RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 KRTAP3-3Q9BYR6 98 aa4.56□□□□□ -1.68
EWSR1-216ENST00000479135 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
EWSR1-216ENST00000479135 DNAH5Q8TE73 4624 aa4.47□□□□□ -1.69
EWSR1-216ENST00000479135 ZNF469Q96JG9 3925 aaPredicted RBP4.41□□□□□ -1.7
EWSR1-216ENST00000479135 DNAH11Q96DT5 4516 aa4.4□□□□□ -1.7
EWSR1-216ENST00000479135 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
EWSR1-216ENST00000479135 HUWE1Q7Z6Z7 4374 aaKnown RBP4.39□□□□□ -1.71
EWSR1-216ENST00000479135 TRRAPQ9Y4A5 3859 aa4.38□□□□□ -1.71
EWSR1-216ENST00000479135 DYNC1H1Q14204 4646 aaKnown RBP4.38□□□□□ -1.71
EWSR1-216ENST00000479135 DNAH17Q9UFH2 4485 aa4.38□□□□□ -1.71
EWSR1-216ENST00000479135 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
EWSR1-216ENST00000479135 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
EWSR1-216ENST00000479135 DNHD1Q96M86 4753 aa4.36□□□□□ -1.71
EWSR1-216ENST00000479135 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
EWSR1-216ENST00000479135 COL7A1Q02388 2944 aa4.34□□□□□ -1.71
EWSR1-216ENST00000479135 LRP1BQ9NZR2 4599 aa4.34□□□□□ -1.72
EWSR1-216ENST00000479135 KIAA1109Q2LD37 5005 aa4.33□□□□□ -1.72
EWSR1-216ENST00000479135 DNAH9Q9NYC9 4486 aa4.3□□□□□ -1.72
EWSR1-216ENST00000479135 RYR1P21817 5038 aa4.29□□□□□ -1.72
EWSR1-216ENST00000479135 VPS13DQ5THJ4 4388 aa4.29□□□□□ -1.72
EWSR1-216ENST00000479135 SACSQ9NZJ4 4579 aa4.29□□□□□ -1.72
EWSR1-216ENST00000479135 FRAS1Q86XX4 4008 aa4.27□□□□□ -1.73
EWSR1-216ENST00000479135 DNAH8Q96JB1 4490 aa4.24□□□□□ -1.73
EWSR1-216ENST00000479135 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
EWSR1-216ENST00000479135 DNAH2Q9P225 4427 aa4.23□□□□□ -1.73
EWSR1-216ENST00000479135 RYR2Q92736 4967 aa4.23□□□□□ -1.73
EWSR1-216ENST00000479135 DNAH1Q9P2D7 4330 aa4.22□□□□□ -1.73
EWSR1-216ENST00000479135 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
EWSR1-216ENST00000479135 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
EWSR1-216ENST00000479135 KRTAP4-5Q9BYR2 181 aa4.19□□□□□ -1.74
EWSR1-216ENST00000479135 FAT1Q14517 4588 aa4.16□□□□□ -1.74
EWSR1-216ENST00000479135 STARD9Q9P2P6 4700 aa4.15□□□□□ -1.74
EWSR1-216ENST00000479135 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
EWSR1-216ENST00000479135 RYR3Q15413 4870 aa4.13□□□□□ -1.75
EWSR1-216ENST00000479135 CMYA5Q8N3K9 4069 aa4.13□□□□□ -1.75
EWSR1-216ENST00000479135 LYSTQ99698 3801 aa4.12□□□□□ -1.75
EWSR1-216ENST00000479135 SPRR2EP22531 72 aa4.1□□□□□ -1.75
EWSR1-216ENST00000479135 SPRR2BP35325 72 aa4.1□□□□□ -1.75
EWSR1-216ENST00000479135 SPRR2AP35326 72 aa4.1□□□□□ -1.75
EWSR1-216ENST00000479135 APOBP04114 4563 aaKnown RBP4.1□□□□□ -1.75
EWSR1-216ENST00000479135 ALMS1Q8TCU4 4167 aa4.09□□□□□ -1.76
EWSR1-216ENST00000479135 ANK2Q01484 3957 aa4.07□□□□□ -1.76
EWSR1-216ENST00000479135 MT1GP13640 62 aa4.06□□□□□ -1.76
EWSR1-216ENST00000479135 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
EWSR1-216ENST00000479135 HERC1Q15751 4861 aa4.02□□□□□ -1.77
EWSR1-216ENST00000479135 HYDINQ4G0P3 5121 aa4□□□□□ -1.77
EWSR1-216ENST00000479135 KMT2AQ03164 3969 aa4□□□□□ -1.77
EWSR1-216ENST00000479135 FAT3Q8TDW7 4589 aa3.96□□□□□ -1.78
EWSR1-216ENST00000479135 SPRR2DP22532 72 aa3.94□□□□□ -1.78
EWSR1-216ENST00000479135 DYNC2H1Q8NCM8 4307 aaKnown RBP3.93□□□□□ -1.78
EWSR1-216ENST00000479135 KRTAP4-1Q9BYQ7 146 aa3.93□□□□□ -1.78
EWSR1-216ENST00000479135 MYCBP2O75592 4640 aa3.93□□□□□ -1.78
EWSR1-216ENST00000479135 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
EWSR1-216ENST00000479135 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
EWSR1-216ENST00000479135 ABCA13Q86UQ4 5058 aa3.89□□□□□ -1.79
EWSR1-216ENST00000479135 PRKDCP78527 4128 aaKnown RBP3.88□□□□□ -1.79
EWSR1-216ENST00000479135 BIRC6Q9NR09 4857 aa3.87□□□□□ -1.79
EWSR1-216ENST00000479135 HERC2O95714 4834 aa3.87□□□□□ -1.79
EWSR1-216ENST00000479135 DNAH3Q8TD57 4116 aa3.86□□□□□ -1.79
EWSR1-216ENST00000479135 PRM1P04553 51 aa3.85□□□□□ -1.79
EWSR1-216ENST00000479135 DNAH7Q8WXX0 4024 aa3.84□□□□□ -1.79
EWSR1-216ENST00000479135 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
EWSR1-216ENST00000479135 MT1HP80294 61 aa3.83□□□□□ -1.8
EWSR1-216ENST00000479135 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
EWSR1-216ENST00000479135 LCE2BO14633 110 aa3.82□□□□□ -1.8
EWSR1-216ENST00000479135 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
EWSR1-216ENST00000479135 HSPG2P98160 4391 aa3.79□□□□□ -1.8
EWSR1-216ENST00000479135 LRP1Q07954 4544 aaKnown RBP3.76□□□□□ -1.81
EWSR1-216ENST00000479135 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
EWSR1-216ENST00000479135 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
EWSR1-216ENST00000479135 MT2AP02795 61 aa3.75□□□□□ -1.81
EWSR1-216ENST00000479135 MT4P47944 62 aa3.74□□□□□ -1.81
EWSR1-216ENST00000479135 FAT2Q9NYQ8 4349 aa3.74□□□□□ -1.81
EWSR1-216ENST00000479135 VPS13BQ7Z7G8 4022 aa3.73□□□□□ -1.81
EWSR1-216ENST00000479135 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
EWSR1-216ENST00000479135 EPPK1P58107 5090 aaKnown RBP3.72□□□□□ -1.81
EWSR1-216ENST00000479135 LCE2CQ5TA81 110 aa3.71□□□□□ -1.81
EWSR1-216ENST00000479135 MT1FP04733 61 aa3.71□□□□□ -1.82
EWSR1-216ENST00000479135 RNF213Q63HN8 5207 aa3.71□□□□□ -1.82
EWSR1-216ENST00000479135 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
EWSR1-216ENST00000479135 KRTAP19-1Q8IUB9 90 aa3.69□□□□□ -1.82
EWSR1-216ENST00000479135 MUC17Q685J3 4493 aa3.67□□□□□ -1.82
EWSR1-216ENST00000479135 LRP2P98164 4655 aa3.67□□□□□ -1.82
EWSR1-216ENST00000479135 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
EWSR1-216ENST00000479135 KRTAP19-8Q3LI54 63 aa3.65□□□□□ -1.82
EWSR1-216ENST00000479135 DNAH6Q9C0G6 4158 aa3.65□□□□□ -1.83
EWSR1-216ENST00000479135 KRTAP19-2Q3LHN2 52 aa3.64□□□□□ -1.83
EWSR1-216ENST00000479135 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
EWSR1-216ENST00000479135 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
EWSR1-216ENST00000479135 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
EWSR1-216ENST00000479135 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
EWSR1-216ENST00000479135 UBR4Q5T4S7 5183 aa3.59□□□□□ -1.83
EWSR1-216ENST00000479135 LCE5AQ5TCM9 118 aa3.56□□□□□ -1.84
EWSR1-216ENST00000479135 HECTD4Q9Y4D8 3996 aa3.56□□□□□ -1.84
EWSR1-216ENST00000479135 MT1BP07438 61 aa3.51□□□□□ -1.85
EWSR1-216ENST00000479135 MT1XP80297 61 aa3.5□□□□□ -1.85
EWSR1-216ENST00000479135 PKD1P98161 4303 aa3.5□□□□□ -1.85
EWSR1-216ENST00000479135 MT3P25713 68 aa3.5□□□□□ -1.85
EWSR1-216ENST00000479135 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
EWSR1-216ENST00000479135 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms