ENST00000483645 LRP1Q07954 4544 aaKnown RBP1.22□□□□□ -2.21
MSL3-216ENST00000483645 K7ERS5 55 aa1.22□□□□□ -2.21
MSL3-216ENST00000483645 H1FX-AS1Q4G0G2 97 aa1.22□□□□□ -2.21
MSL3-216ENST00000483645 C10orf95Q9H7T3 257 aa1.22□□□□□ -2.21
MSL3-216ENST00000483645 PIEZO1Q92508 2521 aa1.22□□□□□ -2.21
MSL3-216ENST00000483645 ZFHX2Q9C0A1 2572 aaPredicted RBP1.21□□□□□ -2.22
MSL3-216ENST00000483645 LRP1BQ9NZR2 4599 aa1.21□□□□□ -2.22
MSL3-216ENST00000483645 TNXBP22105 4242 aa1.21□□□□□ -2.22
MSL3-216ENST00000483645 LINC01556Q5JQF7 62 aa1.21□□□□□ -2.22
MSL3-216ENST00000483645 TENM1Q9UKZ4 2725 aa1.21□□□□□ -2.22
MSL3-216ENST00000483645 HSPG2P98160 4391 aa1.21□□□□□ -2.22
MSL3-216ENST00000483645 ITPR3Q14573 2671 aa1.21□□□□□ -2.22
MSL3-216ENST00000483645 STARD9Q9P2P6 4700 aa1.2□□□□□ -2.22
MSL3-216ENST00000483645 SETD2Q9BYW2 2564 aaPredicted RBP1.2□□□□□ -2.22
MSL3-216ENST00000483645 TTC28Q96AY4 2481 aa1.2□□□□□ -2.22
MSL3-216ENST00000483645 A0A096LNI7 61 aa1.2□□□□□ -2.22
MSL3-216ENST00000483645 HELZ2Q9BYK8 2649 aaKnown RBP1.2□□□□□ -2.22
MSL3-216ENST00000483645 ABCA12Q86UK0 2595 aa1.19□□□□□ -2.22
MSL3-216ENST00000483645 A0A1B0GU33 70 aa1.19□□□□□ -2.22
MSL3-216ENST00000483645 H3BNG1 76 aa1.19□□□□□ -2.22
MSL3-216ENST00000483645 COX6B2Q6YFQ2 88 aa1.19□□□□□ -2.22
MSL3-216ENST00000483645 SSBP3-AS1Q7Z2R9 100 aa1.19□□□□□ -2.22
MSL3-216ENST00000483645 FLNCQ14315 2725 aa1.19□□□□□ -2.22
MSL3-216ENST00000483645 FAT2Q9NYQ8 4349 aa1.19□□□□□ -2.22
MSL3-216ENST00000483645 PKD1P98161 4303 aa1.19□□□□□ -2.22
MSL3-216ENST00000483645 NOTCH1P46531 2555 aa1.18□□□□□ -2.22
MSL3-216ENST00000483645 DEFB4AO15263 64 aa1.18□□□□□ -2.22
MSL3-216ENST00000483645 ZNF469Q96JG9 3925 aaPredicted RBP1.18□□□□□ -2.22
MSL3-216ENST00000483645 ITPR2Q14571 2701 aa1.17□□□□□ -2.22
MSL3-216ENST00000483645 PKHD1P08F94 4074 aa1.17□□□□□ -2.22
MSL3-216ENST00000483645 DEFB135Q30KP9 77 aa1.17□□□□□ -2.22
MSL3-216ENST00000483645 DEFB124Q8NES8 71 aa1.17□□□□□ -2.22
MSL3-216ENST00000483645 POLQO75417 2590 aa1.17□□□□□ -2.22
MSL3-216ENST00000483645 TGP01266 2768 aa1.17□□□□□ -2.22
MSL3-216ENST00000483645 TEP1Q99973 2627 aaKnown RBP1.17□□□□□ -2.22
MSL3-216ENST00000483645 FAT1Q14517 4588 aa1.16□□□□□ -2.22
MSL3-216ENST00000483645 HERC1Q15751 4861 aa1.16□□□□□ -2.22
MSL3-216ENST00000483645 FLGP20930 4061 aaPredicted RBP1.16□□□□□ -2.22
MSL3-216ENST00000483645 RPL37P61927 97 aaKnown RBP1.15□□□□□ -2.23
MSL3-216ENST00000483645 ACACBO00763 2458 aa1.15□□□□□ -2.23
MSL3-216ENST00000483645 ACANP16112 2415 aa1.15□□□□□ -2.23
MSL3-216ENST00000483645 VPS13BQ7Z7G8 4022 aa1.14□□□□□ -2.23
MSL3-216ENST00000483645 ATRQ13535 2644 aa1.14□□□□□ -2.23
MSL3-216ENST00000483645 SPART-AS1P0CW21 52 aa1.14□□□□□ -2.23
MSL3-216ENST00000483645 HTN3P15516 51 aa1.14□□□□□ -2.23
MSL3-216ENST00000483645 Q6ZRN7 208 aaPredicted RBP1.14□□□□□ -2.23
MSL3-216ENST00000483645 SPACA4Q8TDM5 124 aa1.14□□□□□ -2.23
MSL3-216ENST00000483645 PRO2289Q9P1D8 64 aa1.14□□□□□ -2.23
MSL3-216ENST00000483645 S4R3F8 94 aa1.14□□□□□ -2.23
MSL3-216ENST00000483645 STAB2Q8WWQ8 2551 aa1.14□□□□□ -2.23
MSL3-216ENST00000483645 FLNAP21333 2647 aaKnown RBP1.13□□□□□ -2.23
MSL3-216ENST00000483645 SPINK1P00995 79 aa1.13□□□□□ -2.23
MSL3-216ENST00000483645 COL6A5A8TX70 2615 aa1.13□□□□□ -2.23
MSL3-216ENST00000483645 FASNP49327 2511 aaKnown RBP1.12□□□□□ -2.23
MSL3-216ENST00000483645 SPINK6Q6UWN8 80 aa1.11□□□□□ -2.23
MSL3-216ENST00000483645 DEFB123Q8N688 67 aa1.11□□□□□ -2.23
MSL3-216ENST00000483645 PLAC4Q8WY50 150 aa1.11□□□□□ -2.23
MSL3-216ENST00000483645 IGSF10Q6WRI0 2623 aa1.11□□□□□ -2.23
MSL3-216ENST00000483645 CACNA1AO00555 2505 aa1.1□□□□□ -2.23
MSL3-216ENST00000483645 DMBT1Q9UGM3 2413 aaPredicted RBP1.1□□□□□ -2.23
MSL3-216ENST00000483645 MAST4O15021 2626 aa1.1□□□□□ -2.23
MSL3-216ENST00000483645 FLNBO75369 2602 aaKnown RBP1.1□□□□□ -2.23
MSL3-216ENST00000483645 USP24Q9UPU5 2620 aa1.1□□□□□ -2.23
MSL3-216ENST00000483645 FAM208BQ5VWN6 2430 aa1.09□□□□□ -2.24
MSL3-216ENST00000483645 NSD1Q96L73 2696 aaPredicted RBP1.09□□□□□ -2.24
MSL3-216ENST00000483645 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
MSL3-216ENST00000483645 A0A0D9SG42 100 aa1.08□□□□□ -2.24
MSL3-216ENST00000483645 MYO18BQ8IUG5 2567 aa1.08□□□□□ -2.24
MSL3-216ENST00000483645 MGAM2Q2M2H8 2515 aa1.08□□□□□ -2.24
MSL3-216ENST00000483645 DNHD1Q96M86 4753 aa1.06□□□□□ -2.24
MSL3-216ENST00000483645 SMR3AQ99954 134 aa1.06□□□□□ -2.24
MSL3-216ENST00000483645 INE1O15225 51 aa1.05□□□□□ -2.24
MSL3-216ENST00000483645 MUC17Q685J3 4493 aa1.05□□□□□ -2.24
MSL3-216ENST00000483645 LPAP08519 4548 aa1.05□□□□□ -2.24
MSL3-216ENST00000483645 STAB1Q9NY15 2570 aa1.04□□□□□ -2.24
MSL3-216ENST00000483645 APLNQ9ULZ1 77 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms