RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 KRTAP9-7A8MTY7 169 aa5.94□□□□□ -1.46
HDAC1-207ENST00000481281 OCR1Q9BZK8 76 aa5.92□□□□□ -1.46
HDAC1-207ENST00000481281 J3QR89 54 aa5.91□□□□□ -1.46
HDAC1-207ENST00000481281 SPRR2GQ9BYE4 73 aa5.9□□□□□ -1.46
HDAC1-207ENST00000481281 LINC00208Q96KT6 92 aa5.89□□□□□ -1.47
HDAC1-207ENST00000481281 KLKP1Q107X0 134 aa5.87□□□□□ -1.47
HDAC1-207ENST00000481281 A8MUN3 132 aa5.86□□□□□ -1.47
HDAC1-207ENST00000481281 MP68P56378 58 aa5.86□□□□□ -1.47
HDAC1-207ENST00000481281 MT1BP07438 61 aa5.85□□□□□ -1.47
HDAC1-207ENST00000481281 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
HDAC1-207ENST00000481281 NDUFC1O43677 76 aa5.83□□□□□ -1.48
HDAC1-207ENST00000481281 MACF1Q9UPN3 7388 aaKnown RBP5.83□□□□□ -1.48
HDAC1-207ENST00000481281 Q5VV11 94 aa5.82□□□□□ -1.48
HDAC1-207ENST00000481281 IMUPQ9GZP8 106 aa5.81□□□□□ -1.48
HDAC1-207ENST00000481281 H0YAA0 97 aa5.8□□□□□ -1.48
HDAC1-207ENST00000481281 H3BPC8 53 aa5.8□□□□□ -1.48
HDAC1-207ENST00000481281 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
HDAC1-207ENST00000481281 SCGB1A1P11684 91 aa5.76□□□□□ -1.49
HDAC1-207ENST00000481281 PCP4P48539 62 aa5.75□□□□□ -1.49
HDAC1-207ENST00000481281 A6NN06 94 aa5.73□□□□□ -1.49
HDAC1-207ENST00000481281 H3BS24 57 aa5.72□□□□□ -1.49
HDAC1-207ENST00000481281 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
HDAC1-207ENST00000481281 K7ERU9 68 aa5.71□□□□□ -1.5
HDAC1-207ENST00000481281 MT-ATP8P03928 68 aa5.71□□□□□ -1.5
HDAC1-207ENST00000481281 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.5
HDAC1-207ENST00000481281 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
HDAC1-207ENST00000481281 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
HDAC1-207ENST00000481281 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
HDAC1-207ENST00000481281 TRAV7A0A075B6U4 112 aa5.65□□□□□ -1.5
HDAC1-207ENST00000481281 SMIM20Q8N5G0 67 aa5.65□□□□□ -1.5
HDAC1-207ENST00000481281 P0C880 135 aa5.6□□□□□ -1.51
HDAC1-207ENST00000481281 C20orf197Q8N268 126 aa5.58□□□□□ -1.52
HDAC1-207ENST00000481281 ACYP2P14621 99 aa5.56□□□□□ -1.52
HDAC1-207ENST00000481281 R4GN34 69 aa5.55□□□□□ -1.52
HDAC1-207ENST00000481281 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
HDAC1-207ENST00000481281 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
HDAC1-207ENST00000481281 M0QZ58 72 aa5.51□□□□□ -1.53
HDAC1-207ENST00000481281 SNURFQ9Y675 71 aa5.51□□□□□ -1.53
HDAC1-207ENST00000481281 MT1XP80297 61 aa5.49□□□□□ -1.53
HDAC1-207ENST00000481281 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
HDAC1-207ENST00000481281 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
HDAC1-207ENST00000481281 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
HDAC1-207ENST00000481281 SERP2Q8N6R1 65 aa5.47□□□□□ -1.53
HDAC1-207ENST00000481281 KRTAP5-9P26371 169 aa5.46□□□□□ -1.54
HDAC1-207ENST00000481281 SPANXA2-OT1Q8N9U9 137 aa5.46□□□□□ -1.54
HDAC1-207ENST00000481281 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
HDAC1-207ENST00000481281 LINC01554Q52M75 96 aa5.41□□□□□ -1.54
HDAC1-207ENST00000481281 NEBP20929 6669 aa5.38□□□□□ -1.55
HDAC1-207ENST00000481281 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
HDAC1-207ENST00000481281 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
HDAC1-207ENST00000481281 COX7CP15954 63 aa5.31□□□□□ -1.56
HDAC1-207ENST00000481281 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
HDAC1-207ENST00000481281 KMT2DO14686 5537 aa5.31□□□□□ -1.56
HDAC1-207ENST00000481281 COA5Q86WW8 74 aa5.29□□□□□ -1.56
HDAC1-207ENST00000481281 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
HDAC1-207ENST00000481281 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
HDAC1-207ENST00000481281 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
HDAC1-207ENST00000481281 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
HDAC1-207ENST00000481281 H7BZZ5 65 aa5.24□□□□□ -1.57
HDAC1-207ENST00000481281 CYSTM1Q9H1C7 97 aa5.24□□□□□ -1.57
HDAC1-207ENST00000481281 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
HDAC1-207ENST00000481281 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
HDAC1-207ENST00000481281 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
HDAC1-207ENST00000481281 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
HDAC1-207ENST00000481281 ANAPC13Q9BS18 74 aa5.21□□□□□ -1.58
HDAC1-207ENST00000481281 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
HDAC1-207ENST00000481281 SPRR2EP22531 72 aa5.18□□□□□ -1.58
HDAC1-207ENST00000481281 SPRR2BP35325 72 aa5.18□□□□□ -1.58
HDAC1-207ENST00000481281 SPRR2AP35326 72 aa5.18□□□□□ -1.58
HDAC1-207ENST00000481281 SEC61GP60059 68 aa5.15□□□□□ -1.59
HDAC1-207ENST00000481281 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
HDAC1-207ENST00000481281 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
HDAC1-207ENST00000481281 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
HDAC1-207ENST00000481281 SERP1Q9Y6X1 66 aa5.14□□□□□ -1.59
HDAC1-207ENST00000481281 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
HDAC1-207ENST00000481281 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
HDAC1-207ENST00000481281 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
HDAC1-207ENST00000481281 A0A1B0GU33 70 aa5.08□□□□□ -1.6
HDAC1-207ENST00000481281 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
HDAC1-207ENST00000481281 A0A0D9SG42 100 aa5.06□□□□□ -1.6
HDAC1-207ENST00000481281 CCDC179H3BU77 68 aa5.04□□□□□ -1.6
HDAC1-207ENST00000481281 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
HDAC1-207ENST00000481281 A0A1B0GU69 56 aa5.01□□□□□ -1.61
HDAC1-207ENST00000481281 SPRR2DP22532 72 aa5□□□□□ -1.61
HDAC1-207ENST00000481281 KRTAP12-1P59990 96 aa5□□□□□ -1.61
HDAC1-207ENST00000481281 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
HDAC1-207ENST00000481281 ATP5EP56381 51 aaPredicted RBP4.97□□□□□ -1.61
HDAC1-207ENST00000481281 TMEM258P61165 79 aa4.94□□□□□ -1.62
HDAC1-207ENST00000481281 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
HDAC1-207ENST00000481281 SMIM26A0A096LP01 95 aa4.93□□□□□ -1.62
HDAC1-207ENST00000481281 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
HDAC1-207ENST00000481281 KRTAP2-1Q9BYU5 128 aa4.93□□□□□ -1.62
HDAC1-207ENST00000481281 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
HDAC1-207ENST00000481281 A8MU10 97 aa4.9□□□□□ -1.63
HDAC1-207ENST00000481281 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
HDAC1-207ENST00000481281 PRR15LQ9BU68 103 aa4.87□□□□□ -1.63
HDAC1-207ENST00000481281 MT1EP04732 61 aa4.86□□□□□ -1.63
HDAC1-207ENST00000481281 LINC01558Q9Y6Z2 57 aa4.85□□□□□ -1.63
HDAC1-207ENST00000481281 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
HDAC1-207ENST00000481281 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms