RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 ATP5EP56381 51 aaPredicted RBP10.42□□□□□ -0.74
TRABD-206ENST00000472677 ACYP2P14621 99 aa10.41□□□□□ -0.74
TRABD-206ENST00000472677 KRTAP10-6P60371 365 aaPredicted RBP10.41□□□□□ -0.74
TRABD-206ENST00000472677 LORP23490 312 aaPredicted RBP10.36□□□□□ -0.75
TRABD-206ENST00000472677 S4R3F8 94 aa10.36□□□□□ -0.75
TRABD-206ENST00000472677 LCA10Q71F78 164 aa10.29□□□□□ -0.76
TRABD-206ENST00000472677 COA5Q86WW8 74 aa10.29□□□□□ -0.76
TRABD-206ENST00000472677 CHKB-CPT1BH3BT56 60 aa10.26□□□□□ -0.77
TRABD-206ENST00000472677 CSAG1Q6PB30 78 aa10.22□□□□□ -0.77
TRABD-206ENST00000472677 KRTAP9-8Q9BYQ0 159 aa10.21□□□□□ -0.78
TRABD-206ENST00000472677 KRTAP3-3Q9BYR6 98 aa10.18□□□□□ -0.78
TRABD-206ENST00000472677 SERP1Q9Y6X1 66 aa10.18□□□□□ -0.78
TRABD-206ENST00000472677 MT2AP02795 61 aa10.13□□□□□ -0.79
TRABD-206ENST00000472677 SPTSSBQ8NFR3 76 aa10.09□□□□□ -0.79
TRABD-206ENST00000472677 KRTAP10-10P60014 251 aa10.08□□□□□ -0.8
TRABD-206ENST00000472677 MT1FP04733 61 aa10.06□□□□□ -0.8
TRABD-206ENST00000472677 RPS28P62857 69 aaKnown RBP10.01□□□□□ -0.81
TRABD-206ENST00000472677 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
TRABD-206ENST00000472677 KRTAP9-2Q9BYQ4 174 aa9.96□□□□□ -0.82
TRABD-206ENST00000472677 SMIM26A0A096LP01 95 aa9.87□□□□□ -0.83
TRABD-206ENST00000472677 KRTAP9-3Q9BYQ3 159 aa9.87□□□□□ -0.83
TRABD-206ENST00000472677 H0YAA0 97 aa9.86□□□□□ -0.83
TRABD-206ENST00000472677 ADM2Q7Z4H4 148 aa9.83□□□□□ -0.84
TRABD-206ENST00000472677 LINC01558Q9Y6Z2 57 aa9.78□□□□□ -0.84
TRABD-206ENST00000472677 SEC61GP60059 68 aa9.77□□□□□ -0.84
TRABD-206ENST00000472677 A0A1B0GU69 56 aa9.75□□□□□ -0.85
TRABD-206ENST00000472677 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
TRABD-206ENST00000472677 Q1T7F1 81 aa9.74□□□□□ -0.85
TRABD-206ENST00000472677 V9GYY9 64 aa9.74□□□□□ -0.85
TRABD-206ENST00000472677 P0C880 135 aa9.71□□□□□ -0.86
TRABD-206ENST00000472677 FSIP2Q5CZC0 6907 aa9.7□□□□□ -0.86
TRABD-206ENST00000472677 LCE2BO14633 110 aa9.7□□□□□ -0.86
TRABD-206ENST00000472677 CRIPTQ9P021 101 aa9.68□□□□□ -0.86
TRABD-206ENST00000472677 PRR15LQ9BU68 103 aa9.67□□□□□ -0.86
TRABD-206ENST00000472677 KRTAP19-1Q8IUB9 90 aa9.64□□□□□ -0.87
TRABD-206ENST00000472677 PSPHP1O15172 72 aa9.62□□□□□ -0.87
TRABD-206ENST00000472677 SPRR2GQ9BYE4 73 aa9.61□□□□□ -0.87
TRABD-206ENST00000472677 USH2AO75445 5202 aa9.56□□□□□ -0.88
TRABD-206ENST00000472677 R4GN34 69 aa9.55□□□□□ -0.88
TRABD-206ENST00000472677 A0A1B0GU33 70 aa9.53□□□□□ -0.88
TRABD-206ENST00000472677 Q5VV11 94 aa9.51□□□□□ -0.89
TRABD-206ENST00000472677 CRCT1Q9UGL9 99 aa9.51□□□□□ -0.89
TRABD-206ENST00000472677 M0QZ58 72 aa9.48□□□□□ -0.89
TRABD-206ENST00000472677 KRTAP19-8Q3LI54 63 aa9.43□□□□□ -0.9
TRABD-206ENST00000472677 KRTAP9-6A0A140TA67 174 aa9.42□□□□□ -0.9
TRABD-206ENST00000472677 KRTAP13-4Q3LI77 160 aa9.42□□□□□ -0.9
TRABD-206ENST00000472677 UQCR11O14957 56 aa9.39□□□□□ -0.91
TRABD-206ENST00000472677 SPATA8Q6RVD6 105 aa9.39□□□□□ -0.91
TRABD-206ENST00000472677 MT1BP07438 61 aa9.36□□□□□ -0.91
TRABD-206ENST00000472677 LINC01554Q52M75 96 aa9.36□□□□□ -0.91
TRABD-206ENST00000472677 SSPOA2VEC9 5147 aa9.35□□□□□ -0.91
TRABD-206ENST00000472677 A6NED7 52 aa9.32□□□□□ -0.92
TRABD-206ENST00000472677 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
TRABD-206ENST00000472677 A0A0D9SG42 100 aa9.25□□□□□ -0.93
TRABD-206ENST00000472677 KRTAP19-6Q3LI70 58 aa9.25□□□□□ -0.93
TRABD-206ENST00000472677 A8MU10 97 aa9.23□□□□□ -0.93
TRABD-206ENST00000472677 PLAC4Q8WY50 150 aa9.23□□□□□ -0.93
TRABD-206ENST00000472677 A6NN06 94 aa9.1□□□□□ -0.95
TRABD-206ENST00000472677 CDC42SE1Q9NRR8 79 aa9.1□□□□□ -0.95
TRABD-206ENST00000472677 FCGBPQ9Y6R7 5405 aaPredicted RBP9.09□□□□□ -0.95
TRABD-206ENST00000472677 SPINT4Q6UDR6 99 aa9.05□□□□□ -0.96
TRABD-206ENST00000472677 KRTAP12-1P59990 96 aa9.04□□□□□ -0.96
TRABD-206ENST00000472677 KRTAP10-5P60370 271 aa9.04□□□□□ -0.96
TRABD-206ENST00000472677 BRK1Q8WUW1 75 aa9.02□□□□□ -0.97
TRABD-206ENST00000472677 KRTAP12-2P59991 146 aa9□□□□□ -0.97
TRABD-206ENST00000472677 PRO2289Q9P1D8 64 aa8.98□□□□□ -0.97
TRABD-206ENST00000472677 MT1XP80297 61 aa8.93□□□□□ -0.98
TRABD-206ENST00000472677 K7ERS5 55 aa8.91□□□□□ -0.98
TRABD-206ENST00000472677 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
TRABD-206ENST00000472677 MACF1Q9UPN3 7388 aaKnown RBP8.81□□□□□ -1
TRABD-206ENST00000472677 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.81□□□□□ -1
TRABD-206ENST00000472677 PRO0628Q9UI54 55 aa8.65□□□□□ -1.03
TRABD-206ENST00000472677 SYNE2Q8WXH0 6885 aaKnown RBP8.63□□□□□ -1.03
TRABD-206ENST00000472677 C10orf95Q9H7T3 257 aa8.57□□□□□ -1.04
TRABD-206ENST00000472677 KRTAP10-7P60409 375 aaPredicted RBP8.56□□□□□ -1.04
TRABD-206ENST00000472677 KRTAP9-7A8MTY7 169 aa8.54□□□□□ -1.04
TRABD-206ENST00000472677 PMAIP1Q13794 54 aa8.52□□□□□ -1.05
TRABD-206ENST00000472677 KRTAP10-12P60413 245 aa8.48□□□□□ -1.05
TRABD-206ENST00000472677 ROMO1P60602 79 aa8.48□□□□□ -1.05
TRABD-206ENST00000472677 KMT2DO14686 5537 aa8.45□□□□□ -1.06
TRABD-206ENST00000472677 KRTAP6-3Q3LI67 103 aa8.41□□□□□ -1.06
TRABD-206ENST00000472677 KRTAP4-8A0A0G2JLE6 195 aa8.4□□□□□ -1.07
TRABD-206ENST00000472677 KRTAP4-8Q9BYQ9 185 aa8.4□□□□□ -1.07
TRABD-206ENST00000472677 TNP1P09430 55 aa8.37□□□□□ -1.07
TRABD-206ENST00000472677 KRTAP8-1Q8IUC2 63 aa8.37□□□□□ -1.07
TRABD-206ENST00000472677 KRTAP25-1Q3LHN0 102 aa8.3□□□□□ -1.08
TRABD-206ENST00000472677 KRTAP5-9P26371 169 aa8.25□□□□□ -1.09
TRABD-206ENST00000472677 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.1
TRABD-206ENST00000472677 SVIPQ8NHG7 77 aa8.12□□□□□ -1.11
TRABD-206ENST00000472677 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
TRABD-206ENST00000472677 LCE3AQ5TA76 89 aa8.07□□□□□ -1.12
TRABD-206ENST00000472677 KTN1-AS1Q86SY8 53 aa8.05□□□□□ -1.12
TRABD-206ENST00000472677 PRAC1Q96KF2 57 aa8.01□□□□□ -1.13
TRABD-206ENST00000472677 MDN1Q9NU22 5596 aa7.99□□□□□ -1.13
TRABD-206ENST00000472677 KRTAP23-1A1A580 65 aa7.98□□□□□ -1.13
TRABD-206ENST00000472677 KRTAP19-7Q3SYF9 63 aa7.97□□□□□ -1.13
TRABD-206ENST00000472677 NEBP20929 6669 aa7.97□□□□□ -1.13
TRABD-206ENST00000472677 SPRR2EP22531 72 aa7.95□□□□□ -1.14
TRABD-206ENST00000472677 SPRR2BP35325 72 aa7.95□□□□□ -1.14
TRABD-206ENST00000472677 SPRR2AP35326 72 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 1113.4 ms