RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
SNX13-205ENST00000471744 H3BPC8 53 aa7.3□□□□□ -1.24
SNX13-205ENST00000471744 LINC00208Q96KT6 92 aa7.3□□□□□ -1.24
SNX13-205ENST00000471744 FSIP2Q5CZC0 6907 aa7.29□□□□□ -1.24
SNX13-205ENST00000471744 KRTAP3-1Q9BYR8 98 aa7.28□□□□□ -1.24
SNX13-205ENST00000471744 SMIM20Q8N5G0 67 aa7.26□□□□□ -1.25
SNX13-205ENST00000471744 MT2AP02795 61 aa7.25□□□□□ -1.25
SNX13-205ENST00000471744 FAM236AA0A1B0GUQ0 79 aa7.24□□□□□ -1.25
SNX13-205ENST00000471744 FAM236BA0A1B0GV22 79 aa7.24□□□□□ -1.25
SNX13-205ENST00000471744 S4R3F8 94 aa7.24□□□□□ -1.25
SNX13-205ENST00000471744 CRCT1Q9UGL9 99 aa7.23□□□□□ -1.25
SNX13-205ENST00000471744 LCE1DQ5T752 114 aa7.22□□□□□ -1.25
SNX13-205ENST00000471744 TRAV7A0A075B6U4 112 aa7.2□□□□□ -1.26
SNX13-205ENST00000471744 A8MUN3 132 aa7.2□□□□□ -1.26
SNX13-205ENST00000471744 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
SNX13-205ENST00000471744 MT1FP04733 61 aa7.18□□□□□ -1.26
SNX13-205ENST00000471744 KLKP1Q107X0 134 aa7.18□□□□□ -1.26
SNX13-205ENST00000471744 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
SNX13-205ENST00000471744 LCA10Q71F78 164 aa7.17□□□□□ -1.26
SNX13-205ENST00000471744 KRTAP9-3Q9BYQ3 159 aa7.09□□□□□ -1.27
SNX13-205ENST00000471744 NDUFC1O43677 76 aa7.07□□□□□ -1.28
SNX13-205ENST00000471744 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
SNX13-205ENST00000471744 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
SNX13-205ENST00000471744 DMAC1Q96GE9 116 aa7.04□□□□□ -1.28
SNX13-205ENST00000471744 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
SNX13-205ENST00000471744 SNURFQ9Y675 71 aa6.98□□□□□ -1.29
SNX13-205ENST00000471744 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
SNX13-205ENST00000471744 ACYP2P14621 99 aa6.95□□□□□ -1.3
SNX13-205ENST00000471744 H0YAA0 97 aa6.94□□□□□ -1.3
SNX13-205ENST00000471744 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
SNX13-205ENST00000471744 COX7CP15954 63 aa6.9□□□□□ -1.3
SNX13-205ENST00000471744 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
SNX13-205ENST00000471744 USH2AO75445 5202 aa6.88□□□□□ -1.31
SNX13-205ENST00000471744 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
SNX13-205ENST00000471744 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
SNX13-205ENST00000471744 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
SNX13-205ENST00000471744 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.31
SNX13-205ENST00000471744 CHKB-CPT1BH3BT56 60 aa6.82□□□□□ -1.32
SNX13-205ENST00000471744 ADM2Q7Z4H4 148 aa6.82□□□□□ -1.32
SNX13-205ENST00000471744 ANAPC13Q9BS18 74 aa6.8□□□□□ -1.32
SNX13-205ENST00000471744 KRTAP4-11Q9BYQ6 195 aa6.8□□□□□ -1.32
SNX13-205ENST00000471744 KRTAP4-2Q9BYR5 136 aa6.8□□□□□ -1.32
SNX13-205ENST00000471744 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
SNX13-205ENST00000471744 KRTAP19-6Q3LI70 58 aa6.74□□□□□ -1.33
SNX13-205ENST00000471744 Q5VV11 94 aa6.74□□□□□ -1.33
SNX13-205ENST00000471744 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
SNX13-205ENST00000471744 H7BZZ5 65 aa6.72□□□□□ -1.33
SNX13-205ENST00000471744 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
SNX13-205ENST00000471744 P0C880 135 aa6.68□□□□□ -1.34
SNX13-205ENST00000471744 MT1BP07438 61 aa6.67□□□□□ -1.34
SNX13-205ENST00000471744 COA5Q86WW8 74 aa6.67□□□□□ -1.34
SNX13-205ENST00000471744 CYSTM1Q9H1C7 97 aa6.67□□□□□ -1.34
SNX13-205ENST00000471744 R4GN34 69 aa6.67□□□□□ -1.34
SNX13-205ENST00000471744 CCDC179H3BU77 68 aa6.61□□□□□ -1.35
SNX13-205ENST00000471744 M0QZ58 72 aa6.6□□□□□ -1.35
SNX13-205ENST00000471744 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
SNX13-205ENST00000471744 A6NN06 94 aa6.54□□□□□ -1.36
SNX13-205ENST00000471744 SEC61GP60059 68 aa6.51□□□□□ -1.37
SNX13-205ENST00000471744 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
SNX13-205ENST00000471744 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
SNX13-205ENST00000471744 SERP1Q9Y6X1 66 aa6.48□□□□□ -1.37
SNX13-205ENST00000471744 MACF1Q9UPN3 7388 aaKnown RBP6.48□□□□□ -1.37
SNX13-205ENST00000471744 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
SNX13-205ENST00000471744 TMEM258P61165 79 aa6.45□□□□□ -1.38
SNX13-205ENST00000471744 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
SNX13-205ENST00000471744 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
SNX13-205ENST00000471744 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
SNX13-205ENST00000471744 A0A1B0GU69 56 aa6.35□□□□□ -1.39
SNX13-205ENST00000471744 A0A1B0GU33 70 aa6.33□□□□□ -1.4
SNX13-205ENST00000471744 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
SNX13-205ENST00000471744 MT1XP80297 61 aa6.32□□□□□ -1.4
SNX13-205ENST00000471744 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
SNX13-205ENST00000471744 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
SNX13-205ENST00000471744 LINC01558Q9Y6Z2 57 aa6.23□□□□□ -1.41
SNX13-205ENST00000471744 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
SNX13-205ENST00000471744 A0A0D9SG42 100 aa6.19□□□□□ -1.42
SNX13-205ENST00000471744 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
SNX13-205ENST00000471744 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
SNX13-205ENST00000471744 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
SNX13-205ENST00000471744 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
SNX13-205ENST00000471744 PCP4P48539 62 aa6.1□□□□□ -1.43
SNX13-205ENST00000471744 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
SNX13-205ENST00000471744 V9GYY9 64 aa6.09□□□□□ -1.43
SNX13-205ENST00000471744 KRTAP12-1P59990 96 aa6.08□□□□□ -1.44
SNX13-205ENST00000471744 UQCR11O14957 56 aa6.05□□□□□ -1.44
SNX13-205ENST00000471744 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
SNX13-205ENST00000471744 NEBP20929 6669 aa6.04□□□□□ -1.44
SNX13-205ENST00000471744 A8MU10 97 aa6.04□□□□□ -1.44
SNX13-205ENST00000471744 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
SNX13-205ENST00000471744 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
SNX13-205ENST00000471744 Q1T7F1 81 aa6.01□□□□□ -1.45
SNX13-205ENST00000471744 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
SNX13-205ENST00000471744 MDN1Q9NU22 5596 aa5.96□□□□□ -1.45
SNX13-205ENST00000471744 RPS28P62857 69 aaKnown RBP5.95□□□□□ -1.46
SNX13-205ENST00000471744 KMT2DO14686 5537 aa5.95□□□□□ -1.46
SNX13-205ENST00000471744 PSPHP1O15172 72 aa5.92□□□□□ -1.46
SNX13-205ENST00000471744 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
SNX13-205ENST00000471744 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
SNX13-205ENST00000471744 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
SNX13-205ENST00000471744 K7ERS5 55 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms