RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 RPS29P62273 56 aaKnown RBP2.2□□□□□ -2.06
USP16-205ENST00000474835 KRTAP13-2Q52LG2 175 aa2.2□□□□□ -2.06
USP16-205ENST00000474835 SMR3AQ99954 134 aa2.19□□□□□ -2.06
USP16-205ENST00000474835 APLNQ9ULZ1 77 aa2.19□□□□□ -2.06
USP16-205ENST00000474835 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
USP16-205ENST00000474835 LPAP08519 4548 aa2.18□□□□□ -2.06
USP16-205ENST00000474835 A0A1B0GU69 56 aa2.18□□□□□ -2.06
USP16-205ENST00000474835 TYMSOSQ8TAI1 123 aa2.18□□□□□ -2.06
USP16-205ENST00000474835 C1orf134Q5TEV5 83 aa2.17□□□□□ -2.06
USP16-205ENST00000474835 C20orf166-AS1Q96NR2 134 aa2.17□□□□□ -2.06
USP16-205ENST00000474835 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
USP16-205ENST00000474835 H1FX-AS1Q4G0G2 97 aa2.16□□□□□ -2.06
USP16-205ENST00000474835 MGAM2Q2M2H8 2515 aa2.15□□□□□ -2.06
USP16-205ENST00000474835 KRTAP10-4P60372 401 aaPredicted RBP2.15□□□□□ -2.07
USP16-205ENST00000474835 SSBP3-AS1Q7Z2R9 100 aa2.15□□□□□ -2.07
USP16-205ENST00000474835 KRTAP4-11Q9BYQ6 195 aa2.14□□□□□ -2.07
USP16-205ENST00000474835 CRIPTQ9P021 101 aa2.14□□□□□ -2.07
USP16-205ENST00000474835 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
USP16-205ENST00000474835 PSORS1C2Q9UIG4 136 aa2.14□□□□□ -2.07
USP16-205ENST00000474835 ZNF706Q9Y5V0 76 aaPredicted RBP2.13□□□□□ -2.07
USP16-205ENST00000474835 COX6B2Q6YFQ2 88 aa2.13□□□□□ -2.07
USP16-205ENST00000474835 DMBT1Q9UGM3 2413 aaPredicted RBP2.13□□□□□ -2.07
USP16-205ENST00000474835 KRTAP4-5Q9BYR2 181 aa2.12□□□□□ -2.07
USP16-205ENST00000474835 CDK2AP2O75956 126 aa2.12□□□□□ -2.07
USP16-205ENST00000474835 C14orf177Q52M58 125 aa2.12□□□□□ -2.07
USP16-205ENST00000474835 NUPR2A6NF83 97 aa2.11□□□□□ -2.07
USP16-205ENST00000474835 KRTAP24-1Q3LI83 254 aa2.09□□□□□ -2.07
USP16-205ENST00000474835 NBDYA0A0U1RRE5 68 aa2.07□□□□□ -2.08
USP16-205ENST00000474835 IGLV9-49A0A0B4J1Y8 123 aa2.06□□□□□ -2.08
USP16-205ENST00000474835 A0A1B0GU33 70 aa2.06□□□□□ -2.08
USP16-205ENST00000474835 KRTAP12-1P59990 96 aa2.06□□□□□ -2.08
USP16-205ENST00000474835 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
USP16-205ENST00000474835 LCE5AQ5TCM9 118 aa2.05□□□□□ -2.08
USP16-205ENST00000474835 HERC1Q15751 4861 aa2.05□□□□□ -2.08
USP16-205ENST00000474835 KRTAP19-4Q3LI73 84 aa2.05□□□□□ -2.08
USP16-205ENST00000474835 RYR1P21817 5038 aa2.05□□□□□ -2.08
USP16-205ENST00000474835 KRTAP12-2P59991 146 aa2.04□□□□□ -2.08
USP16-205ENST00000474835 SEC61BP60468 96 aaKnown RBP2.04□□□□□ -2.08
USP16-205ENST00000474835 RYR2Q92736 4967 aa2.04□□□□□ -2.08
USP16-205ENST00000474835 KRTAP9-7A8MTY7 169 aa2.04□□□□□ -2.08
USP16-205ENST00000474835 LCE4AQ5TA78 99 aa2.04□□□□□ -2.08
USP16-205ENST00000474835 RYR3Q15413 4870 aa2.04□□□□□ -2.08
USP16-205ENST00000474835 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
USP16-205ENST00000474835 SPINK6Q6UWN8 80 aa2.03□□□□□ -2.08
USP16-205ENST00000474835 KMT2CQ8NEZ4 4911 aaKnown RBP2.01□□□□□ -2.09
USP16-205ENST00000474835 KRTAP9-3Q9BYQ3 159 aa2.01□□□□□ -2.09
USP16-205ENST00000474835 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
USP16-205ENST00000474835 SPINK1P00995 79 aa2□□□□□ -2.09
USP16-205ENST00000474835 RPL37P61927 97 aaKnown RBP1.99□□□□□ -2.09
USP16-205ENST00000474835 Q8N1X5 172 aa1.99□□□□□ -2.09
USP16-205ENST00000474835 MUC2Q02817 5179 aa1.99□□□□□ -2.09
USP16-205ENST00000474835 BIRC6Q9NR09 4857 aa1.99□□□□□ -2.09
USP16-205ENST00000474835 KRTAP23-1A1A580 65 aa1.99□□□□□ -2.09
USP16-205ENST00000474835 S4R3F8 94 aa1.99□□□□□ -2.09
USP16-205ENST00000474835 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
USP16-205ENST00000474835 KRTAP10-8P60410 259 aa1.98□□□□□ -2.09
USP16-205ENST00000474835 KRTAP9-8Q9BYQ0 159 aa1.98□□□□□ -2.09
USP16-205ENST00000474835 CIRBP-AS1Q8TBR5 109 aa1.97□□□□□ -2.09
USP16-205ENST00000474835 LRP2P98164 4655 aa1.97□□□□□ -2.09
USP16-205ENST00000474835 PCLOQ9Y6V0 5065 aa1.96□□□□□ -2.1
USP16-205ENST00000474835 ABCA13Q86UQ4 5058 aa1.96□□□□□ -2.1
USP16-205ENST00000474835 NDUFAF8A1L188 74 aa1.96□□□□□ -2.1
USP16-205ENST00000474835 KRTAP10-2P60368 255 aa1.96□□□□□ -2.1
USP16-205ENST00000474835 HERC2O95714 4834 aa1.95□□□□□ -2.1
USP16-205ENST00000474835 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
USP16-205ENST00000474835 KRTAP10-1P60331 282 aa1.93□□□□□ -2.1
USP16-205ENST00000474835 A0A1B0GVY2 172 aa1.92□□□□□ -2.1
USP16-205ENST00000474835 EPPK1P58107 5090 aaKnown RBP1.91□□□□□ -2.1
USP16-205ENST00000474835 J3QKU1 62 aa1.9□□□□□ -2.11
USP16-205ENST00000474835 M0QZ58 72 aa1.88□□□□□ -2.11
USP16-205ENST00000474835 A0A0D9SG42 100 aa1.87□□□□□ -2.11
USP16-205ENST00000474835 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
USP16-205ENST00000474835 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
USP16-205ENST00000474835 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
USP16-205ENST00000474835 PLAC4Q8WY50 150 aa1.84□□□□□ -2.11
USP16-205ENST00000474835 FAT4Q6V0I7 4981 aa1.83□□□□□ -2.12
USP16-205ENST00000474835 SPINT4Q6UDR6 99 aa1.83□□□□□ -2.12
USP16-205ENST00000474835 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
USP16-205ENST00000474835 MT1HL1P0DM35 61 aa1.81□□□□□ -2.12
USP16-205ENST00000474835 UBE2DNLQ8IWF7 75 aa1.8□□□□□ -2.12
USP16-205ENST00000474835 K7ERS5 55 aa1.8□□□□□ -2.12
USP16-205ENST00000474835 PRO2289Q9P1D8 64 aa1.8□□□□□ -2.12
USP16-205ENST00000474835 KIAA1109Q2LD37 5005 aa1.8□□□□□ -2.12
USP16-205ENST00000474835 LUZP6Q538Z0 58 aa1.78□□□□□ -2.13
USP16-205ENST00000474835 KRTAP10-12P60413 245 aa1.77□□□□□ -2.13
USP16-205ENST00000474835 SMR3BP02814 79 aaPredicted RBP1.75□□□□□ -2.13
USP16-205ENST00000474835 INE1O15225 51 aa1.75□□□□□ -2.13
USP16-205ENST00000474835 UBR4Q5T4S7 5183 aa1.75□□□□□ -2.13
USP16-205ENST00000474835 KRTAP4-1Q9BYQ7 146 aa1.74□□□□□ -2.13
USP16-205ENST00000474835 RNF213Q63HN8 5207 aa1.73□□□□□ -2.13
USP16-205ENST00000474835 KRTAP10-5P60370 271 aa1.72□□□□□ -2.13
USP16-205ENST00000474835 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
USP16-205ENST00000474835 SPRR2GQ9BYE4 73 aa1.72□□□□□ -2.13
USP16-205ENST00000474835 KMT2DO14686 5537 aa1.71□□□□□ -2.14
USP16-205ENST00000474835 Q5VSD8 79 aa1.71□□□□□ -2.14
USP16-205ENST00000474835 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
USP16-205ENST00000474835 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
USP16-205ENST00000474835 KRTAP2-1Q9BYU5 128 aa1.68□□□□□ -2.14
USP16-205ENST00000474835 KRTAP10-10P60014 251 aa1.68□□□□□ -2.14
USP16-205ENST00000474835 CAMK2N1Q7Z7J9 78 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms