RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 SPINK1P00995 79 aa1.47□□□□□ -2.17
CBX3-207ENST00000481300 MT-ATP8P03928 68 aa1.47□□□□□ -2.17
CBX3-207ENST00000481300 ATP5EP2Q5VTU8 51 aa1.47□□□□□ -2.17
CBX3-207ENST00000481300 CRCT1Q9UGL9 99 aa1.47□□□□□ -2.17
CBX3-207ENST00000481300 HERC2O95714 4834 aa1.47□□□□□ -2.17
CBX3-207ENST00000481300 J3KT08 172 aa1.46□□□□□ -2.18
CBX3-207ENST00000481300 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
CBX3-207ENST00000481300 Q5XG85 94 aa1.46□□□□□ -2.18
CBX3-207ENST00000481300 LIMD2Q9BT23 127 aa1.46□□□□□ -2.18
CBX3-207ENST00000481300 LINC00472Q9H8W2 130 aa1.46□□□□□ -2.18
CBX3-207ENST00000481300 SRRM2Q9UQ35 2752 aaKnown RBP1.45□□□□□ -2.18
CBX3-207ENST00000481300 NDUFB1O75438 58 aa1.45□□□□□ -2.18
CBX3-207ENST00000481300 MT1HL1P0DM35 61 aa1.45□□□□□ -2.18
CBX3-207ENST00000481300 LINC00313P59037 77 aa1.45□□□□□ -2.18
CBX3-207ENST00000481300 RPS29P62273 56 aaKnown RBP1.45□□□□□ -2.18
CBX3-207ENST00000481300 HIST1H4AP62805 103 aaKnown RBP1.45□□□□□ -2.18
CBX3-207ENST00000481300 ASB16-AS1Q495Z4 193 aa1.45□□□□□ -2.18
CBX3-207ENST00000481300 C1orf195Q5TG92 126 aa1.45□□□□□ -2.18
CBX3-207ENST00000481300 PRR15Q8IV56 129 aa1.45□□□□□ -2.18
CBX3-207ENST00000481300 Q96NJ1 140 aa1.45□□□□□ -2.18
CBX3-207ENST00000481300 IMUPQ9GZP8 106 aa1.45□□□□□ -2.18
CBX3-207ENST00000481300 A0A087WVE0 104 aa1.44□□□□□ -2.18
CBX3-207ENST00000481300 K7EQZ3 153 aa1.44□□□□□ -2.18
CBX3-207ENST00000481300 SCGB1A1P11684 91 aa1.44□□□□□ -2.18
CBX3-207ENST00000481300 PKHD1L1Q86WI1 4243 aa1.44□□□□□ -2.18
CBX3-207ENST00000481300 FAT3Q8TDW7 4589 aa1.43□□□□□ -2.18
CBX3-207ENST00000481300 LRP1Q07954 4544 aaKnown RBP1.43□□□□□ -2.18
CBX3-207ENST00000481300 C4orf26Q17RF5 130 aa1.43□□□□□ -2.18
CBX3-207ENST00000481300 RETNLBQ9BQ08 111 aa1.43□□□□□ -2.18
CBX3-207ENST00000481300 FAM236AA0A1B0GUQ0 79 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 FAM236BA0A1B0GV22 79 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 hDV103S1A0JD37 113 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 HCG22E2RYF7 251 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 CASC2Q6XLA1 102 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 FP248Q71RG6 208 aaPredicted RBP1.42□□□□□ -2.18
CBX3-207ENST00000481300 WFDC13Q8IUB5 93 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 KRTAP4-1Q9BYQ7 146 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 TNXBP22105 4242 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 FLG2Q5D862 2391 aaPredicted RBP1.42□□□□□ -2.18
CBX3-207ENST00000481300 MYCBP2O75592 4640 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 ABCA13Q86UQ4 5058 aa1.42□□□□□ -2.18
CBX3-207ENST00000481300 MMP24-AS1A0A0U1RRL7 71 aa1.41□□□□□ -2.18
CBX3-207ENST00000481300 C9orf92A6NGG3 77 aa1.41□□□□□ -2.18
CBX3-207ENST00000481300 KRTAP13-4Q3LI77 160 aa1.41□□□□□ -2.18
CBX3-207ENST00000481300 TMEM254Q8TBM7 123 aa1.41□□□□□ -2.18
CBX3-207ENST00000481300 TRAV7A0A075B6U4 112 aa1.4□□□□□ -2.19
CBX3-207ENST00000481300 ATOX1O00244 68 aa1.4□□□□□ -2.19
CBX3-207ENST00000481300 UQCRQO14949 82 aa1.4□□□□□ -2.19
CBX3-207ENST00000481300 SMIM20Q8N5G0 67 aa1.4□□□□□ -2.19
CBX3-207ENST00000481300 MRPL34Q9BQ48 92 aaKnown RBP1.4□□□□□ -2.19
CBX3-207ENST00000481300 PCLOQ9Y6V0 5065 aa1.4□□□□□ -2.19
CBX3-207ENST00000481300 SERP2Q8N6R1 65 aa1.39□□□□□ -2.19
CBX3-207ENST00000481300 TP53AIP1Q9HCN2 124 aa1.39□□□□□ -2.19
CBX3-207ENST00000481300 DMBT1Q9UGM3 2413 aaPredicted RBP1.39□□□□□ -2.19
CBX3-207ENST00000481300 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
CBX3-207ENST00000481300 TRAV22A0A0B4J277 110 aa1.37□□□□□ -2.19
CBX3-207ENST00000481300 H0Y9P7 68 aa1.37□□□□□ -2.19
CBX3-207ENST00000481300 CCDC179H3BU77 68 aa1.37□□□□□ -2.19
CBX3-207ENST00000481300 COX7CP15954 63 aa1.37□□□□□ -2.19
CBX3-207ENST00000481300 TPRXLQ17RH7 258 aa1.37□□□□□ -2.19
CBX3-207ENST00000481300 ATP11AUNQ6ZP68 121 aa1.37□□□□□ -2.19
CBX3-207ENST00000481300 C20orf197Q8N268 126 aa1.37□□□□□ -2.19
CBX3-207ENST00000481300 PRO2289Q9P1D8 64 aa1.37□□□□□ -2.19
CBX3-207ENST00000481300 LOC101927531A0A1B0GV80 90 aa1.36□□□□□ -2.19
CBX3-207ENST00000481300 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
CBX3-207ENST00000481300 LINC00208Q96KT6 92 aa1.36□□□□□ -2.19
CBX3-207ENST00000481300 SNURFQ9Y675 71 aa1.36□□□□□ -2.19
CBX3-207ENST00000481300 HERC1Q15751 4861 aa1.36□□□□□ -2.19
CBX3-207ENST00000481300 HMCN2Q8NDA2 5059 aa1.35□□□□□ -2.19
CBX3-207ENST00000481300 CYP4F30PQ9H0H9 118 aa1.35□□□□□ -2.19
CBX3-207ENST00000481300 NDUFC1O43677 76 aa1.34□□□□□ -2.19
CBX3-207ENST00000481300 SPINK7P58062 85 aa1.34□□□□□ -2.19
CBX3-207ENST00000481300 TMEM258P61165 79 aa1.34□□□□□ -2.19
CBX3-207ENST00000481300 KLKP1Q107X0 134 aa1.34□□□□□ -2.19
CBX3-207ENST00000481300 C7orf65Q6ZTY9 151 aa1.33□□□□□ -2.2
CBX3-207ENST00000481300 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
CBX3-207ENST00000481300 H7BZZ5 65 aa1.32□□□□□ -2.2
CBX3-207ENST00000481300 LPAP08519 4548 aa1.32□□□□□ -2.2
CBX3-207ENST00000481300 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
CBX3-207ENST00000481300 FAM236DA0A1B0GTK5 79 aa1.31□□□□□ -2.2
CBX3-207ENST00000481300 FAM236CP0DP71 79 aa1.31□□□□□ -2.2
CBX3-207ENST00000481300 COA5Q86WW8 74 aa1.31□□□□□ -2.2
CBX3-207ENST00000481300 LRP2P98164 4655 aa1.31□□□□□ -2.2
CBX3-207ENST00000481300 ATP5EP56381 51 aaPredicted RBP1.3□□□□□ -2.2
CBX3-207ENST00000481300 COX6B2Q6YFQ2 88 aa1.3□□□□□ -2.2
CBX3-207ENST00000481300 A8MUN3 132 aa1.29□□□□□ -2.2
CBX3-207ENST00000481300 ACYP2P14621 99 aa1.29□□□□□ -2.2
CBX3-207ENST00000481300 DMAC1Q96GE9 116 aa1.29□□□□□ -2.2
CBX3-207ENST00000481300 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
CBX3-207ENST00000481300 CHKB-CPT1BH3BT56 60 aa1.28□□□□□ -2.2
CBX3-207ENST00000481300 H1FX-AS1Q4G0G2 97 aa1.28□□□□□ -2.2
CBX3-207ENST00000481300 KTN1-AS1Q86SY8 53 aa1.28□□□□□ -2.2
CBX3-207ENST00000481300 SERP1Q9Y6X1 66 aa1.28□□□□□ -2.2
CBX3-207ENST00000481300 RPS28P62857 69 aaKnown RBP1.27□□□□□ -2.21
CBX3-207ENST00000481300 UBR4Q5T4S7 5183 aa1.26□□□□□ -2.21
CBX3-207ENST00000481300 SPTSSBQ8NFR3 76 aa1.26□□□□□ -2.21
CBX3-207ENST00000481300 S4R3F8 94 aa1.26□□□□□ -2.21
CBX3-207ENST00000481300 KRTAP19-2Q3LHN2 52 aa1.25□□□□□ -2.21
CBX3-207ENST00000481300 CSAG1Q6PB30 78 aa1.25□□□□□ -2.21
CBX3-207ENST00000481300 LCA10Q71F78 164 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms