RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 LCE2AQ5TA79 106 aaPredicted RBP10.07□□□□□ -0.8
NPM3-204ENST00000474993 H7BZZ5 65 aa10.06□□□□□ -0.8
NPM3-204ENST00000474993 ACYP2P14621 99 aa10.06□□□□□ -0.8
NPM3-204ENST00000474993 FLGP20930 4061 aaPredicted RBP10.05□□□□□ -0.8
NPM3-204ENST00000474993 CYSTM1Q9H1C7 97 aa10.01□□□□□ -0.81
NPM3-204ENST00000474993 LCA10Q71F78 164 aa9.97□□□□□ -0.81
NPM3-204ENST00000474993 CSAG1Q6PB30 78 aa9.95□□□□□ -0.82
NPM3-204ENST00000474993 ATP5EP56381 51 aaPredicted RBP9.91□□□□□ -0.82
NPM3-204ENST00000474993 PCP4P48539 62 aa9.9□□□□□ -0.82
NPM3-204ENST00000474993 CHKB-CPT1BH3BT56 60 aa9.89□□□□□ -0.83
NPM3-204ENST00000474993 TMEM258P61165 79 aa9.87□□□□□ -0.83
NPM3-204ENST00000474993 KRTAP10-6P60371 365 aaPredicted RBP9.86□□□□□ -0.83
NPM3-204ENST00000474993 SPTSSBQ8NFR3 76 aa9.86□□□□□ -0.83
NPM3-204ENST00000474993 LORP23490 312 aaPredicted RBP9.81□□□□□ -0.84
NPM3-204ENST00000474993 COA5Q86WW8 74 aa9.79□□□□□ -0.84
NPM3-204ENST00000474993 KRTAP9-8Q9BYQ0 159 aa9.7□□□□□ -0.86
NPM3-204ENST00000474993 FSIP2Q5CZC0 6907 aa9.69□□□□□ -0.86
NPM3-204ENST00000474993 H0YAA0 97 aa9.66□□□□□ -0.86
NPM3-204ENST00000474993 MT2AP02795 61 aa9.64□□□□□ -0.87
NPM3-204ENST00000474993 KRTAP10-10P60014 251 aa9.61□□□□□ -0.87
NPM3-204ENST00000474993 SVIPQ8NHG7 77 aa9.56□□□□□ -0.88
NPM3-204ENST00000474993 SERP1Q9Y6X1 66 aa9.56□□□□□ -0.88
NPM3-204ENST00000474993 MT1FP04733 61 aa9.55□□□□□ -0.88
NPM3-204ENST00000474993 ADM2Q7Z4H4 148 aa9.55□□□□□ -0.88
NPM3-204ENST00000474993 CRCT1Q9UGL9 99 aa9.52□□□□□ -0.89
NPM3-204ENST00000474993 SEC61GP60059 68 aa9.47□□□□□ -0.89
NPM3-204ENST00000474993 CRIPTQ9P021 101 aa9.46□□□□□ -0.9
NPM3-204ENST00000474993 KRTAP9-3Q9BYQ3 159 aa9.38□□□□□ -0.91
NPM3-204ENST00000474993 P0C880 135 aa9.37□□□□□ -0.91
NPM3-204ENST00000474993 RPS28P62857 69 aaKnown RBP9.34□□□□□ -0.91
NPM3-204ENST00000474993 A0A1B0GU69 56 aa9.32□□□□□ -0.92
NPM3-204ENST00000474993 PRR15LQ9BU68 103 aa9.3□□□□□ -0.92
NPM3-204ENST00000474993 LINC01558Q9Y6Z2 57 aa9.29□□□□□ -0.92
NPM3-204ENST00000474993 R4GN34 69 aa9.29□□□□□ -0.92
NPM3-204ENST00000474993 V9GYY9 64 aa9.27□□□□□ -0.93
NPM3-204ENST00000474993 SPRR2GQ9BYE4 73 aa9.26□□□□□ -0.93
NPM3-204ENST00000474993 SMIM26A0A096LP01 95 aa9.25□□□□□ -0.93
NPM3-204ENST00000474993 M0QZ58 72 aa9.23□□□□□ -0.93
NPM3-204ENST00000474993 KRTAP19-1Q8IUB9 90 aa9.22□□□□□ -0.93
NPM3-204ENST00000474993 A0A1B0GU33 70 aa9.17□□□□□ -0.94
NPM3-204ENST00000474993 Q1T7F1 81 aa9.16□□□□□ -0.94
NPM3-204ENST00000474993 LCE2BO14633 110 aa9.15□□□□□ -0.94
NPM3-204ENST00000474993 KRTAP9-7A8MTY7 169 aa9.12□□□□□ -0.95
NPM3-204ENST00000474993 Q5VV11 94 aa9.1□□□□□ -0.95
NPM3-204ENST00000474993 KRTAP19-8Q3LI54 63 aa9.09□□□□□ -0.95
NPM3-204ENST00000474993 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
NPM3-204ENST00000474993 PSPHP1O15172 72 aa8.99□□□□□ -0.97
NPM3-204ENST00000474993 KRTAP13-4Q3LI77 160 aa8.99□□□□□ -0.97
NPM3-204ENST00000474993 UQCR11O14957 56 aa8.97□□□□□ -0.97
NPM3-204ENST00000474993 SPATA8Q6RVD6 105 aa8.96□□□□□ -0.98
NPM3-204ENST00000474993 PLAC4Q8WY50 150 aa8.95□□□□□ -0.98
NPM3-204ENST00000474993 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.94□□□□□ -0.98
NPM3-204ENST00000474993 MT1BP07438 61 aa8.94□□□□□ -0.98
NPM3-204ENST00000474993 A6NN06 94 aa8.93□□□□□ -0.98
NPM3-204ENST00000474993 USH2AO75445 5202 aa8.91□□□□□ -0.98
NPM3-204ENST00000474993 A0A0D9SG42 100 aa8.87□□□□□ -0.99
NPM3-204ENST00000474993 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
NPM3-204ENST00000474993 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
NPM3-204ENST00000474993 A6NED7 52 aa8.77□□□□□ -1.01
NPM3-204ENST00000474993 A8MU10 97 aa8.75□□□□□ -1.01
NPM3-204ENST00000474993 SPINT4Q6UDR6 99 aa8.73□□□□□ -1.01
NPM3-204ENST00000474993 KRTAP12-1P59990 96 aa8.69□□□□□ -1.02
NPM3-204ENST00000474993 PRO2289Q9P1D8 64 aa8.69□□□□□ -1.02
NPM3-204ENST00000474993 SSPOA2VEC9 5147 aa8.68□□□□□ -1.02
NPM3-204ENST00000474993 CAMK2N1Q7Z7J9 78 aa8.67□□□□□ -1.02
NPM3-204ENST00000474993 KRTAP10-5P60370 271 aa8.64□□□□□ -1.03
NPM3-204ENST00000474993 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
NPM3-204ENST00000474993 K7ERS5 55 aa8.61□□□□□ -1.03
NPM3-204ENST00000474993 MT1XP80297 61 aa8.56□□□□□ -1.04
NPM3-204ENST00000474993 SYNE2Q8WXH0 6885 aaKnown RBP8.55□□□□□ -1.04
NPM3-204ENST00000474993 CDC42SE1Q9NRR8 79 aa8.54□□□□□ -1.04
NPM3-204ENST00000474993 FCGBPQ9Y6R7 5405 aaPredicted RBP8.53□□□□□ -1.04
NPM3-204ENST00000474993 MACF1Q9UPN3 7388 aaKnown RBP8.43□□□□□ -1.06
NPM3-204ENST00000474993 BRK1Q8WUW1 75 aa8.31□□□□□ -1.08
NPM3-204ENST00000474993 C10orf95Q9H7T3 257 aa8.23□□□□□ -1.09
NPM3-204ENST00000474993 TNP1P09430 55 aa8.17□□□□□ -1.1
NPM3-204ENST00000474993 KRTAP10-7P60409 375 aaPredicted RBP8.17□□□□□ -1.1
NPM3-204ENST00000474993 KRTAP10-12P60413 245 aa8.16□□□□□ -1.1
NPM3-204ENST00000474993 NEBP20929 6669 aa8.11□□□□□ -1.11
NPM3-204ENST00000474993 ROMO1P60602 79 aa8.07□□□□□ -1.12
NPM3-204ENST00000474993 KRTAP25-1Q3LHN0 102 aa8.06□□□□□ -1.12
NPM3-204ENST00000474993 KRTAP8-1Q8IUC2 63 aa7.97□□□□□ -1.13
NPM3-204ENST00000474993 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
NPM3-204ENST00000474993 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
NPM3-204ENST00000474993 KRTAP4-8Q9BYQ9 185 aa7.94□□□□□ -1.14
NPM3-204ENST00000474993 MUC12Q9UKN1 5478 aa7.93□□□□□ -1.14
NPM3-204ENST00000474993 PRO0628Q9UI54 55 aa7.91□□□□□ -1.14
NPM3-204ENST00000474993 PMAIP1Q13794 54 aa7.88□□□□□ -1.15
NPM3-204ENST00000474993 KRTAP20-1Q3LI63 56 aa7.88□□□□□ -1.15
NPM3-204ENST00000474993 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
NPM3-204ENST00000474993 KRTAP5-9P26371 169 aa7.8□□□□□ -1.16
NPM3-204ENST00000474993 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
NPM3-204ENST00000474993 KMT2DO14686 5537 aa7.78□□□□□ -1.16
NPM3-204ENST00000474993 SPRR2FQ96RM1 72 aa7.75□□□□□ -1.17
NPM3-204ENST00000474993 PP632Q6XCG6 107 aa7.71□□□□□ -1.18
NPM3-204ENST00000474993 KRTAP19-5Q3LI72 72 aa7.64□□□□□ -1.19
NPM3-204ENST00000474993 KRTAP19-7Q3SYF9 63 aa7.63□□□□□ -1.19
NPM3-204ENST00000474993 H3BS24 57 aa7.61□□□□□ -1.19
NPM3-204ENST00000474993 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
NPM3-204ENST00000474993 MT1EP04732 61 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms