RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	IMUP	Q9GZP8	106 aa		4.57	□□□□□ -1.68
SFI1-222	ENST00000478887	C1orf64	Q8NEQ6	169 aa		4.56	□□□□□ -1.68
SFI1-222	ENST00000478887	MT-ATP8	P03928	68 aa		4.55	□□□□□ -1.68
SFI1-222	ENST00000478887	MT1F	P04733	61 aa		4.54	□□□□□ -1.68
SFI1-222	ENST00000478887	MP68	P56378	58 aa		4.52	□□□□□ -1.69
SFI1-222	ENST00000478887	C5orf47	Q569G3	176 aa		4.52	□□□□□ -1.69
SFI1-222	ENST00000478887	LINC00208	Q96KT6	92 aa		4.52	□□□□□ -1.69
SFI1-222	ENST00000478887	SCGB1A1	P11684	91 aa		4.51	□□□□□ -1.69
SFI1-222	ENST00000478887		H3BPC8	53 aa		4.5	□□□□□ -1.69
SFI1-222	ENST00000478887	KRTAP10-10	P60014	251 aa		4.5	□□□□□ -1.69
SFI1-222	ENST00000478887		S4R3F8	94 aa		4.5	□□□□□ -1.69
SFI1-222	ENST00000478887	FAM236A	A0A1B0GUQ0	79 aa		4.48	□□□□□ -1.69
SFI1-222	ENST00000478887	FAM236B	A0A1B0GV22	79 aa		4.48	□□□□□ -1.69
SFI1-222	ENST00000478887	LCA10	Q71F78	164 aa		4.48	□□□□□ -1.69
SFI1-222	ENST00000478887	KRTAP9-3	Q9BYQ3	159 aa		4.48	□□□□□ -1.69
SFI1-222	ENST00000478887	KLKP1	Q107X0	134 aa		4.47	□□□□□ -1.69
SFI1-222	ENST00000478887	SMIM20	Q8N5G0	67 aa		4.46	□□□□□ -1.7
SFI1-222	ENST00000478887		A8MUN3	132 aa		4.45	□□□□□ -1.7
SFI1-222	ENST00000478887	TRAV7	A0A075B6U4	112 aa		4.44	□□□□□ -1.7
SFI1-222	ENST00000478887	CSAG1	Q6PB30	78 aa		4.44	□□□□□ -1.7
SFI1-222	ENST00000478887	KRTAP4-2	Q9BYR5	136 aa		4.44	□□□□□ -1.7
SFI1-222	ENST00000478887	CRCT1	Q9UGL9	99 aa		4.44	□□□□□ -1.7
SFI1-222	ENST00000478887	LCE5A	Q5TCM9	118 aa		4.42	□□□□□ -1.7
SFI1-222	ENST00000478887	KRTAP4-11	Q9BYQ6	195 aa		4.41	□□□□□ -1.7
SFI1-222	ENST00000478887	DMAC1	Q96GE9	116 aa		4.39	□□□□□ -1.71
SFI1-222	ENST00000478887	NDUFC1	O43677	76 aa		4.37	□□□□□ -1.71
SFI1-222	ENST00000478887	SERP2	Q8N6R1	65 aa		4.35	□□□□□ -1.71
SFI1-222	ENST00000478887	USH2A	O75445	5202 aa		4.34	□□□□□ -1.72
SFI1-222	ENST00000478887		H0YAA0	97 aa		4.33	□□□□□ -1.72
SFI1-222	ENST00000478887	SNURF	Q9Y675	71 aa		4.32	□□□□□ -1.72
SFI1-222	ENST00000478887	FSIP2	Q5CZC0	6907 aa		4.31	□□□□□ -1.72
SFI1-222	ENST00000478887	C20orf197	Q8N268	126 aa		4.3	□□□□□ -1.72
SFI1-222	ENST00000478887	SPRR2G	Q9BYE4	73 aa		4.29	□□□□□ -1.72
SFI1-222	ENST00000478887	ACYP2	P14621	99 aa		4.27	□□□□□ -1.73
SFI1-222	ENST00000478887	SPANXA2-OT1	Q8N9U9	137 aa		4.27	□□□□□ -1.73
SFI1-222	ENST00000478887	CRIPT	Q9P021	101 aa		4.27	□□□□□ -1.73
SFI1-222	ENST00000478887	SSPO	A2VEC9	5147 aa		4.27	□□□□□ -1.73
SFI1-222	ENST00000478887	COX7C	P15954	63 aa		4.26	□□□□□ -1.73
SFI1-222	ENST00000478887	KRTAP19-8	Q3LI54	63 aa		4.25	□□□□□ -1.73
SFI1-222	ENST00000478887	KRTAP19-6	Q3LI70	58 aa		4.25	□□□□□ -1.73
SFI1-222	ENST00000478887	ADM2	Q7Z4H4	148 aa		4.24	□□□□□ -1.73
SFI1-222	ENST00000478887	MT1B	P07438	61 aa		4.22	□□□□□ -1.73
SFI1-222	ENST00000478887		Q5VV11	94 aa		4.21	□□□□□ -1.74
SFI1-222	ENST00000478887	SPTSSB	Q8NFR3	76 aa		4.2	□□□□□ -1.74
SFI1-222	ENST00000478887	CHKB-CPT1B	H3BT56	60 aa		4.19	□□□□□ -1.74
SFI1-222	ENST00000478887		P0C880	135 aa		4.19	□□□□□ -1.74
SFI1-222	ENST00000478887		H7BZZ5	65 aa		4.17	□□□□□ -1.74
SFI1-222	ENST00000478887	ANAPC13	Q9BS18	74 aa		4.17	□□□□□ -1.74
SFI1-222	ENST00000478887	CYSTM1	Q9H1C7	97 aa		4.17	□□□□□ -1.74
SFI1-222	ENST00000478887	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.16	□□□□□ -1.74
SFI1-222	ENST00000478887	COA5	Q86WW8	74 aa		4.13	□□□□□ -1.75
SFI1-222	ENST00000478887		R4GN34	69 aa		4.13	□□□□□ -1.75
SFI1-222	ENST00000478887		M0QZ58	72 aa		4.1	□□□□□ -1.75
SFI1-222	ENST00000478887	CCDC179	H3BU77	68 aa		4.09	□□□□□ -1.75
SFI1-222	ENST00000478887	KRTAP10-5	P60370	271 aa		4.09	□□□□□ -1.75
SFI1-222	ENST00000478887		A6NN06	94 aa		4.08	□□□□□ -1.76
SFI1-222	ENST00000478887	ATP5E	P56381	51 aa	Predicted RBP	4.02	□□□□□ -1.77
SFI1-222	ENST00000478887	LINC01554	Q52M75	96 aa		4.01	□□□□□ -1.77
SFI1-222	ENST00000478887	PLAC4	Q8WY50	150 aa		4.01	□□□□□ -1.77
SFI1-222	ENST00000478887	MT1X	P80297	61 aa		3.99	□□□□□ -1.77
SFI1-222	ENST00000478887	KRTAP13-4	Q3LI77	160 aa		3.98	□□□□□ -1.77
SFI1-222	ENST00000478887	PRO2289	Q9P1D8	64 aa		3.98	□□□□□ -1.77
SFI1-222	ENST00000478887	SEC61G	P60059	68 aa		3.97	□□□□□ -1.77
SFI1-222	ENST00000478887	KRTAP23-1	A1A580	65 aa		3.96	□□□□□ -1.78
SFI1-222	ENST00000478887	TMEM258	P61165	79 aa		3.96	□□□□□ -1.78
SFI1-222	ENST00000478887	SERP1	Q9Y6X1	66 aa		3.96	□□□□□ -1.78
SFI1-222	ENST00000478887	KRTAP6-3	Q3LI67	103 aa		3.93	□□□□□ -1.78
SFI1-222	ENST00000478887	MACF1	Q9UPN3	7388 aa	Known RBP	3.93	□□□□□ -1.78
SFI1-222	ENST00000478887		A0A1B0GU33	70 aa		3.9	□□□□□ -1.79
SFI1-222	ENST00000478887		A0A1B0GU69	56 aa		3.9	□□□□□ -1.79
SFI1-222	ENST00000478887	KRTAP12-2	P59991	146 aa		3.88	□□□□□ -1.79
SFI1-222	ENST00000478887	KRTAP5-3	Q6L8H2	238 aa		3.88	□□□□□ -1.79
SFI1-222	ENST00000478887	SPATA8	Q6RVD6	105 aa		3.87	□□□□□ -1.79
SFI1-222	ENST00000478887	KRTAP15-1	Q3LI76	137 aa		3.85	□□□□□ -1.79
SFI1-222	ENST00000478887	LINC01558	Q9Y6Z2	57 aa		3.85	□□□□□ -1.79
SFI1-222	ENST00000478887		A0A0D9SG42	100 aa		3.84	□□□□□ -1.79
SFI1-222	ENST00000478887	KRTAP5-9	P26371	169 aa		3.83	□□□□□ -1.8
SFI1-222	ENST00000478887	PRR15L	Q9BU68	103 aa		3.83	□□□□□ -1.8
SFI1-222	ENST00000478887	SYNE2	Q8WXH0	6885 aa	Known RBP	3.81	□□□□□ -1.8
SFI1-222	ENST00000478887	CAMK2N1	Q7Z7J9	78 aa		3.81	□□□□□ -1.8
SFI1-222	ENST00000478887	SMIM26	A0A096LP01	95 aa		3.8	□□□□□ -1.8
SFI1-222	ENST00000478887	KRTAP12-1	P59990	96 aa		3.8	□□□□□ -1.8
SFI1-222	ENST00000478887	KRTAP10-7	P60409	375 aa	Predicted RBP	3.8	□□□□□ -1.8
SFI1-222	ENST00000478887	KRTAP10-12	P60413	245 aa		3.8	□□□□□ -1.8
SFI1-222	ENST00000478887	SPINT4	Q6UDR6	99 aa		3.77	□□□□□ -1.81
SFI1-222	ENST00000478887		A8MU10	97 aa		3.76	□□□□□ -1.81
SFI1-222	ENST00000478887	KRTAP8-1	Q8IUC2	63 aa		3.76	□□□□□ -1.81
SFI1-222	ENST00000478887	PCP4	P48539	62 aa		3.73	□□□□□ -1.81
SFI1-222	ENST00000478887	UQCR11	O14957	56 aa		3.72	□□□□□ -1.81
SFI1-222	ENST00000478887	SPRR2F	Q96RM1	72 aa		3.72	□□□□□ -1.81
SFI1-222	ENST00000478887	KMT2D	O14686	5537 aa		3.72	□□□□□ -1.81
SFI1-222	ENST00000478887		V9GYY9	64 aa		3.71	□□□□□ -1.82
SFI1-222	ENST00000478887		Q1T7F1	81 aa		3.69	□□□□□ -1.82
SFI1-222	ENST00000478887	MUC12	Q9UKN1	5478 aa		3.68	□□□□□ -1.82
SFI1-222	ENST00000478887	PSPHP1	O15172	72 aa		3.64	□□□□□ -1.83
SFI1-222	ENST00000478887	RPS28	P62857	69 aa	Known RBP	3.64	□□□□□ -1.83
SFI1-222	ENST00000478887	MIR22HG	Q0VDD5	57 aa		3.64	□□□□□ -1.83
SFI1-222	ENST00000478887	SPRR2E	P22531	72 aa		3.63	□□□□□ -1.83
SFI1-222	ENST00000478887	SPRR2B	P35325	72 aa		3.63	□□□□□ -1.83
SFI1-222	ENST00000478887	SPRR2A	P35326	72 aa		3.63	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms