RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 SPRR1BP22528 89 aa0.63□□□□□ -2.31
SRRM1-211ENST00000478890 PMAIP1Q13794 54 aa0.63□□□□□ -2.31
SRRM1-211ENST00000478890 COA5Q86WW8 74 aa0.63□□□□□ -2.31
SRRM1-211ENST00000478890 ZCCHC13Q8WW36 166 aaKnown RBP0.63□□□□□ -2.31
SRRM1-211ENST00000478890 LINC00472Q9H8W2 130 aa0.63□□□□□ -2.31
SRRM1-211ENST00000478890 A8MUN3 132 aa0.62□□□□□ -2.31
SRRM1-211ENST00000478890 H7BZZ5 65 aa0.62□□□□□ -2.31
SRRM1-211ENST00000478890 M0R2T5 61 aa0.62□□□□□ -2.31
SRRM1-211ENST00000478890 SPINK7P58062 85 aa0.62□□□□□ -2.31
SRRM1-211ENST00000478890 RPS28P62857 69 aaKnown RBP0.62□□□□□ -2.31
SRRM1-211ENST00000478890 KLKP1Q107X0 134 aa0.62□□□□□ -2.31
SRRM1-211ENST00000478890 LINC01554Q52M75 96 aa0.62□□□□□ -2.31
SRRM1-211ENST00000478890 Q6ZSA8 131 aa0.62□□□□□ -2.31
SRRM1-211ENST00000478890 C20orf166-AS1Q96NR2 134 aa0.62□□□□□ -2.31
SRRM1-211ENST00000478890 CYP4F30PQ9H0H9 118 aa0.62□□□□□ -2.31
SRRM1-211ENST00000478890 DMDP11532 3685 aa0.61□□□□□ -2.31
SRRM1-211ENST00000478890 A0A0D9SG42 100 aa0.61□□□□□ -2.31
SRRM1-211ENST00000478890 FP248Q71RG6 208 aaPredicted RBP0.61□□□□□ -2.31
SRRM1-211ENST00000478890 CYSTM1Q9H1C7 97 aa0.61□□□□□ -2.31
SRRM1-211ENST00000478890 UQCR11O14957 56 aa0.6□□□□□ -2.31
SRRM1-211ENST00000478890 MIR22HGQ0VDD5 57 aa0.6□□□□□ -2.31
SRRM1-211ENST00000478890 ASB16-AS1Q495Z4 193 aa0.6□□□□□ -2.31
SRRM1-211ENST00000478890 CSAG1Q6PB30 78 aa0.6□□□□□ -2.31
SRRM1-211ENST00000478890 KTN1-AS1Q86SY8 53 aa0.6□□□□□ -2.31
SRRM1-211ENST00000478890 S4R3F8 94 aa0.6□□□□□ -2.31
SRRM1-211ENST00000478890 SMG1Q96Q15 3661 aaKnown RBP0.6□□□□□ -2.31
SRRM1-211ENST00000478890 RPS29P62273 56 aaKnown RBP0.59□□□□□ -2.31
SRRM1-211ENST00000478890 Q1T7F1 81 aa0.59□□□□□ -2.31
SRRM1-211ENST00000478890 H1FX-AS1Q4G0G2 97 aa0.59□□□□□ -2.31
SRRM1-211ENST00000478890 Q5XG85 94 aa0.59□□□□□ -2.31
SRRM1-211ENST00000478890 CUBNO60494 3623 aa0.59□□□□□ -2.32
SRRM1-211ENST00000478890 SVEP1Q4LDE5 3571 aa0.58□□□□□ -2.32
SRRM1-211ENST00000478890 RPL37P61927 97 aaKnown RBP0.58□□□□□ -2.32
SRRM1-211ENST00000478890 DMAC1Q96GE9 116 aa0.58□□□□□ -2.32
SRRM1-211ENST00000478890 LINC01558Q9Y6Z2 57 aa0.58□□□□□ -2.32
SRRM1-211ENST00000478890 ZFHX3Q15911 3703 aa0.58□□□□□ -2.32
SRRM1-211ENST00000478890 CSMD1Q96PZ7 3565 aa0.57□□□□□ -2.32
SRRM1-211ENST00000478890 M0QZ58 72 aa0.57□□□□□ -2.32
SRRM1-211ENST00000478890 TPRXLQ17RH7 258 aa0.57□□□□□ -2.32
SRRM1-211ENST00000478890 Q5VV11 94 aa0.57□□□□□ -2.32
SRRM1-211ENST00000478890 SPATA8Q6RVD6 105 aa0.57□□□□□ -2.32
SRRM1-211ENST00000478890 LCA10Q71F78 164 aa0.57□□□□□ -2.32
SRRM1-211ENST00000478890 CDC42SE1Q9NRR8 79 aa0.57□□□□□ -2.32
SRRM1-211ENST00000478890 CRIPTQ9P021 101 aa0.57□□□□□ -2.32
SRRM1-211ENST00000478890 PLAC4Q8WY50 150 aa0.56□□□□□ -2.32
SRRM1-211ENST00000478890 AKAP9Q99996 3911 aa0.56□□□□□ -2.32
SRRM1-211ENST00000478890 SPENQ96T58 3664 aaKnown RBP0.56□□□□□ -2.32
SRRM1-211ENST00000478890 MT1HL1P0DM35 61 aa0.55□□□□□ -2.32
SRRM1-211ENST00000478890 KRTAP10-4P60372 401 aaPredicted RBP0.55□□□□□ -2.32
SRRM1-211ENST00000478890 KRTAP13-4Q3LI77 160 aa0.55□□□□□ -2.32
SRRM1-211ENST00000478890 PRO2289Q9P1D8 64 aa0.55□□□□□ -2.32
SRRM1-211ENST00000478890 TRRAPQ9Y4A5 3859 aa0.54□□□□□ -2.32
SRRM1-211ENST00000478890 KRTAP12-1P59990 96 aa0.54□□□□□ -2.32
SRRM1-211ENST00000478890 ROMO1P60602 79 aa0.54□□□□□ -2.32
SRRM1-211ENST00000478890 KRTAP6-3Q3LI67 103 aa0.54□□□□□ -2.32
SRRM1-211ENST00000478890 VPS13CQ709C8 3753 aa0.53□□□□□ -2.32
SRRM1-211ENST00000478890 NBPF19A0A087WUL8 3843 aa0.53□□□□□ -2.32
SRRM1-211ENST00000478890 A6NN06 94 aa0.52□□□□□ -2.33
SRRM1-211ENST00000478890 H0YAA0 97 aa0.52□□□□□ -2.33
SRRM1-211ENST00000478890 TNP1P09430 55 aa0.51□□□□□ -2.33
SRRM1-211ENST00000478890 ANK2Q01484 3957 aa0.5□□□□□ -2.33
SRRM1-211ENST00000478890 C10orf95Q9H7T3 257 aa0.5□□□□□ -2.33
SRRM1-211ENST00000478890 BSNQ9UPA5 3926 aa0.5□□□□□ -2.33
SRRM1-211ENST00000478890 ANK3Q12955 4377 aaKnown RBP0.49□□□□□ -2.33
SRRM1-211ENST00000478890 GPR98Q8WXG9 6306 aa0.49□□□□□ -2.33
SRRM1-211ENST00000478890 ZNF469Q96JG9 3925 aaPredicted RBP0.48□□□□□ -2.33
SRRM1-211ENST00000478890 CSMD3Q7Z407 3707 aa0.48□□□□□ -2.33
SRRM1-211ENST00000478890 DNAH1Q9P2D7 4330 aa0.48□□□□□ -2.33
SRRM1-211ENST00000478890 ALMS1Q8TCU4 4167 aa0.47□□□□□ -2.33
SRRM1-211ENST00000478890 HUWE1Q7Z6Z7 4374 aaKnown RBP0.47□□□□□ -2.33
SRRM1-211ENST00000478890 MT1HP80294 61 aa0.47□□□□□ -2.33
SRRM1-211ENST00000478890 PRKDCP78527 4128 aaKnown RBP0.47□□□□□ -2.33
SRRM1-211ENST00000478890 MT2AP02795 61 aa0.46□□□□□ -2.34
SRRM1-211ENST00000478890 KRTAP5-10Q6L8G5 202 aa0.46□□□□□ -2.34
SRRM1-211ENST00000478890 VPS13DQ5THJ4 4388 aa0.45□□□□□ -2.34
SRRM1-211ENST00000478890 MT1FP04733 61 aa0.45□□□□□ -2.34
SRRM1-211ENST00000478890 DNAH3Q8TD57 4116 aa0.45□□□□□ -2.34
SRRM1-211ENST00000478890 HECTD4Q9Y4D8 3996 aa0.45□□□□□ -2.34
SRRM1-211ENST00000478890 LYSTQ99698 3801 aa0.44□□□□□ -2.34
SRRM1-211ENST00000478890 DYNC2H1Q8NCM8 4307 aaKnown RBP0.44□□□□□ -2.34
SRRM1-211ENST00000478890 SPRR2GQ9BYE4 73 aa0.44□□□□□ -2.34
SRRM1-211ENST00000478890 PKD1P98161 4303 aa0.44□□□□□ -2.34
SRRM1-211ENST00000478890 PKHD1P08F94 4074 aa0.43□□□□□ -2.34
SRRM1-211ENST00000478890 CMYA5Q8N3K9 4069 aa0.43□□□□□ -2.34
SRRM1-211ENST00000478890 DNAH9Q9NYC9 4486 aa0.43□□□□□ -2.34
SRRM1-211ENST00000478890 INE1O15225 51 aa0.43□□□□□ -2.34
SRRM1-211ENST00000478890 KRTAP8-1Q8IUC2 63 aa0.43□□□□□ -2.34
SRRM1-211ENST00000478890 MUC5BQ9HC84 5762 aaPredicted RBP0.43□□□□□ -2.34
SRRM1-211ENST00000478890 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
SRRM1-211ENST00000478890 DNAH7Q8WXX0 4024 aa0.42□□□□□ -2.34
SRRM1-211ENST00000478890 KRTAP19-2Q3LHN2 52 aa0.42□□□□□ -2.34
SRRM1-211ENST00000478890 KRTAP19-8Q3LI54 63 aa0.42□□□□□ -2.34
SRRM1-211ENST00000478890 KRTAP19-5Q3LI72 72 aa0.42□□□□□ -2.34
SRRM1-211ENST00000478890 DNAH11Q96DT5 4516 aa0.42□□□□□ -2.34
SRRM1-211ENST00000478890 DNHD1Q96M86 4753 aa0.42□□□□□ -2.34
SRRM1-211ENST00000478890 MYCBP2O75592 4640 aa0.42□□□□□ -2.34
SRRM1-211ENST00000478890 MACF1Q9UPN3 7388 aaKnown RBP0.41□□□□□ -2.34
SRRM1-211ENST00000478890 DNAH6Q9C0G6 4158 aa0.41□□□□□ -2.34
SRRM1-211ENST00000478890 MT1BP07438 61 aa0.41□□□□□ -2.34
SRRM1-211ENST00000478890 MT1XP80297 61 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms