RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, humanhuman

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-222ENST00000478887 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
SFI1-222ENST00000478887 CCDC180Q9P1Z9 1646 aa20.44■□□□□ 0.86
SFI1-222ENST00000478887 ABCC9O60706 1549 aa19.85■□□□□ 0.77
SFI1-222ENST00000478887 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
SFI1-222ENST00000478887 NACADO15069 1562 aa19.18■□□□□ 0.66
SFI1-222ENST00000478887 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
SFI1-222ENST00000478887 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
SFI1-222ENST00000478887 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
SFI1-222ENST00000478887 DCAF8L2P0C7V8 631 aa19.04■□□□□ 0.64
SFI1-222ENST00000478887 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
SFI1-222ENST00000478887 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
SFI1-222ENST00000478887 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
SFI1-222ENST00000478887 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
SFI1-222ENST00000478887 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
SFI1-222ENST00000478887 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
SFI1-222ENST00000478887 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
SFI1-222ENST00000478887 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
SFI1-222ENST00000478887 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
SFI1-222ENST00000478887 CECR2Q9BXF3 1484 aa17.9■□□□□ 0.46
SFI1-222ENST00000478887 SMARCA4P51532 1647 aa17.84■□□□□ 0.45
SFI1-222ENST00000478887 BAZ1AQ9NRL2 1556 aaPredicted RBP17.84■□□□□ 0.45
SFI1-222ENST00000478887 MROH2BQ7Z745 1585 aa17.73■□□□□ 0.43
SFI1-222ENST00000478887 ATAD2BQ9ULI0 1458 aa17.72■□□□□ 0.43
SFI1-222ENST00000478887 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
SFI1-222ENST00000478887 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
SFI1-222ENST00000478887 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
SFI1-222ENST00000478887 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
SFI1-222ENST00000478887 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
SFI1-222ENST00000478887 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
SFI1-222ENST00000478887 WIZO95785 1651 aa17.52■□□□□ 0.39
SFI1-222ENST00000478887 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
SFI1-222ENST00000478887 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
SFI1-222ENST00000478887 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
SFI1-222ENST00000478887 NESP48681 1621 aa17.21■□□□□ 0.35
SFI1-222ENST00000478887 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
SFI1-222ENST00000478887 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
SFI1-222ENST00000478887 CFTRP13569 1480 aa17.11■□□□□ 0.33
SFI1-222ENST00000478887 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
SFI1-222ENST00000478887 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
SFI1-222ENST00000478887 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
SFI1-222ENST00000478887 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
SFI1-222ENST00000478887 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
SFI1-222ENST00000478887 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
SFI1-222ENST00000478887 PRDM2Q13029 1718 aa16.96■□□□□ 0.3
SFI1-222ENST00000478887 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
SFI1-222ENST00000478887 CUX2O14529 1486 aa16.93■□□□□ 0.3
SFI1-222ENST00000478887 MRC2Q9UBG0 1479 aa16.92■□□□□ 0.3
SFI1-222ENST00000478887 WDR62O43379 1518 aa16.87■□□□□ 0.29
SFI1-222ENST00000478887 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
SFI1-222ENST00000478887 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
SFI1-222ENST00000478887 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
SFI1-222ENST00000478887 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
SFI1-222ENST00000478887 CUX1P39880 1505 aa16.63■□□□□ 0.25
SFI1-222ENST00000478887 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
SFI1-222ENST00000478887 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
SFI1-222ENST00000478887 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
SFI1-222ENST00000478887 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
SFI1-222ENST00000478887 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
SFI1-222ENST00000478887 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.24
SFI1-222ENST00000478887 TOP2BQ02880 1626 aa16.52■□□□□ 0.23
SFI1-222ENST00000478887 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
SFI1-222ENST00000478887 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
SFI1-222ENST00000478887 SOGA1O94964 1423 aa16.49■□□□□ 0.23
SFI1-222ENST00000478887 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
SFI1-222ENST00000478887 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.23
SFI1-222ENST00000478887 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
SFI1-222ENST00000478887 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
SFI1-222ENST00000478887 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
SFI1-222ENST00000478887 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
SFI1-222ENST00000478887 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
SFI1-222ENST00000478887 GRIN2BQ13224 1484 aa16.31■□□□□ 0.2
SFI1-222ENST00000478887 GAPVD1Q14C86 1478 aa16.31■□□□□ 0.2
SFI1-222ENST00000478887 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
SFI1-222ENST00000478887 MAGI1Q96QZ7 1491 aaPredicted RBP16.28■□□□□ 0.2
SFI1-222ENST00000478887 PBRM1Q86U86 1689 aa16.27■□□□□ 0.19
SFI1-222ENST00000478887 DNAJC5Q9H3Z4 198 aa16.23■□□□□ 0.19
SFI1-222ENST00000478887 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
SFI1-222ENST00000478887 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
SFI1-222ENST00000478887 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
SFI1-222ENST00000478887 CHD1O14646 1710 aa16.19■□□□□ 0.18
SFI1-222ENST00000478887 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
SFI1-222ENST00000478887 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
SFI1-222ENST00000478887 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
SFI1-222ENST00000478887 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
SFI1-222ENST00000478887 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
SFI1-222ENST00000478887 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
SFI1-222ENST00000478887 FBLN2P98095 1184 aa16.11■□□□□ 0.17
SFI1-222ENST00000478887 IGF1RP08069 1367 aa16.11■□□□□ 0.17
SFI1-222ENST00000478887 CUL7Q14999 1698 aa16.09■□□□□ 0.17
SFI1-222ENST00000478887 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
SFI1-222ENST00000478887 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
SFI1-222ENST00000478887 NUP160Q12769 1436 aa16.05■□□□□ 0.16
SFI1-222ENST00000478887 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
SFI1-222ENST00000478887 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
SFI1-222ENST00000478887 EEA1Q15075 1411 aa15.97■□□□□ 0.15
SFI1-222ENST00000478887 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
SFI1-222ENST00000478887 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
SFI1-222ENST00000478887 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
SFI1-222ENST00000478887 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
SFI1-222ENST00000478887 PRXQ9BXM0 1461 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms