RNA–Protein interactions for RNA: ENST00000471234.5

TNPO3-203, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-203ENST00000471234 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
TNPO3-203ENST00000471234 MT1HL1P0DM35 61 aa4.92□□□□□ -1.62
TNPO3-203ENST00000471234 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
TNPO3-203ENST00000471234 LINC01554Q52M75 96 aa4.9□□□□□ -1.62
TNPO3-203ENST00000471234 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.63
TNPO3-203ENST00000471234 DMAC1Q96GE9 116 aa4.9□□□□□ -1.63
TNPO3-203ENST00000471234 UQCR11O14957 56 aa4.89□□□□□ -1.63
TNPO3-203ENST00000471234 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
TNPO3-203ENST00000471234 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
TNPO3-203ENST00000471234 HERC2O95714 4834 aa4.84□□□□□ -1.63
TNPO3-203ENST00000471234 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.64
TNPO3-203ENST00000471234 CSAG1Q6PB30 78 aa4.83□□□□□ -1.64
TNPO3-203ENST00000471234 XP32Q5T750 250 aa4.83□□□□□ -1.64
TNPO3-203ENST00000471234 ABCA13Q86UQ4 5058 aa4.81□□□□□ -1.64
TNPO3-203ENST00000471234 A8MUU9 505 aa4.81□□□□□ -1.64
TNPO3-203ENST00000471234 C20orf166-AS1Q96NR2 134 aa4.8□□□□□ -1.64
TNPO3-203ENST00000471234 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
TNPO3-203ENST00000471234 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
TNPO3-203ENST00000471234 LRP2P98164 4655 aa4.73□□□□□ -1.65
TNPO3-203ENST00000471234 LPAP08519 4548 aa4.73□□□□□ -1.65
TNPO3-203ENST00000471234 TPRXLQ17RH7 258 aa4.71□□□□□ -1.66
TNPO3-203ENST00000471234 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
TNPO3-203ENST00000471234 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
TNPO3-203ENST00000471234 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
TNPO3-203ENST00000471234 PCLOQ9Y6V0 5065 aa4.67□□□□□ -1.66
TNPO3-203ENST00000471234 HERC1Q15751 4861 aa4.66□□□□□ -1.66
TNPO3-203ENST00000471234 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
TNPO3-203ENST00000471234 A0A1B0GU33 70 aa4.63□□□□□ -1.67
TNPO3-203ENST00000471234 H0YAA0 97 aa4.63□□□□□ -1.67
TNPO3-203ENST00000471234 K7ERS5 55 aa4.61□□□□□ -1.67
TNPO3-203ENST00000471234 CRIPTQ9P021 101 aa4.61□□□□□ -1.67
TNPO3-203ENST00000471234 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
TNPO3-203ENST00000471234 MUC2Q02817 5179 aa4.58□□□□□ -1.68
TNPO3-203ENST00000471234 ROMO1P60602 79 aa4.58□□□□□ -1.68
TNPO3-203ENST00000471234 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
TNPO3-203ENST00000471234 S4R3F8 94 aa4.57□□□□□ -1.68
TNPO3-203ENST00000471234 LORP23490 312 aaPredicted RBP4.52□□□□□ -1.69
TNPO3-203ENST00000471234 KRTAP4-1Q9BYQ7 146 aa4.52□□□□□ -1.69
TNPO3-203ENST00000471234 M0R2T5 61 aa4.5□□□□□ -1.69
TNPO3-203ENST00000471234 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
TNPO3-203ENST00000471234 SPINT4Q6UDR6 99 aa4.47□□□□□ -1.69
TNPO3-203ENST00000471234 A0A0D9SG42 100 aa4.46□□□□□ -1.7
TNPO3-203ENST00000471234 UBR4Q5T4S7 5183 aa4.45□□□□□ -1.7
TNPO3-203ENST00000471234 P0C880 135 aa4.42□□□□□ -1.7
TNPO3-203ENST00000471234 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
TNPO3-203ENST00000471234 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
TNPO3-203ENST00000471234 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
TNPO3-203ENST00000471234 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
TNPO3-203ENST00000471234 R4GN34 69 aa4.33□□□□□ -1.72
TNPO3-203ENST00000471234 KRTAP13-4Q3LI77 160 aa4.33□□□□□ -1.72
TNPO3-203ENST00000471234 M0QZ58 72 aa4.32□□□□□ -1.72
TNPO3-203ENST00000471234 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
TNPO3-203ENST00000471234 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
TNPO3-203ENST00000471234 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
TNPO3-203ENST00000471234 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
TNPO3-203ENST00000471234 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
TNPO3-203ENST00000471234 KRTAP10-10P60014 251 aa4.2□□□□□ -1.74
TNPO3-203ENST00000471234 FLGP20930 4061 aaPredicted RBP4.2□□□□□ -1.74
TNPO3-203ENST00000471234 KRTAP19-2Q3LHN2 52 aa4.18□□□□□ -1.74
TNPO3-203ENST00000471234 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
TNPO3-203ENST00000471234 MT1HP80294 61 aa4.16□□□□□ -1.74
TNPO3-203ENST00000471234 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
TNPO3-203ENST00000471234 PLAC4Q8WY50 150 aa4.03□□□□□ -1.77
TNPO3-203ENST00000471234 MT1FP04733 61 aa4.02□□□□□ -1.77
TNPO3-203ENST00000471234 MT2AP02795 61 aa4.02□□□□□ -1.77
TNPO3-203ENST00000471234 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
TNPO3-203ENST00000471234 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.77
TNPO3-203ENST00000471234 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.78
TNPO3-203ENST00000471234 USH2AO75445 5202 aa3.89□□□□□ -1.79
TNPO3-203ENST00000471234 SPRR2GQ9BYE4 73 aa3.85□□□□□ -1.79
TNPO3-203ENST00000471234 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
TNPO3-203ENST00000471234 KRTAP9-3Q9BYQ3 159 aa3.81□□□□□ -1.8
TNPO3-203ENST00000471234 TNP1P09430 55 aa3.8□□□□□ -1.8
TNPO3-203ENST00000471234 MT1BP07438 61 aa3.75□□□□□ -1.81
TNPO3-203ENST00000471234 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
TNPO3-203ENST00000471234 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.81
TNPO3-203ENST00000471234 KRTAP19-8Q3LI54 63 aa3.71□□□□□ -1.82
TNPO3-203ENST00000471234 MT1XP80297 61 aa3.65□□□□□ -1.83
TNPO3-203ENST00000471234 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
TNPO3-203ENST00000471234 KMT2DO14686 5537 aa3.62□□□□□ -1.83
TNPO3-203ENST00000471234 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
TNPO3-203ENST00000471234 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
TNPO3-203ENST00000471234 KRTAP10-12P60413 245 aa3.59□□□□□ -1.84
TNPO3-203ENST00000471234 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
TNPO3-203ENST00000471234 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
TNPO3-203ENST00000471234 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
TNPO3-203ENST00000471234 KRTAP4-8Q9BYQ9 185 aa3.54□□□□□ -1.84
TNPO3-203ENST00000471234 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
TNPO3-203ENST00000471234 KRTAP9-2Q9BYQ4 174 aa3.49□□□□□ -1.85
TNPO3-203ENST00000471234 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
TNPO3-203ENST00000471234 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
TNPO3-203ENST00000471234 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
TNPO3-203ENST00000471234 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.86
TNPO3-203ENST00000471234 INE1O15225 51 aa3.4□□□□□ -1.87
TNPO3-203ENST00000471234 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.87
TNPO3-203ENST00000471234 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
TNPO3-203ENST00000471234 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
TNPO3-203ENST00000471234 KRTAP9-6A0A140TA67 174 aa3.35□□□□□ -1.87
TNPO3-203ENST00000471234 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
TNPO3-203ENST00000471234 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms