RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 LINC01558Q9Y6Z2 57 aa6.04□□□□□ -1.44
PRPF39-203ENST00000477626 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
PRPF39-203ENST00000477626 FAT4Q6V0I7 4981 aa6□□□□□ -1.45
PRPF39-203ENST00000477626 Q5VV11 94 aa5.99□□□□□ -1.45
PRPF39-203ENST00000477626 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
PRPF39-203ENST00000477626 LCA10Q71F78 164 aa5.98□□□□□ -1.45
PRPF39-203ENST00000477626 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
PRPF39-203ENST00000477626 H1FX-AS1Q4G0G2 97 aa5.94□□□□□ -1.46
PRPF39-203ENST00000477626 KRTAP10-6P60371 365 aaPredicted RBP5.9□□□□□ -1.47
PRPF39-203ENST00000477626 V9GYY9 64 aa5.89□□□□□ -1.47
PRPF39-203ENST00000477626 S4R3F8 94 aa5.84□□□□□ -1.47
PRPF39-203ENST00000477626 PSPHP1O15172 72 aa5.82□□□□□ -1.48
PRPF39-203ENST00000477626 H0YAA0 97 aa5.81□□□□□ -1.48
PRPF39-203ENST00000477626 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
PRPF39-203ENST00000477626 RBM12B-AS1Q9P1G2 102 aa5.8□□□□□ -1.48
PRPF39-203ENST00000477626 A8MU10 97 aa5.79□□□□□ -1.48
PRPF39-203ENST00000477626 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
PRPF39-203ENST00000477626 MT1HP80294 61 aa5.74□□□□□ -1.49
PRPF39-203ENST00000477626 SPTSSBQ8NFR3 76 aa5.73□□□□□ -1.49
PRPF39-203ENST00000477626 KRTAP13-4Q3LI77 160 aa5.73□□□□□ -1.49
PRPF39-203ENST00000477626 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
PRPF39-203ENST00000477626 A0A1B0GU69 56 aa5.71□□□□□ -1.5
PRPF39-203ENST00000477626 P0C880 135 aa5.7□□□□□ -1.5
PRPF39-203ENST00000477626 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
PRPF39-203ENST00000477626 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
PRPF39-203ENST00000477626 CSAG1Q6PB30 78 aa5.63□□□□□ -1.51
PRPF39-203ENST00000477626 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
PRPF39-203ENST00000477626 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
PRPF39-203ENST00000477626 ADM2Q7Z4H4 148 aa5.6□□□□□ -1.51
PRPF39-203ENST00000477626 LCE2AQ5TA79 106 aaPredicted RBP5.59□□□□□ -1.51
PRPF39-203ENST00000477626 A0A1B0GU33 70 aa5.58□□□□□ -1.52
PRPF39-203ENST00000477626 UQCR11O14957 56 aa5.57□□□□□ -1.52
PRPF39-203ENST00000477626 A6NED7 52 aa5.55□□□□□ -1.52
PRPF39-203ENST00000477626 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
PRPF39-203ENST00000477626 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
PRPF39-203ENST00000477626 A6NN06 94 aa5.52□□□□□ -1.53
PRPF39-203ENST00000477626 MT2AP02795 61 aa5.51□□□□□ -1.53
PRPF39-203ENST00000477626 MT1FP04733 61 aa5.5□□□□□ -1.53
PRPF39-203ENST00000477626 SEC61GP60059 68 aa5.49□□□□□ -1.53
PRPF39-203ENST00000477626 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
PRPF39-203ENST00000477626 SPRR2GQ9BYE4 73 aa5.48□□□□□ -1.53
PRPF39-203ENST00000477626 M0QZ58 72 aa5.46□□□□□ -1.54
PRPF39-203ENST00000477626 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
PRPF39-203ENST00000477626 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
PRPF39-203ENST00000477626 M0R2T5 61 aa5.43□□□□□ -1.54
PRPF39-203ENST00000477626 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
PRPF39-203ENST00000477626 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
PRPF39-203ENST00000477626 CRIPTQ9P021 101 aa5.4□□□□□ -1.54
PRPF39-203ENST00000477626 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
PRPF39-203ENST00000477626 MT1BP07438 61 aa5.27□□□□□ -1.57
PRPF39-203ENST00000477626 R4GN34 69 aa5.27□□□□□ -1.57
PRPF39-203ENST00000477626 KRTAP10-10P60014 251 aa5.24□□□□□ -1.57
PRPF39-203ENST00000477626 A0A0D9SG42 100 aa5.24□□□□□ -1.57
PRPF39-203ENST00000477626 LCE2BO14633 110 aa5.23□□□□□ -1.57
PRPF39-203ENST00000477626 PMAIP1Q13794 54 aa5.23□□□□□ -1.57
PRPF39-203ENST00000477626 USH2AO75445 5202 aa5.18□□□□□ -1.58
PRPF39-203ENST00000477626 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
PRPF39-203ENST00000477626 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
PRPF39-203ENST00000477626 SSPOA2VEC9 5147 aa5.15□□□□□ -1.58
PRPF39-203ENST00000477626 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
PRPF39-203ENST00000477626 MT1XP80297 61 aa5.11□□□□□ -1.59
PRPF39-203ENST00000477626 ROMO1P60602 79 aa5.09□□□□□ -1.59
PRPF39-203ENST00000477626 LINC01554Q52M75 96 aa5.06□□□□□ -1.6
PRPF39-203ENST00000477626 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
PRPF39-203ENST00000477626 LCE2DQ5TA82 110 aaPredicted RBP5.05□□□□□ -1.6
PRPF39-203ENST00000477626 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
PRPF39-203ENST00000477626 K7ERS5 55 aa5□□□□□ -1.61
PRPF39-203ENST00000477626 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
PRPF39-203ENST00000477626 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
PRPF39-203ENST00000477626 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
PRPF39-203ENST00000477626 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
PRPF39-203ENST00000477626 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
PRPF39-203ENST00000477626 KRTAP19-6Q3LI70 58 aa4.88□□□□□ -1.63
PRPF39-203ENST00000477626 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
PRPF39-203ENST00000477626 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
PRPF39-203ENST00000477626 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
PRPF39-203ENST00000477626 KMT2DO14686 5537 aa4.79□□□□□ -1.64
PRPF39-203ENST00000477626 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
PRPF39-203ENST00000477626 TNP1P09430 55 aa4.73□□□□□ -1.65
PRPF39-203ENST00000477626 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
PRPF39-203ENST00000477626 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
PRPF39-203ENST00000477626 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
PRPF39-203ENST00000477626 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
PRPF39-203ENST00000477626 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
PRPF39-203ENST00000477626 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
PRPF39-203ENST00000477626 KRTAP4-8Q9BYQ9 185 aa4.62□□□□□ -1.67
PRPF39-203ENST00000477626 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
PRPF39-203ENST00000477626 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
PRPF39-203ENST00000477626 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
PRPF39-203ENST00000477626 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
PRPF39-203ENST00000477626 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
PRPF39-203ENST00000477626 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
PRPF39-203ENST00000477626 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
PRPF39-203ENST00000477626 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
PRPF39-203ENST00000477626 MT1EP04732 61 aa4.45□□□□□ -1.7
PRPF39-203ENST00000477626 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
PRPF39-203ENST00000477626 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
PRPF39-203ENST00000477626 MT1LQ93083 61 aa4.36□□□□□ -1.71
PRPF39-203ENST00000477626 MUC12Q9UKN1 5478 aa4.33□□□□□ -1.72
PRPF39-203ENST00000477626 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms