RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 KRTAP8-1Q8IUC2 63 aa0.7□□□□□ -2.3
R3HDM1-216ENST00000483065 SONP18583 2426 aaKnown RBP0.7□□□□□ -2.3
R3HDM1-216ENST00000483065 WDFY3Q8IZQ1 3526 aa0.7□□□□□ -2.3
R3HDM1-216ENST00000483065 VCANP13611 3396 aa0.7□□□□□ -2.3
R3HDM1-216ENST00000483065 ACACBO00763 2458 aa0.69□□□□□ -2.3
R3HDM1-216ENST00000483065 NAV2Q8IVL1 2488 aa0.69□□□□□ -2.3
R3HDM1-216ENST00000483065 TEX15Q9BXT5 2789 aa0.69□□□□□ -2.3
R3HDM1-216ENST00000483065 LRP1Q07954 4544 aaKnown RBP0.69□□□□□ -2.3
R3HDM1-216ENST00000483065 PDZD2O15018 2839 aa0.69□□□□□ -2.3
R3HDM1-216ENST00000483065 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
R3HDM1-216ENST00000483065 LOC400499M0QZD8 3231 aa0.68□□□□□ -2.3
R3HDM1-216ENST00000483065 HRNRQ86YZ3 2850 aaPredicted RBP0.68□□□□□ -2.3
R3HDM1-216ENST00000483065 ANKRD11Q6UB99 2663 aaPredicted RBP0.68□□□□□ -2.3
R3HDM1-216ENST00000483065 COL6A5A8TX70 2615 aa0.68□□□□□ -2.3
R3HDM1-216ENST00000483065 LINC01556Q5JQF7 62 aa0.68□□□□□ -2.3
R3HDM1-216ENST00000483065 NBEAQ8NFP9 2946 aa0.68□□□□□ -2.3
R3HDM1-216ENST00000483065 ZZEF1O43149 2961 aa0.68□□□□□ -2.3
R3HDM1-216ENST00000483065 DOPEY1Q5JWR5 2465 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 LRBAP50851 2863 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 CSMD1Q96PZ7 3565 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 KALRNO60229 2985 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 MYO9AB2RTY4 2548 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 LRRK2Q5S007 2527 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 TLN2Q9Y4G6 2542 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 EYSQ5T1H1 3165 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 LPAP08519 4548 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 KMT2AQ03164 3969 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 DMXL2Q8TDJ6 3036 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 FREM2Q5SZK8 3169 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 DMXL1Q9Y485 3027 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 USP24Q9UPU5 2620 aa0.67□□□□□ -2.3
R3HDM1-216ENST00000483065 UTP20O75691 2785 aaKnown RBP0.66□□□□□ -2.3
R3HDM1-216ENST00000483065 CFAP47Q6ZTR5 3102 aa0.66□□□□□ -2.3
R3HDM1-216ENST00000483065 ZFHX4Q86UP3 3567 aa0.66□□□□□ -2.3
R3HDM1-216ENST00000483065 CCDC168Q8NDH2 2452 aa0.66□□□□□ -2.3
R3HDM1-216ENST00000483065 TACC2O95359 2948 aa0.66□□□□□ -2.3
R3HDM1-216ENST00000483065 LYSTQ99698 3801 aa0.66□□□□□ -2.3
R3HDM1-216ENST00000483065 DMDP11532 3685 aa0.66□□□□□ -2.3
R3HDM1-216ENST00000483065 SMG1Q96Q15 3661 aaKnown RBP0.66□□□□□ -2.3
R3HDM1-216ENST00000483065 MYO15AQ9UKN7 3530 aa0.65□□□□□ -2.3
R3HDM1-216ENST00000483065 DCHS2Q6V1P9 2916 aa0.65□□□□□ -2.3
R3HDM1-216ENST00000483065 ASPMQ8IZT6 3477 aa0.65□□□□□ -2.3
R3HDM1-216ENST00000483065 ITPR3Q14573 2671 aa0.65□□□□□ -2.3
R3HDM1-216ENST00000483065 A0A096LNI7 61 aa0.65□□□□□ -2.31
R3HDM1-216ENST00000483065 STAB1Q9NY15 2570 aa0.65□□□□□ -2.31
R3HDM1-216ENST00000483065 TENM3Q9P273 2699 aa0.65□□□□□ -2.31
R3HDM1-216ENST00000483065 ITPR1Q14643 2758 aa0.65□□□□□ -2.31
R3HDM1-216ENST00000483065 CFAP46Q8IYW2 2715 aa0.65□□□□□ -2.31
R3HDM1-216ENST00000483065 EPG5Q9HCE0 2579 aa0.64□□□□□ -2.31
R3HDM1-216ENST00000483065 ATMQ13315 3056 aa0.64□□□□□ -2.31
R3HDM1-216ENST00000483065 ADGRG4Q8IZF6 3080 aa0.64□□□□□ -2.31
R3HDM1-216ENST00000483065 DCHS1Q96JQ0 3298 aa0.64□□□□□ -2.31
R3HDM1-216ENST00000483065 SPRR2EP22531 72 aa0.64□□□□□ -2.31
R3HDM1-216ENST00000483065 KRTAP6-2Q3LI66 62 aa0.64□□□□□ -2.31
R3HDM1-216ENST00000483065 KRTAP5-10Q6L8G5 202 aa0.64□□□□□ -2.31
R3HDM1-216ENST00000483065 COL12A1Q99715 3063 aa0.64□□□□□ -2.31
R3HDM1-216ENST00000483065 IGSF10Q6WRI0 2623 aa0.64□□□□□ -2.31
R3HDM1-216ENST00000483065 SPENQ96T58 3664 aaKnown RBP0.63□□□□□ -2.31
R3HDM1-216ENST00000483065 RELNP78509 3460 aa0.63□□□□□ -2.31
R3HDM1-216ENST00000483065 LAMA5O15230 3695 aa0.63□□□□□ -2.31
R3HDM1-216ENST00000483065 CENPEQ02224 2701 aa0.63□□□□□ -2.31
R3HDM1-216ENST00000483065 FASNP49327 2511 aaKnown RBP0.63□□□□□ -2.31
R3HDM1-216ENST00000483065 BOD1L1Q8NFC6 3051 aa0.63□□□□□ -2.31
R3HDM1-216ENST00000483065 NBEAL2Q6ZNJ1 2754 aa0.62□□□□□ -2.31
R3HDM1-216ENST00000483065 MYO18BQ8IUG5 2567 aa0.62□□□□□ -2.31
R3HDM1-216ENST00000483065 MXRA5Q9NR99 2828 aa0.62□□□□□ -2.31
R3HDM1-216ENST00000483065 ITPR2Q14571 2701 aa0.62□□□□□ -2.31
R3HDM1-216ENST00000483065 TEP1Q99973 2627 aaKnown RBP0.62□□□□□ -2.31
R3HDM1-216ENST00000483065 VPS13BQ7Z7G8 4022 aa0.62□□□□□ -2.31
R3HDM1-216ENST00000483065 SVEP1Q4LDE5 3571 aa0.62□□□□□ -2.31
R3HDM1-216ENST00000483065 PKD1P98161 4303 aa0.62□□□□□ -2.31
R3HDM1-216ENST00000483065 MUC3AQ02505 3323 aa0.62□□□□□ -2.31
R3HDM1-216ENST00000483065 MAP1AP78559 2803 aaPredicted RBP0.61□□□□□ -2.31
R3HDM1-216ENST00000483065 FLNAP21333 2647 aaKnown RBP0.61□□□□□ -2.31
R3HDM1-216ENST00000483065 VPS13CQ709C8 3753 aa0.61□□□□□ -2.31
R3HDM1-216ENST00000483065 DMBT1Q9UGM3 2413 aaPredicted RBP0.61□□□□□ -2.31
R3HDM1-216ENST00000483065 ZANQ9Y493 2812 aa0.61□□□□□ -2.31
R3HDM1-216ENST00000483065 AKAP9Q99996 3911 aa0.61□□□□□ -2.31
R3HDM1-216ENST00000483065 CRYBG3Q68DQ2 2970 aa0.6□□□□□ -2.31
R3HDM1-216ENST00000483065 ANK3Q12955 4377 aaKnown RBP0.6□□□□□ -2.31
R3HDM1-216ENST00000483065 NBPF19A0A087WUL8 3843 aa0.6□□□□□ -2.31
R3HDM1-216ENST00000483065 HIVEP1P15822 2718 aa0.6□□□□□ -2.31
R3HDM1-216ENST00000483065 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
R3HDM1-216ENST00000483065 SMR3BP02814 79 aaPredicted RBP0.59□□□□□ -2.31
R3HDM1-216ENST00000483065 SPRR2FQ96RM1 72 aa0.59□□□□□ -2.31
R3HDM1-216ENST00000483065 COL7A1Q02388 2944 aa0.59□□□□□ -2.32
R3HDM1-216ENST00000483065 MAST4O15021 2626 aa0.59□□□□□ -2.32
R3HDM1-216ENST00000483065 SACSQ9NZJ4 4579 aa0.59□□□□□ -2.32
R3HDM1-216ENST00000483065 CSMD2Q7Z408 3487 aa0.58□□□□□ -2.32
R3HDM1-216ENST00000483065 TRRAPQ9Y4A5 3859 aa0.58□□□□□ -2.32
R3HDM1-216ENST00000483065 CMYA5Q8N3K9 4069 aa0.58□□□□□ -2.32
R3HDM1-216ENST00000483065 CUBNO60494 3623 aa0.58□□□□□ -2.32
R3HDM1-216ENST00000483065 NIPBLQ6KC79 2804 aaeCLIP0.57□□□□□ -2.32
R3HDM1-216ENST00000483065 RPS29P62273 56 aaKnown RBP0.57□□□□□ -2.32
R3HDM1-216ENST00000483065 MGAM2Q2M2H8 2515 aa0.57□□□□□ -2.32
R3HDM1-216ENST00000483065 TENM2Q9NT68 2774 aa0.57□□□□□ -2.32
R3HDM1-216ENST00000483065 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
R3HDM1-216ENST00000483065 DNAH3Q8TD57 4116 aa0.56□□□□□ -2.32
R3HDM1-216ENST00000483065 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
R3HDM1-216ENST00000483065 TGP01266 2768 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms