RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
CTDSP1-207ENST00000473420 KRTAP10-10P60014 251 aa8.96□□□□□ -0.98
CTDSP1-207ENST00000473420 SNURFQ9Y675 71 aa8.96□□□□□ -0.98
CTDSP1-207ENST00000473420 C20orf197Q8N268 126 aa8.95□□□□□ -0.98
CTDSP1-207ENST00000473420 NDUFC1O43677 76 aa8.91□□□□□ -0.98
CTDSP1-207ENST00000473420 COX7CP15954 63 aa8.91□□□□□ -0.98
CTDSP1-207ENST00000473420 KRTAP9-3Q9BYQ3 159 aa8.86□□□□□ -0.99
CTDSP1-207ENST00000473420 SPANXA2-OT1Q8N9U9 137 aa8.85□□□□□ -0.99
CTDSP1-207ENST00000473420 ACYP2P14621 99 aa8.83□□□□□ -1
CTDSP1-207ENST00000473420 ANAPC13Q9BS18 74 aa8.81□□□□□ -1
CTDSP1-207ENST00000473420 H0YAA0 97 aa8.76□□□□□ -1.01
CTDSP1-207ENST00000473420 LCE2BO14633 110 aa8.71□□□□□ -1.02
CTDSP1-207ENST00000473420 H7BZZ5 65 aa8.67□□□□□ -1.02
CTDSP1-207ENST00000473420 SPTSSBQ8NFR3 76 aa8.66□□□□□ -1.02
CTDSP1-207ENST00000473420 CYSTM1Q9H1C7 97 aa8.66□□□□□ -1.02
CTDSP1-207ENST00000473420 CHKB-CPT1BH3BT56 60 aa8.65□□□□□ -1.02
CTDSP1-207ENST00000473420 CRCT1Q9UGL9 99 aa8.65□□□□□ -1.02
CTDSP1-207ENST00000473420 KRTAP9-6A0A140TA67 174 aa8.63□□□□□ -1.03
CTDSP1-207ENST00000473420 CRIPTQ9P021 101 aa8.62□□□□□ -1.03
CTDSP1-207ENST00000473420 ADM2Q7Z4H4 148 aa8.61□□□□□ -1.03
CTDSP1-207ENST00000473420 KRTAP19-1Q8IUB9 90 aa8.6□□□□□ -1.03
CTDSP1-207ENST00000473420 USH2AO75445 5202 aa8.6□□□□□ -1.03
CTDSP1-207ENST00000473420 CCDC179H3BU77 68 aa8.59□□□□□ -1.03
CTDSP1-207ENST00000473420 SPRR2GQ9BYE4 73 aa8.58□□□□□ -1.04
CTDSP1-207ENST00000473420 FSIP2Q5CZC0 6907 aa8.55□□□□□ -1.04
CTDSP1-207ENST00000473420 COA5Q86WW8 74 aa8.53□□□□□ -1.04
CTDSP1-207ENST00000473420 P0C880 135 aa8.47□□□□□ -1.05
CTDSP1-207ENST00000473420 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.06
CTDSP1-207ENST00000473420 SSPOA2VEC9 5147 aa8.45□□□□□ -1.06
CTDSP1-207ENST00000473420 ATP5EP56381 51 aaPredicted RBP8.43□□□□□ -1.06
CTDSP1-207ENST00000473420 Q5VV11 94 aa8.41□□□□□ -1.06
CTDSP1-207ENST00000473420 R4GN34 69 aa8.39□□□□□ -1.07
CTDSP1-207ENST00000473420 MT1BP07438 61 aa8.37□□□□□ -1.07
CTDSP1-207ENST00000473420 KRTAP19-6Q3LI70 58 aa8.37□□□□□ -1.07
CTDSP1-207ENST00000473420 TMEM258P61165 79 aa8.35□□□□□ -1.07
CTDSP1-207ENST00000473420 M0QZ58 72 aa8.32□□□□□ -1.08
CTDSP1-207ENST00000473420 SEC61GP60059 68 aa8.24□□□□□ -1.09
CTDSP1-207ENST00000473420 SERP1Q9Y6X1 66 aa8.21□□□□□ -1.1
CTDSP1-207ENST00000473420 FCGBPQ9Y6R7 5405 aaPredicted RBP8.19□□□□□ -1.1
CTDSP1-207ENST00000473420 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
CTDSP1-207ENST00000473420 PLAC4Q8WY50 150 aa8.14□□□□□ -1.11
CTDSP1-207ENST00000473420 A6NN06 94 aa8.12□□□□□ -1.11
CTDSP1-207ENST00000473420 KRTAP10-5P60370 271 aa8.11□□□□□ -1.11
CTDSP1-207ENST00000473420 A0A1B0GU69 56 aa8.1□□□□□ -1.11
CTDSP1-207ENST00000473420 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
CTDSP1-207ENST00000473420 PCP4P48539 62 aa8.06□□□□□ -1.12
CTDSP1-207ENST00000473420 A0A1B0GU33 70 aa8.05□□□□□ -1.12
CTDSP1-207ENST00000473420 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.03□□□□□ -1.12
CTDSP1-207ENST00000473420 LINC01558Q9Y6Z2 57 aa8.02□□□□□ -1.13
CTDSP1-207ENST00000473420 PRR15LQ9BU68 103 aa8□□□□□ -1.13
CTDSP1-207ENST00000473420 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
CTDSP1-207ENST00000473420 MT1XP80297 61 aa7.96□□□□□ -1.14
CTDSP1-207ENST00000473420 SPATA8Q6RVD6 105 aa7.94□□□□□ -1.14
CTDSP1-207ENST00000473420 A0A0D9SG42 100 aa7.86□□□□□ -1.15
CTDSP1-207ENST00000473420 SMIM26A0A096LP01 95 aa7.84□□□□□ -1.15
CTDSP1-207ENST00000473420 V9GYY9 64 aa7.83□□□□□ -1.16
CTDSP1-207ENST00000473420 MACF1Q9UPN3 7388 aaKnown RBP7.82□□□□□ -1.16
CTDSP1-207ENST00000473420 KRTAP9-7A8MTY7 169 aa7.81□□□□□ -1.16
CTDSP1-207ENST00000473420 Q1T7F1 81 aa7.78□□□□□ -1.16
CTDSP1-207ENST00000473420 RPS28P62857 69 aaKnown RBP7.76□□□□□ -1.17
CTDSP1-207ENST00000473420 CAMK2N1Q7Z7J9 78 aa7.76□□□□□ -1.17
CTDSP1-207ENST00000473420 KRTAP12-1P59990 96 aa7.75□□□□□ -1.17
CTDSP1-207ENST00000473420 UQCR11O14957 56 aa7.74□□□□□ -1.17
CTDSP1-207ENST00000473420 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
CTDSP1-207ENST00000473420 A8MU10 97 aa7.72□□□□□ -1.17
CTDSP1-207ENST00000473420 KRTAP12-2P59991 146 aa7.72□□□□□ -1.17
CTDSP1-207ENST00000473420 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
CTDSP1-207ENST00000473420 PSPHP1O15172 72 aa7.65□□□□□ -1.18
CTDSP1-207ENST00000473420 SYNE2Q8WXH0 6885 aaKnown RBP7.61□□□□□ -1.19
CTDSP1-207ENST00000473420 KRTAP10-7P60409 375 aaPredicted RBP7.59□□□□□ -1.19
CTDSP1-207ENST00000473420 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
CTDSP1-207ENST00000473420 MIR22HGQ0VDD5 57 aa7.58□□□□□ -1.2
CTDSP1-207ENST00000473420 KRTAP5-9P26371 169 aa7.51□□□□□ -1.21
CTDSP1-207ENST00000473420 KRTAP8-1Q8IUC2 63 aa7.47□□□□□ -1.21
CTDSP1-207ENST00000473420 KMT2DO14686 5537 aa7.44□□□□□ -1.22
CTDSP1-207ENST00000473420 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
CTDSP1-207ENST00000473420 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
CTDSP1-207ENST00000473420 A6NED7 52 aa7.43□□□□□ -1.22
CTDSP1-207ENST00000473420 K7ERS5 55 aa7.38□□□□□ -1.23
CTDSP1-207ENST00000473420 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
CTDSP1-207ENST00000473420 SPRR2FQ96RM1 72 aa7.34□□□□□ -1.23
CTDSP1-207ENST00000473420 TNP1P09430 55 aa7.29□□□□□ -1.24
CTDSP1-207ENST00000473420 MUC12Q9UKN1 5478 aa7.26□□□□□ -1.25
CTDSP1-207ENST00000473420 CDC42SE1Q9NRR8 79 aa7.23□□□□□ -1.25
CTDSP1-207ENST00000473420 SPRR2EP22531 72 aa7.14□□□□□ -1.27
CTDSP1-207ENST00000473420 SPRR2BP35325 72 aa7.14□□□□□ -1.27
CTDSP1-207ENST00000473420 SPRR2AP35326 72 aa7.14□□□□□ -1.27
CTDSP1-207ENST00000473420 MDN1Q9NU22 5596 aa7.13□□□□□ -1.27
CTDSP1-207ENST00000473420 LCE1AQ5T7P2 110 aa7.12□□□□□ -1.27
CTDSP1-207ENST00000473420 NEBP20929 6669 aa7.12□□□□□ -1.27
CTDSP1-207ENST00000473420 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
CTDSP1-207ENST00000473420 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
CTDSP1-207ENST00000473420 LCE3AQ5TA76 89 aa7.08□□□□□ -1.28
CTDSP1-207ENST00000473420 MT1EP04732 61 aa7.03□□□□□ -1.28
CTDSP1-207ENST00000473420 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
CTDSP1-207ENST00000473420 ROMO1P60602 79 aa6.95□□□□□ -1.3
CTDSP1-207ENST00000473420 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
CTDSP1-207ENST00000473420 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
CTDSP1-207ENST00000473420 SPRR2DP22532 72 aa6.9□□□□□ -1.3
CTDSP1-207ENST00000473420 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms