RNA–Protein interactions for RNA: ENST00000474888.1

SNRPCP3-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 3, humanhuman

BASIC

Gene SNRPCP3, Length 476 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP3-201ENST00000474888 EPPK1P58107 5090 aaKnown RBP2.58□□□□□ -2
SNRPCP3-201ENST00000474888 DNAH17Q9UFH2 4485 aa2.58□□□□□ -2
SNRPCP3-201ENST00000474888 KRTAP10-2P60368 255 aa2.58□□□□□ -2
SNRPCP3-201ENST00000474888 KRTAP4-8Q9BYQ9 185 aa2.58□□□□□ -2
SNRPCP3-201ENST00000474888 DMBT1Q9UGM3 2413 aaPredicted RBP2.58□□□□□ -2
SNRPCP3-201ENST00000474888 LORP23490 312 aaPredicted RBP2.57□□□□□ -2
SNRPCP3-201ENST00000474888 DNAH10Q8IVF4 4471 aa2.56□□□□□ -2
SNRPCP3-201ENST00000474888 A0A1B0GVY2 172 aa2.55□□□□□ -2
SNRPCP3-201ENST00000474888 NSD1Q96L73 2696 aaPredicted RBP2.55□□□□□ -2
SNRPCP3-201ENST00000474888 MYCBP2O75592 4640 aa2.55□□□□□ -2
SNRPCP3-201ENST00000474888 MGAM2Q2M2H8 2515 aa2.54□□□□□ -2
SNRPCP3-201ENST00000474888 DNAH11Q96DT5 4516 aa2.54□□□□□ -2
SNRPCP3-201ENST00000474888 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
SNRPCP3-201ENST00000474888 DNAH9Q9NYC9 4486 aa2.54□□□□□ -2
SNRPCP3-201ENST00000474888 CMYA5Q8N3K9 4069 aa2.54□□□□□ -2
SNRPCP3-201ENST00000474888 KRTAP10-1P60331 282 aa2.52□□□□□ -2.01
SNRPCP3-201ENST00000474888 PRKDCP78527 4128 aaKnown RBP2.52□□□□□ -2.01
SNRPCP3-201ENST00000474888 COL7A1Q02388 2944 aa2.52□□□□□ -2.01
SNRPCP3-201ENST00000474888 PCLOQ9Y6V0 5065 aa2.51□□□□□ -2.01
SNRPCP3-201ENST00000474888 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.51□□□□□ -2.01
SNRPCP3-201ENST00000474888 KRTAP9-2Q9BYQ4 174 aa2.51□□□□□ -2.01
SNRPCP3-201ENST00000474888 DNAH6Q9C0G6 4158 aa2.51□□□□□ -2.01
SNRPCP3-201ENST00000474888 LYSTQ99698 3801 aa2.5□□□□□ -2.01
SNRPCP3-201ENST00000474888 DNAH7Q8WXX0 4024 aa2.49□□□□□ -2.01
SNRPCP3-201ENST00000474888 STAB2Q8WWQ8 2551 aa2.49□□□□□ -2.01
SNRPCP3-201ENST00000474888 KRTAP9-6A0A140TA67 174 aa2.49□□□□□ -2.01
SNRPCP3-201ENST00000474888 HUWE1Q7Z6Z7 4374 aaKnown RBP2.49□□□□□ -2.01
SNRPCP3-201ENST00000474888 RYR1P21817 5038 aa2.48□□□□□ -2.01
SNRPCP3-201ENST00000474888 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
SNRPCP3-201ENST00000474888 LCE3BQ5TA77 95 aa2.48□□□□□ -2.01
SNRPCP3-201ENST00000474888 RYR2Q92736 4967 aa2.48□□□□□ -2.01
SNRPCP3-201ENST00000474888 DNAH2Q9P225 4427 aa2.46□□□□□ -2.02
SNRPCP3-201ENST00000474888 ZANQ9Y493 2812 aa2.46□□□□□ -2.02
SNRPCP3-201ENST00000474888 KRTAP10-10P60014 251 aa2.45□□□□□ -2.02
SNRPCP3-201ENST00000474888 SACSQ9NZJ4 4579 aa2.45□□□□□ -2.02
SNRPCP3-201ENST00000474888 KRTAP4-8A0A0G2JLE6 195 aa2.44□□□□□ -2.02
SNRPCP3-201ENST00000474888 HERC2O95714 4834 aa2.43□□□□□ -2.02
SNRPCP3-201ENST00000474888 TENM3Q9P273 2699 aa2.41□□□□□ -2.02
SNRPCP3-201ENST00000474888 TENM1Q9UKZ4 2725 aa2.4□□□□□ -2.03
SNRPCP3-201ENST00000474888 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
SNRPCP3-201ENST00000474888 KRTAP4-7Q9BYR0 210 aa2.38□□□□□ -2.03
SNRPCP3-201ENST00000474888 HECTD4Q9Y4D8 3996 aa2.38□□□□□ -2.03
SNRPCP3-201ENST00000474888 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
SNRPCP3-201ENST00000474888 KRTAP9-4Q9BYQ2 154 aa2.37□□□□□ -2.03
SNRPCP3-201ENST00000474888 APOBP04114 4563 aaKnown RBP2.35□□□□□ -2.03
SNRPCP3-201ENST00000474888 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
SNRPCP3-201ENST00000474888 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
SNRPCP3-201ENST00000474888 PKHD1L1Q86WI1 4243 aa2.32□□□□□ -2.04
SNRPCP3-201ENST00000474888 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
SNRPCP3-201ENST00000474888 LRP1Q07954 4544 aaKnown RBP2.31□□□□□ -2.04
SNRPCP3-201ENST00000474888 PKD1P98161 4303 aa2.31□□□□□ -2.04
SNRPCP3-201ENST00000474888 KIAA1109Q2LD37 5005 aa2.3□□□□□ -2.04
SNRPCP3-201ENST00000474888 LCE1DQ5T752 114 aa2.3□□□□□ -2.04
SNRPCP3-201ENST00000474888 KRTAP10-12P60413 245 aa2.29□□□□□ -2.04
SNRPCP3-201ENST00000474888 LCE3AQ5TA76 89 aa2.29□□□□□ -2.04
SNRPCP3-201ENST00000474888 ABCA13Q86UQ4 5058 aa2.29□□□□□ -2.04
SNRPCP3-201ENST00000474888 SMR3BP02814 79 aaPredicted RBP2.27□□□□□ -2.05
SNRPCP3-201ENST00000474888 KRTAP4-5Q9BYR2 181 aa2.26□□□□□ -2.05
SNRPCP3-201ENST00000474888 HERC1Q15751 4861 aa2.25□□□□□ -2.05
SNRPCP3-201ENST00000474888 KRTAP4-9Q9BYQ8 210 aa2.25□□□□□ -2.05
SNRPCP3-201ENST00000474888 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
SNRPCP3-201ENST00000474888 PKHD1P08F94 4074 aa2.25□□□□□ -2.05
SNRPCP3-201ENST00000474888 LRP1BQ9NZR2 4599 aa2.25□□□□□ -2.05
SNRPCP3-201ENST00000474888 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
SNRPCP3-201ENST00000474888 KRTAP9-8Q9BYQ0 159 aa2.24□□□□□ -2.05
SNRPCP3-201ENST00000474888 FAT2Q9NYQ8 4349 aa2.23□□□□□ -2.05
SNRPCP3-201ENST00000474888 PLECQ15149 4684 aaKnown RBP2.23□□□□□ -2.05
SNRPCP3-201ENST00000474888 TNXBP22105 4242 aa2.22□□□□□ -2.05
SNRPCP3-201ENST00000474888 STARD9Q9P2P6 4700 aa2.22□□□□□ -2.05
SNRPCP3-201ENST00000474888 DNAH5Q8TE73 4624 aa2.22□□□□□ -2.05
SNRPCP3-201ENST00000474888 HSPG2P98160 4391 aa2.22□□□□□ -2.05
SNRPCP3-201ENST00000474888 DYNC1H1Q14204 4646 aaKnown RBP2.21□□□□□ -2.06
SNRPCP3-201ENST00000474888 VPS13BQ7Z7G8 4022 aa2.21□□□□□ -2.06
SNRPCP3-201ENST00000474888 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
SNRPCP3-201ENST00000474888 KRTAP12-3P60328 96 aa2.2□□□□□ -2.06
SNRPCP3-201ENST00000474888 KRTAP19-1Q8IUB9 90 aa2.2□□□□□ -2.06
SNRPCP3-201ENST00000474888 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
SNRPCP3-201ENST00000474888 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
SNRPCP3-201ENST00000474888 KRTAP10-5P60370 271 aa2.19□□□□□ -2.06
SNRPCP3-201ENST00000474888 FAT3Q8TDW7 4589 aa2.18□□□□□ -2.06
SNRPCP3-201ENST00000474888 FLGP20930 4061 aaPredicted RBP2.17□□□□□ -2.06
SNRPCP3-201ENST00000474888 M0R2T5 61 aa2.15□□□□□ -2.07
SNRPCP3-201ENST00000474888 KRTAP2-2Q9BYT5 123 aa2.14□□□□□ -2.07
SNRPCP3-201ENST00000474888 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
SNRPCP3-201ENST00000474888 SPRR2GQ9BYE4 73 aa2.12□□□□□ -2.07
SNRPCP3-201ENST00000474888 KRTAP4-11Q9BYQ6 195 aa2.12□□□□□ -2.07
SNRPCP3-201ENST00000474888 MUC2Q02817 5179 aa2.11□□□□□ -2.07
SNRPCP3-201ENST00000474888 FAT1Q14517 4588 aa2.1□□□□□ -2.07
SNRPCP3-201ENST00000474888 KRTAP19-4Q3LI73 84 aa2.09□□□□□ -2.07
SNRPCP3-201ENST00000474888 KRTAP10-7P60409 375 aaPredicted RBP2.08□□□□□ -2.08
SNRPCP3-201ENST00000474888 KRTAP19-2Q3LHN2 52 aa2.08□□□□□ -2.08
SNRPCP3-201ENST00000474888 MT1HL1P0DM35 61 aa2.05□□□□□ -2.08
SNRPCP3-201ENST00000474888 RNF213Q63HN8 5207 aa2.05□□□□□ -2.08
SNRPCP3-201ENST00000474888 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
SNRPCP3-201ENST00000474888 KRTAP9-7A8MTY7 169 aa2.03□□□□□ -2.08
SNRPCP3-201ENST00000474888 FAT4Q6V0I7 4981 aa2.02□□□□□ -2.09
SNRPCP3-201ENST00000474888 FSIP2Q5CZC0 6907 aa2.02□□□□□ -2.09
SNRPCP3-201ENST00000474888 HMCN2Q8NDA2 5059 aa2.01□□□□□ -2.09
SNRPCP3-201ENST00000474888 KRTAP12-4P60329 112 aa2□□□□□ -2.09
SNRPCP3-201ENST00000474888 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms