RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-204ENST00000478061 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
RBM28-204ENST00000478061 SERP2Q8N6R1 65 aa6.02□□□□□ -1.45
RBM28-204ENST00000478061 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
RBM28-204ENST00000478061 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
RBM28-204ENST00000478061 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
RBM28-204ENST00000478061 NDUFC1O43677 76 aa5.96□□□□□ -1.46
RBM28-204ENST00000478061 C20orf197Q8N268 126 aa5.96□□□□□ -1.46
RBM28-204ENST00000478061 LCE2BO14633 110 aa5.92□□□□□ -1.46
RBM28-204ENST00000478061 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
RBM28-204ENST00000478061 COX7CP15954 63 aa5.9□□□□□ -1.46
RBM28-204ENST00000478061 FSIP2Q5CZC0 6907 aa5.88□□□□□ -1.47
RBM28-204ENST00000478061 ACYP2P14621 99 aa5.87□□□□□ -1.47
RBM28-204ENST00000478061 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
RBM28-204ENST00000478061 USH2AO75445 5202 aa5.86□□□□□ -1.47
RBM28-204ENST00000478061 H0YAA0 97 aa5.83□□□□□ -1.48
RBM28-204ENST00000478061 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
RBM28-204ENST00000478061 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
RBM28-204ENST00000478061 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
RBM28-204ENST00000478061 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
RBM28-204ENST00000478061 ADM2Q7Z4H4 148 aa5.78□□□□□ -1.48
RBM28-204ENST00000478061 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
RBM28-204ENST00000478061 CHKB-CPT1BH3BT56 60 aa5.76□□□□□ -1.49
RBM28-204ENST00000478061 H7BZZ5 65 aa5.76□□□□□ -1.49
RBM28-204ENST00000478061 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
RBM28-204ENST00000478061 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
RBM28-204ENST00000478061 SPTSSBQ8NFR3 76 aa5.74□□□□□ -1.49
RBM28-204ENST00000478061 PCP4P48539 62 aa5.72□□□□□ -1.49
RBM28-204ENST00000478061 CCDC179H3BU77 68 aa5.71□□□□□ -1.5
RBM28-204ENST00000478061 P0C880 135 aa5.71□□□□□ -1.5
RBM28-204ENST00000478061 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
RBM28-204ENST00000478061 COA5Q86WW8 74 aa5.69□□□□□ -1.5
RBM28-204ENST00000478061 MT1BP07438 61 aa5.67□□□□□ -1.5
RBM28-204ENST00000478061 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
RBM28-204ENST00000478061 Q5VV11 94 aa5.65□□□□□ -1.5
RBM28-204ENST00000478061 FCGBPQ9Y6R7 5405 aaPredicted RBP5.62□□□□□ -1.51
RBM28-204ENST00000478061 R4GN34 69 aa5.6□□□□□ -1.51
RBM28-204ENST00000478061 M0QZ58 72 aa5.58□□□□□ -1.52
RBM28-204ENST00000478061 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
RBM28-204ENST00000478061 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
RBM28-204ENST00000478061 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.51□□□□□ -1.53
RBM28-204ENST00000478061 TMEM258P61165 79 aa5.5□□□□□ -1.53
RBM28-204ENST00000478061 LINC01554Q52M75 96 aa5.49□□□□□ -1.53
RBM28-204ENST00000478061 A6NN06 94 aa5.48□□□□□ -1.53
RBM28-204ENST00000478061 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
RBM28-204ENST00000478061 SEC61GP60059 68 aa5.46□□□□□ -1.54
RBM28-204ENST00000478061 PLAC4Q8WY50 150 aa5.45□□□□□ -1.54
RBM28-204ENST00000478061 SERP1Q9Y6X1 66 aa5.45□□□□□ -1.54
RBM28-204ENST00000478061 KRTAP13-4Q3LI77 160 aa5.44□□□□□ -1.54
RBM28-204ENST00000478061 A0A1B0GU69 56 aa5.38□□□□□ -1.55
RBM28-204ENST00000478061 MT1XP80297 61 aa5.38□□□□□ -1.55
RBM28-204ENST00000478061 A0A1B0GU33 70 aa5.36□□□□□ -1.55
RBM28-204ENST00000478061 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
RBM28-204ENST00000478061 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
RBM28-204ENST00000478061 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
RBM28-204ENST00000478061 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
RBM28-204ENST00000478061 A0A0D9SG42 100 aa5.28□□□□□ -1.56
RBM28-204ENST00000478061 PRR15LQ9BU68 103 aa5.28□□□□□ -1.56
RBM28-204ENST00000478061 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
RBM28-204ENST00000478061 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
RBM28-204ENST00000478061 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
RBM28-204ENST00000478061 A8MU10 97 aa5.19□□□□□ -1.58
RBM28-204ENST00000478061 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
RBM28-204ENST00000478061 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
RBM28-204ENST00000478061 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
RBM28-204ENST00000478061 SPINT4Q6UDR6 99 aa5.18□□□□□ -1.58
RBM28-204ENST00000478061 Q1T7F1 81 aa5.14□□□□□ -1.59
RBM28-204ENST00000478061 V9GYY9 64 aa5.14□□□□□ -1.59
RBM28-204ENST00000478061 KRTAP10-7P60409 375 aaPredicted RBP5.13□□□□□ -1.59
RBM28-204ENST00000478061 UQCR11O14957 56 aa5.12□□□□□ -1.59
RBM28-204ENST00000478061 PSPHP1O15172 72 aa5.1□□□□□ -1.59
RBM28-204ENST00000478061 KRTAP10-12P60413 245 aa5.1□□□□□ -1.59
RBM28-204ENST00000478061 RPS28P62857 69 aaKnown RBP5.1□□□□□ -1.59
RBM28-204ENST00000478061 KMT2DO14686 5537 aa5.07□□□□□ -1.6
RBM28-204ENST00000478061 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
RBM28-204ENST00000478061 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
RBM28-204ENST00000478061 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
RBM28-204ENST00000478061 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
RBM28-204ENST00000478061 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
RBM28-204ENST00000478061 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
RBM28-204ENST00000478061 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
RBM28-204ENST00000478061 SPRR2FQ96RM1 72 aa4.97□□□□□ -1.61
RBM28-204ENST00000478061 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
RBM28-204ENST00000478061 C10orf95Q9H7T3 257 aa4.95□□□□□ -1.62
RBM28-204ENST00000478061 NEBP20929 6669 aa4.94□□□□□ -1.62
RBM28-204ENST00000478061 H3BS24 57 aa4.93□□□□□ -1.62
RBM28-204ENST00000478061 A6NED7 52 aa4.92□□□□□ -1.62
RBM28-204ENST00000478061 MDN1Q9NU22 5596 aa4.9□□□□□ -1.62
RBM28-204ENST00000478061 K7ERS5 55 aa4.86□□□□□ -1.63
RBM28-204ENST00000478061 TNP1P09430 55 aa4.86□□□□□ -1.63
RBM28-204ENST00000478061 SPRR2EP22531 72 aa4.84□□□□□ -1.63
RBM28-204ENST00000478061 SPRR2BP35325 72 aa4.84□□□□□ -1.63
RBM28-204ENST00000478061 SPRR2AP35326 72 aa4.84□□□□□ -1.63
RBM28-204ENST00000478061 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
RBM28-204ENST00000478061 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
RBM28-204ENST00000478061 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
RBM28-204ENST00000478061 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
RBM28-204ENST00000478061 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
RBM28-204ENST00000478061 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
RBM28-204ENST00000478061 MT1EP04732 61 aa4.74□□□□□ -1.65
RBM28-204ENST00000478061 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms