RNA–Protein interactions for RNA: ENST00000471599.5

KPNA6-204, Transcript of karyopherin subunit alpha 6, humanhuman

TSL 2

Gene KPNA6, Length 3,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA6-204ENST00000471599 KRTAP13-3Q3SY46 172 aa4.45□□□□□ -1.7
KPNA6-204ENST00000471599 SPACA4Q8TDM5 124 aa4.44□□□□□ -1.7
KPNA6-204ENST00000471599 STARD9Q9P2P6 4700 aa4.44□□□□□ -1.7
KPNA6-204ENST00000471599 FAT3Q8TDW7 4589 aa4.43□□□□□ -1.7
KPNA6-204ENST00000471599 APOBP04114 4563 aaKnown RBP4.41□□□□□ -1.7
KPNA6-204ENST00000471599 KRTAP13-1Q8IUC0 172 aa4.4□□□□□ -1.7
KPNA6-204ENST00000471599 COX6B2Q6YFQ2 88 aa4.37□□□□□ -1.71
KPNA6-204ENST00000471599 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
KPNA6-204ENST00000471599 R4GN34 69 aa4.36□□□□□ -1.71
KPNA6-204ENST00000471599 KMT2CQ8NEZ4 4911 aaKnown RBP4.34□□□□□ -1.71
KPNA6-204ENST00000471599 HYDINQ4G0P3 5121 aa4.34□□□□□ -1.72
KPNA6-204ENST00000471599 A0A1B0GVY2 172 aa4.32□□□□□ -1.72
KPNA6-204ENST00000471599 C9orf92A6NGG3 77 aa4.31□□□□□ -1.72
KPNA6-204ENST00000471599 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
KPNA6-204ENST00000471599 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
KPNA6-204ENST00000471599 MYCBP2O75592 4640 aa4.3□□□□□ -1.72
KPNA6-204ENST00000471599 LCE2DQ5TA82 110 aaPredicted RBP4.27□□□□□ -1.73
KPNA6-204ENST00000471599 RYR3Q15413 4870 aa4.23□□□□□ -1.73
KPNA6-204ENST00000471599 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
KPNA6-204ENST00000471599 S4R3F8 94 aa4.22□□□□□ -1.73
KPNA6-204ENST00000471599 KRTAP10-8P60410 259 aa4.19□□□□□ -1.74
KPNA6-204ENST00000471599 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
KPNA6-204ENST00000471599 FAT1Q14517 4588 aa4.16□□□□□ -1.74
KPNA6-204ENST00000471599 RYR1P21817 5038 aa4.16□□□□□ -1.74
KPNA6-204ENST00000471599 EPPK1P58107 5090 aaKnown RBP4.14□□□□□ -1.75
KPNA6-204ENST00000471599 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
KPNA6-204ENST00000471599 RYR2Q92736 4967 aa4.13□□□□□ -1.75
KPNA6-204ENST00000471599 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
KPNA6-204ENST00000471599 M0R2T5 61 aa4.11□□□□□ -1.75
KPNA6-204ENST00000471599 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
KPNA6-204ENST00000471599 KRTAP13-2Q52LG2 175 aa4.11□□□□□ -1.75
KPNA6-204ENST00000471599 DYNC1H1Q14204 4646 aaKnown RBP4.1□□□□□ -1.75
KPNA6-204ENST00000471599 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
KPNA6-204ENST00000471599 XP32Q5T750 250 aa4.07□□□□□ -1.76
KPNA6-204ENST00000471599 HERC2O95714 4834 aa4.06□□□□□ -1.76
KPNA6-204ENST00000471599 BIRC6Q9NR09 4857 aa4.06□□□□□ -1.76
KPNA6-204ENST00000471599 KRTAP1-4P0C5Y4 121 aa4.05□□□□□ -1.76
KPNA6-204ENST00000471599 KRTAP17-1Q9BYP8 105 aa4.05□□□□□ -1.76
KPNA6-204ENST00000471599 FLGP20930 4061 aaPredicted RBP4.03□□□□□ -1.76
KPNA6-204ENST00000471599 KRTAP3-1Q9BYR8 98 aa3.97□□□□□ -1.77
KPNA6-204ENST00000471599 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
KPNA6-204ENST00000471599 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
KPNA6-204ENST00000471599 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
KPNA6-204ENST00000471599 KRTAP10-4P60372 401 aaPredicted RBP3.92□□□□□ -1.78
KPNA6-204ENST00000471599 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
KPNA6-204ENST00000471599 ABCA13Q86UQ4 5058 aa3.92□□□□□ -1.78
KPNA6-204ENST00000471599 MUC17Q685J3 4493 aa3.92□□□□□ -1.78
KPNA6-204ENST00000471599 INE1O15225 51 aa3.91□□□□□ -1.78
KPNA6-204ENST00000471599 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
KPNA6-204ENST00000471599 HERC1Q15751 4861 aa3.87□□□□□ -1.79
KPNA6-204ENST00000471599 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
KPNA6-204ENST00000471599 LRP2P98164 4655 aa3.84□□□□□ -1.79
KPNA6-204ENST00000471599 M0QZ58 72 aa3.81□□□□□ -1.8
KPNA6-204ENST00000471599 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
KPNA6-204ENST00000471599 UBR4Q5T4S7 5183 aa3.75□□□□□ -1.81
KPNA6-204ENST00000471599 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.81
KPNA6-204ENST00000471599 LPAP08519 4548 aa3.7□□□□□ -1.82
KPNA6-204ENST00000471599 LCE2BO14633 110 aa3.66□□□□□ -1.82
KPNA6-204ENST00000471599 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
KPNA6-204ENST00000471599 MUC2Q02817 5179 aa3.6□□□□□ -1.83
KPNA6-204ENST00000471599 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
KPNA6-204ENST00000471599 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
KPNA6-204ENST00000471599 KRTAP4-1Q9BYQ7 146 aa3.56□□□□□ -1.84
KPNA6-204ENST00000471599 TNP1P09430 55 aa3.53□□□□□ -1.84
KPNA6-204ENST00000471599 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
KPNA6-204ENST00000471599 HMCN2Q8NDA2 5059 aa3.5□□□□□ -1.85
KPNA6-204ENST00000471599 LORP23490 312 aaPredicted RBP3.48□□□□□ -1.85
KPNA6-204ENST00000471599 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
KPNA6-204ENST00000471599 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
KPNA6-204ENST00000471599 LCE2CQ5TA81 110 aa3.42□□□□□ -1.86
KPNA6-204ENST00000471599 MT1HP80294 61 aa3.39□□□□□ -1.87
KPNA6-204ENST00000471599 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
KPNA6-204ENST00000471599 LCE2AQ5TA79 106 aaPredicted RBP3.27□□□□□ -1.89
KPNA6-204ENST00000471599 MT2AP02795 61 aa3.24□□□□□ -1.89
KPNA6-204ENST00000471599 MT1FP04733 61 aa3.22□□□□□ -1.89
KPNA6-204ENST00000471599 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
KPNA6-204ENST00000471599 USH2AO75445 5202 aa3.16□□□□□ -1.9
KPNA6-204ENST00000471599 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
KPNA6-204ENST00000471599 LCE3BQ5TA77 95 aa3.12□□□□□ -1.91
KPNA6-204ENST00000471599 KRTAP9-8Q9BYQ0 159 aa3.11□□□□□ -1.91
KPNA6-204ENST00000471599 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
KPNA6-204ENST00000471599 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
KPNA6-204ENST00000471599 SPRR2GQ9BYE4 73 aa3.04□□□□□ -1.92
KPNA6-204ENST00000471599 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
KPNA6-204ENST00000471599 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
KPNA6-204ENST00000471599 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
KPNA6-204ENST00000471599 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
KPNA6-204ENST00000471599 SYNE2Q8WXH0 6885 aaKnown RBP2.96□□□□□ -1.94
KPNA6-204ENST00000471599 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
KPNA6-204ENST00000471599 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
KPNA6-204ENST00000471599 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
KPNA6-204ENST00000471599 LOC100996750A0A140TA64 210 aa2.93□□□□□ -1.94
KPNA6-204ENST00000471599 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
KPNA6-204ENST00000471599 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
KPNA6-204ENST00000471599 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
KPNA6-204ENST00000471599 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
KPNA6-204ENST00000471599 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
KPNA6-204ENST00000471599 KMT2DO14686 5537 aa2.9□□□□□ -1.94
KPNA6-204ENST00000471599 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
KPNA6-204ENST00000471599 MT1BP07438 61 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms