RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
SMG5-204ENST00000476954 NAA38Q9BRA0 125 aaKnown RBP6.1□□□□□ -1.43
SMG5-204ENST00000476954 MT4P47944 62 aa6.08□□□□□ -1.44
SMG5-204ENST00000476954 A8MUN3 132 aa6.07□□□□□ -1.44
SMG5-204ENST00000476954 A0A087WVE0 104 aa6.06□□□□□ -1.44
SMG5-204ENST00000476954 C9orf118A6NHY6 69 aa6.06□□□□□ -1.44
SMG5-204ENST00000476954 PSMB2P49721 201 aa6.06□□□□□ -1.44
SMG5-204ENST00000476954 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
SMG5-204ENST00000476954 A0A1B0GV90 55 aa6.03□□□□□ -1.44
SMG5-204ENST00000476954 A0A1W2PPM0 123 aa6.02□□□□□ -1.45
SMG5-204ENST00000476954 HCG22E2RYF7 251 aa6.02□□□□□ -1.45
SMG5-204ENST00000476954 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
SMG5-204ENST00000476954 PDE6GP18545 87 aa5.98□□□□□ -1.45
SMG5-204ENST00000476954 NREPQ16612 68 aa5.98□□□□□ -1.45
SMG5-204ENST00000476954 K7EP34 96 aa5.97□□□□□ -1.45
SMG5-204ENST00000476954 BAALC-AS2P0C853 105 aa5.97□□□□□ -1.45
SMG5-204ENST00000476954 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
SMG5-204ENST00000476954 COX6CP09669 75 aa5.96□□□□□ -1.46
SMG5-204ENST00000476954 SPCS1Q9Y6A9 102 aa5.96□□□□□ -1.46
SMG5-204ENST00000476954 A0A1B0GW54 56 aa5.95□□□□□ -1.46
SMG5-204ENST00000476954 LOC110117498A0A087WWA1 95 aa5.94□□□□□ -1.46
SMG5-204ENST00000476954 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
SMG5-204ENST00000476954 PRO0461Q9UI25 63 aa5.93□□□□□ -1.46
SMG5-204ENST00000476954 SCGB1C2P0DMR2 95 aa5.92□□□□□ -1.46
SMG5-204ENST00000476954 CXCL6P80162 114 aa5.92□□□□□ -1.46
SMG5-204ENST00000476954 CASC2Q6XLA1 102 aa5.92□□□□□ -1.46
SMG5-204ENST00000476954 H0YAA0 97 aa5.91□□□□□ -1.46
SMG5-204ENST00000476954 ADM2Q7Z4H4 148 aa5.91□□□□□ -1.46
SMG5-204ENST00000476954 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
SMG5-204ENST00000476954 ATXN8Q156A1 80 aa5.9□□□□□ -1.46
SMG5-204ENST00000476954 Q8N9L7 120 aa5.89□□□□□ -1.47
SMG5-204ENST00000476954 C14orf132Q9NPU4 83 aa5.89□□□□□ -1.47
SMG5-204ENST00000476954 GTF2H5Q6ZYL4 71 aa5.88□□□□□ -1.47
SMG5-204ENST00000476954 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
SMG5-204ENST00000476954 JMJD7-PLA2G4BH0Y9G9 81 aa5.84□□□□□ -1.47
SMG5-204ENST00000476954 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
SMG5-204ENST00000476954 H3BT86 120 aa5.83□□□□□ -1.48
SMG5-204ENST00000476954 KRTAP19-3Q7Z4W3 81 aa5.83□□□□□ -1.48
SMG5-204ENST00000476954 F8W1H4 67 aa5.8□□□□□ -1.48
SMG5-204ENST00000476954 BPY2O14599 106 aa5.8□□□□□ -1.48
SMG5-204ENST00000476954 ETDBQ3ZM63 59 aa5.78□□□□□ -1.48
SMG5-204ENST00000476954 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
SMG5-204ENST00000476954 CYSTM1Q9H1C7 97 aa5.77□□□□□ -1.49
SMG5-204ENST00000476954 R4GN34 69 aa5.77□□□□□ -1.49
SMG5-204ENST00000476954 NDUFC1O43677 76 aa5.75□□□□□ -1.49
SMG5-204ENST00000476954 MT1EP04732 61 aa5.74□□□□□ -1.49
SMG5-204ENST00000476954 M0QZ58 72 aa5.73□□□□□ -1.49
SMG5-204ENST00000476954 LINC01554Q52M75 96 aa5.73□□□□□ -1.49
SMG5-204ENST00000476954 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
SMG5-204ENST00000476954 P0C880 135 aa5.71□□□□□ -1.5
SMG5-204ENST00000476954 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
SMG5-204ENST00000476954 FAM240AA0A1B0GVK7 77 aa5.6□□□□□ -1.51
SMG5-204ENST00000476954 MT1GP13640 62 aa5.58□□□□□ -1.52
SMG5-204ENST00000476954 K7ERU9 68 aa5.57□□□□□ -1.52
SMG5-204ENST00000476954 J3QR89 54 aa5.55□□□□□ -1.52
SMG5-204ENST00000476954 ACYP1P07311 99 aa5.54□□□□□ -1.52
SMG5-204ENST00000476954 MT1MQ8N339 61 aa5.54□□□□□ -1.52
SMG5-204ENST00000476954 TP53AIP1Q9HCN2 124 aa5.54□□□□□ -1.52
SMG5-204ENST00000476954 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
SMG5-204ENST00000476954 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
SMG5-204ENST00000476954 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
SMG5-204ENST00000476954 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
SMG5-204ENST00000476954 AHNAKQ09666 5890 aaKnown RBP5.47□□□□□ -1.53
SMG5-204ENST00000476954 KRTAP20-2Q3LI61 65 aa5.47□□□□□ -1.53
SMG5-204ENST00000476954 LINC00643Q86TS7 51 aa5.47□□□□□ -1.53
SMG5-204ENST00000476954 UBL5Q9BZL1 73 aa5.47□□□□□ -1.53
SMG5-204ENST00000476954 MT-ATP8P03928 68 aa5.46□□□□□ -1.54
SMG5-204ENST00000476954 LOC101927531A0A1B0GV80 90 aa5.44□□□□□ -1.54
SMG5-204ENST00000476954 TRAV22A0A0B4J277 110 aa5.43□□□□□ -1.54
SMG5-204ENST00000476954 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
SMG5-204ENST00000476954 ATP5EP2Q5VTU8 51 aa5.42□□□□□ -1.54
SMG5-204ENST00000476954 MUC5ACP98088 5654 aa5.35□□□□□ -1.55
SMG5-204ENST00000476954 MT1LQ93083 61 aa5.35□□□□□ -1.55
SMG5-204ENST00000476954 HIST1H4AP62805 103 aaKnown RBP5.33□□□□□ -1.56
SMG5-204ENST00000476954 MUC5BQ9HC84 5762 aaPredicted RBP5.26□□□□□ -1.57
SMG5-204ENST00000476954 A0A0D9SG42 100 aa5.22□□□□□ -1.57
SMG5-204ENST00000476954 H0Y9P7 68 aa5.22□□□□□ -1.57
SMG5-204ENST00000476954 OCR1Q9BZK8 76 aa5.22□□□□□ -1.57
SMG5-204ENST00000476954 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
SMG5-204ENST00000476954 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
SMG5-204ENST00000476954 ATOX1O00244 68 aa5.17□□□□□ -1.58
SMG5-204ENST00000476954 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
SMG5-204ENST00000476954 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
SMG5-204ENST00000476954 TRAV7A0A075B6U4 112 aa5.14□□□□□ -1.59
SMG5-204ENST00000476954 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
SMG5-204ENST00000476954 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
SMG5-204ENST00000476954 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
SMG5-204ENST00000476954 UQCRQO14949 82 aa5.12□□□□□ -1.59
SMG5-204ENST00000476954 SERP2Q8N6R1 65 aa5.12□□□□□ -1.59
SMG5-204ENST00000476954 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
SMG5-204ENST00000476954 SMIM20Q8N5G0 67 aa5.1□□□□□ -1.59
SMG5-204ENST00000476954 ANAPC13Q9BS18 74 aa5.1□□□□□ -1.59
SMG5-204ENST00000476954 COX7CP15954 63 aa5.09□□□□□ -1.59
SMG5-204ENST00000476954 LINC00208Q96KT6 92 aa5.07□□□□□ -1.6
SMG5-204ENST00000476954 CCDC179H3BU77 68 aa5.06□□□□□ -1.6
SMG5-204ENST00000476954 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
SMG5-204ENST00000476954 SNURFQ9Y675 71 aa5.03□□□□□ -1.6
SMG5-204ENST00000476954 PCP4P48539 62 aa5.02□□□□□ -1.61
SMG5-204ENST00000476954 H3BPC8 53 aa5.01□□□□□ -1.61
SMG5-204ENST00000476954 MP68P56378 58 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms