RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 COX6B2Q6YFQ2 88 aa5.87□□□□□ -1.47
LRRFIP1-211ENST00000478958 DYNC1H1Q14204 4646 aaKnown RBP5.86□□□□□ -1.47
LRRFIP1-211ENST00000478958 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
LRRFIP1-211ENST00000478958 RPS29P62273 56 aaKnown RBP5.81□□□□□ -1.48
LRRFIP1-211ENST00000478958 MYCBP2O75592 4640 aa5.79□□□□□ -1.48
LRRFIP1-211ENST00000478958 A0A0D9SG42 100 aa5.77□□□□□ -1.49
LRRFIP1-211ENST00000478958 SEC61BP60468 96 aaKnown RBP5.76□□□□□ -1.49
LRRFIP1-211ENST00000478958 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
LRRFIP1-211ENST00000478958 APOBP04114 4563 aaKnown RBP5.74□□□□□ -1.49
LRRFIP1-211ENST00000478958 PKHD1L1Q86WI1 4243 aa5.73□□□□□ -1.49
LRRFIP1-211ENST00000478958 KRTAP10-4P60372 401 aaPredicted RBP5.7□□□□□ -1.5
LRRFIP1-211ENST00000478958 HSPG2P98160 4391 aa5.69□□□□□ -1.5
LRRFIP1-211ENST00000478958 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
LRRFIP1-211ENST00000478958 FAT3Q8TDW7 4589 aa5.63□□□□□ -1.51
LRRFIP1-211ENST00000478958 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
LRRFIP1-211ENST00000478958 A0A1B0GVY2 172 aa5.63□□□□□ -1.51
LRRFIP1-211ENST00000478958 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
LRRFIP1-211ENST00000478958 KRTAP3-3Q9BYR6 98 aa5.62□□□□□ -1.51
LRRFIP1-211ENST00000478958 S4R3F8 94 aa5.62□□□□□ -1.51
LRRFIP1-211ENST00000478958 KMT2CQ8NEZ4 4911 aaKnown RBP5.61□□□□□ -1.51
LRRFIP1-211ENST00000478958 TNXBP22105 4242 aa5.58□□□□□ -1.52
LRRFIP1-211ENST00000478958 KRTAP3-2Q9BYR7 98 aa5.57□□□□□ -1.52
LRRFIP1-211ENST00000478958 LPAP08519 4548 aa5.55□□□□□ -1.52
LRRFIP1-211ENST00000478958 XP32Q5T750 250 aa5.55□□□□□ -1.52
LRRFIP1-211ENST00000478958 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
LRRFIP1-211ENST00000478958 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
LRRFIP1-211ENST00000478958 RYR2Q92736 4967 aa5.52□□□□□ -1.53
LRRFIP1-211ENST00000478958 Q5VSD8 79 aa5.51□□□□□ -1.53
LRRFIP1-211ENST00000478958 LRP2P98164 4655 aa5.46□□□□□ -1.54
LRRFIP1-211ENST00000478958 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
LRRFIP1-211ENST00000478958 KIAA1109Q2LD37 5005 aa5.41□□□□□ -1.54
LRRFIP1-211ENST00000478958 KRTAP17-1Q9BYP8 105 aa5.4□□□□□ -1.54
LRRFIP1-211ENST00000478958 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
LRRFIP1-211ENST00000478958 RYR3Q15413 4870 aa5.37□□□□□ -1.55
LRRFIP1-211ENST00000478958 RYR1P21817 5038 aa5.35□□□□□ -1.55
LRRFIP1-211ENST00000478958 MT1HL1P0DM35 61 aa5.32□□□□□ -1.56
LRRFIP1-211ENST00000478958 M0QZ58 72 aa5.28□□□□□ -1.56
LRRFIP1-211ENST00000478958 ABCA13Q86UQ4 5058 aa5.27□□□□□ -1.57
LRRFIP1-211ENST00000478958 R4GN34 69 aa5.25□□□□□ -1.57
LRRFIP1-211ENST00000478958 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
LRRFIP1-211ENST00000478958 EPPK1P58107 5090 aaKnown RBP5.18□□□□□ -1.58
LRRFIP1-211ENST00000478958 J3QL48 77 aa5.18□□□□□ -1.58
LRRFIP1-211ENST00000478958 LORP23490 312 aaPredicted RBP5.18□□□□□ -1.58
LRRFIP1-211ENST00000478958 MUC2Q02817 5179 aa5.12□□□□□ -1.59
LRRFIP1-211ENST00000478958 KRTAP4-5Q9BYR2 181 aa5.12□□□□□ -1.59
LRRFIP1-211ENST00000478958 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
LRRFIP1-211ENST00000478958 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
LRRFIP1-211ENST00000478958 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
LRRFIP1-211ENST00000478958 INE1O15225 51 aa4.96□□□□□ -1.62
LRRFIP1-211ENST00000478958 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
LRRFIP1-211ENST00000478958 HERC2O95714 4834 aa4.92□□□□□ -1.62
LRRFIP1-211ENST00000478958 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
LRRFIP1-211ENST00000478958 FAT4Q6V0I7 4981 aa4.84□□□□□ -1.64
LRRFIP1-211ENST00000478958 PCLOQ9Y6V0 5065 aa4.83□□□□□ -1.64
LRRFIP1-211ENST00000478958 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
LRRFIP1-211ENST00000478958 BIRC6Q9NR09 4857 aa4.81□□□□□ -1.64
LRRFIP1-211ENST00000478958 HERC1Q15751 4861 aa4.77□□□□□ -1.65
LRRFIP1-211ENST00000478958 TNP1P09430 55 aa4.77□□□□□ -1.65
LRRFIP1-211ENST00000478958 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
LRRFIP1-211ENST00000478958 RNF213Q63HN8 5207 aa4.66□□□□□ -1.66
LRRFIP1-211ENST00000478958 M0R2T5 61 aa4.64□□□□□ -1.67
LRRFIP1-211ENST00000478958 HMCN2Q8NDA2 5059 aa4.59□□□□□ -1.67
LRRFIP1-211ENST00000478958 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
LRRFIP1-211ENST00000478958 LCE2CQ5TA81 110 aa4.55□□□□□ -1.68
LRRFIP1-211ENST00000478958 UBR4Q5T4S7 5183 aa4.55□□□□□ -1.68
LRRFIP1-211ENST00000478958 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
LRRFIP1-211ENST00000478958 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
LRRFIP1-211ENST00000478958 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
LRRFIP1-211ENST00000478958 MT1FP04733 61 aa4.45□□□□□ -1.7
LRRFIP1-211ENST00000478958 MT1HP80294 61 aa4.45□□□□□ -1.7
LRRFIP1-211ENST00000478958 MT2AP02795 61 aa4.42□□□□□ -1.7
LRRFIP1-211ENST00000478958 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
LRRFIP1-211ENST00000478958 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
LRRFIP1-211ENST00000478958 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
LRRFIP1-211ENST00000478958 MT1XP80297 61 aa4.31□□□□□ -1.72
LRRFIP1-211ENST00000478958 MT1BP07438 61 aa4.29□□□□□ -1.72
LRRFIP1-211ENST00000478958 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
LRRFIP1-211ENST00000478958 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
LRRFIP1-211ENST00000478958 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
LRRFIP1-211ENST00000478958 USH2AO75445 5202 aa4.26□□□□□ -1.73
LRRFIP1-211ENST00000478958 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
LRRFIP1-211ENST00000478958 KMT2DO14686 5537 aa4.25□□□□□ -1.73
LRRFIP1-211ENST00000478958 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
LRRFIP1-211ENST00000478958 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
LRRFIP1-211ENST00000478958 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
LRRFIP1-211ENST00000478958 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
LRRFIP1-211ENST00000478958 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
LRRFIP1-211ENST00000478958 LCE2BO14633 110 aa4.02□□□□□ -1.77
LRRFIP1-211ENST00000478958 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
LRRFIP1-211ENST00000478958 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
LRRFIP1-211ENST00000478958 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
LRRFIP1-211ENST00000478958 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
LRRFIP1-211ENST00000478958 LCE2AQ5TA79 106 aaPredicted RBP3.89□□□□□ -1.79
LRRFIP1-211ENST00000478958 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
LRRFIP1-211ENST00000478958 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
LRRFIP1-211ENST00000478958 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
LRRFIP1-211ENST00000478958 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
LRRFIP1-211ENST00000478958 MT1LQ93083 61 aa3.73□□□□□ -1.81
LRRFIP1-211ENST00000478958 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
LRRFIP1-211ENST00000478958 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms