RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 LCA10Q71F78 164 aa6.8□□□□□ -1.32
CPNE1-225ENST00000483495 LRP2P98164 4655 aa6.78□□□□□ -1.32
CPNE1-225ENST00000483495 LPAP08519 4548 aa6.75□□□□□ -1.33
CPNE1-225ENST00000483495 SEC61GP60059 68 aa6.75□□□□□ -1.33
CPNE1-225ENST00000483495 A8MU10 97 aa6.75□□□□□ -1.33
CPNE1-225ENST00000483495 UQCR11O14957 56 aa6.71□□□□□ -1.34
CPNE1-225ENST00000483495 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
CPNE1-225ENST00000483495 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
CPNE1-225ENST00000483495 KRTAP3-3Q9BYR6 98 aa6.67□□□□□ -1.34
CPNE1-225ENST00000483495 SPATA8Q6RVD6 105 aa6.66□□□□□ -1.34
CPNE1-225ENST00000483495 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
CPNE1-225ENST00000483495 MIR22HGQ0VDD5 57 aa6.64□□□□□ -1.35
CPNE1-225ENST00000483495 RBM12B-AS1Q9P1G2 102 aa6.64□□□□□ -1.35
CPNE1-225ENST00000483495 S4R3F8 94 aa6.64□□□□□ -1.35
CPNE1-225ENST00000483495 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
CPNE1-225ENST00000483495 A6NN06 94 aa6.58□□□□□ -1.36
CPNE1-225ENST00000483495 MUC17Q685J3 4493 aa6.57□□□□□ -1.36
CPNE1-225ENST00000483495 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
CPNE1-225ENST00000483495 A0A1B0GU33 70 aa6.53□□□□□ -1.36
CPNE1-225ENST00000483495 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
CPNE1-225ENST00000483495 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
CPNE1-225ENST00000483495 HERC1Q15751 4861 aa6.49□□□□□ -1.37
CPNE1-225ENST00000483495 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
CPNE1-225ENST00000483495 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
CPNE1-225ENST00000483495 H0YAA0 97 aa6.47□□□□□ -1.37
CPNE1-225ENST00000483495 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
CPNE1-225ENST00000483495 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.38
CPNE1-225ENST00000483495 P0C880 135 aa6.39□□□□□ -1.39
CPNE1-225ENST00000483495 ADM2Q7Z4H4 148 aa6.38□□□□□ -1.39
CPNE1-225ENST00000483495 K7ERS5 55 aa6.34□□□□□ -1.39
CPNE1-225ENST00000483495 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
CPNE1-225ENST00000483495 MUC2Q02817 5179 aa6.31□□□□□ -1.4
CPNE1-225ENST00000483495 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
CPNE1-225ENST00000483495 M0QZ58 72 aa6.24□□□□□ -1.41
CPNE1-225ENST00000483495 LCE2CQ5TA81 110 aa6.21□□□□□ -1.42
CPNE1-225ENST00000483495 A0A0D9SG42 100 aa6.19□□□□□ -1.42
CPNE1-225ENST00000483495 PRAC1Q96KF2 57 aa6.19□□□□□ -1.42
CPNE1-225ENST00000483495 RNF213Q63HN8 5207 aa6.17□□□□□ -1.42
CPNE1-225ENST00000483495 UBR4Q5T4S7 5183 aa6.16□□□□□ -1.42
CPNE1-225ENST00000483495 R4GN34 69 aa6.13□□□□□ -1.43
CPNE1-225ENST00000483495 LORP23490 312 aaPredicted RBP6.12□□□□□ -1.43
CPNE1-225ENST00000483495 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
CPNE1-225ENST00000483495 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
CPNE1-225ENST00000483495 ROMO1P60602 79 aa6.08□□□□□ -1.44
CPNE1-225ENST00000483495 MT1HP80294 61 aa6.05□□□□□ -1.44
CPNE1-225ENST00000483495 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
CPNE1-225ENST00000483495 FAT4Q6V0I7 4981 aa6.02□□□□□ -1.45
CPNE1-225ENST00000483495 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
CPNE1-225ENST00000483495 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
CPNE1-225ENST00000483495 LINC01554Q52M75 96 aa6□□□□□ -1.45
CPNE1-225ENST00000483495 M0R2T5 61 aa5.96□□□□□ -1.45
CPNE1-225ENST00000483495 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
CPNE1-225ENST00000483495 MT2AP02795 61 aa5.86□□□□□ -1.47
CPNE1-225ENST00000483495 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
CPNE1-225ENST00000483495 MT1FP04733 61 aa5.83□□□□□ -1.48
CPNE1-225ENST00000483495 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
CPNE1-225ENST00000483495 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
CPNE1-225ENST00000483495 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
CPNE1-225ENST00000483495 CAMK2N1Q7Z7J9 78 aa5.75□□□□□ -1.49
CPNE1-225ENST00000483495 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
CPNE1-225ENST00000483495 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
CPNE1-225ENST00000483495 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
CPNE1-225ENST00000483495 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
CPNE1-225ENST00000483495 MT1BP07438 61 aa5.58□□□□□ -1.52
CPNE1-225ENST00000483495 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
CPNE1-225ENST00000483495 TNP1P09430 55 aa5.52□□□□□ -1.53
CPNE1-225ENST00000483495 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
CPNE1-225ENST00000483495 LCE2BO14633 110 aa5.45□□□□□ -1.54
CPNE1-225ENST00000483495 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
CPNE1-225ENST00000483495 MT1XP80297 61 aa5.45□□□□□ -1.54
CPNE1-225ENST00000483495 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
CPNE1-225ENST00000483495 PRO2289Q9P1D8 64 aa5.33□□□□□ -1.56
CPNE1-225ENST00000483495 USH2AO75445 5202 aa5.27□□□□□ -1.57
CPNE1-225ENST00000483495 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
CPNE1-225ENST00000483495 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
CPNE1-225ENST00000483495 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
CPNE1-225ENST00000483495 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
CPNE1-225ENST00000483495 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
CPNE1-225ENST00000483495 SSPOA2VEC9 5147 aa5.08□□□□□ -1.6
CPNE1-225ENST00000483495 LCE2DQ5TA82 110 aaPredicted RBP5.08□□□□□ -1.6
CPNE1-225ENST00000483495 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
CPNE1-225ENST00000483495 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
CPNE1-225ENST00000483495 H3BS24 57 aa5.06□□□□□ -1.6
CPNE1-225ENST00000483495 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
CPNE1-225ENST00000483495 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
CPNE1-225ENST00000483495 KRTAP4-8A0A0G2JLE6 195 aa4.96□□□□□ -1.61
CPNE1-225ENST00000483495 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.61
CPNE1-225ENST00000483495 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
CPNE1-225ENST00000483495 KMT2DO14686 5537 aa4.91□□□□□ -1.62
CPNE1-225ENST00000483495 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
CPNE1-225ENST00000483495 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
CPNE1-225ENST00000483495 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
CPNE1-225ENST00000483495 MT1EP04732 61 aa4.76□□□□□ -1.65
CPNE1-225ENST00000483495 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
CPNE1-225ENST00000483495 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
CPNE1-225ENST00000483495 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
CPNE1-225ENST00000483495 MT1LQ93083 61 aa4.69□□□□□ -1.66
CPNE1-225ENST00000483495 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
CPNE1-225ENST00000483495 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
CPNE1-225ENST00000483495 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms