RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 A6NED7 52 aa7.13□□□□□ -1.27
CCNL1-212ENST00000470121 LRP2P98164 4655 aa7.12□□□□□ -1.27
CCNL1-212ENST00000470121 LPAP08519 4548 aa7.12□□□□□ -1.27
CCNL1-212ENST00000470121 A8MU10 97 aa7.12□□□□□ -1.27
CCNL1-212ENST00000470121 LCA10Q71F78 164 aa7.12□□□□□ -1.27
CCNL1-212ENST00000470121 SPTSSBQ8NFR3 76 aa7.12□□□□□ -1.27
CCNL1-212ENST00000470121 CDC42SE1Q9NRR8 79 aa7.07□□□□□ -1.28
CCNL1-212ENST00000470121 SEC61GP60059 68 aa6.99□□□□□ -1.29
CCNL1-212ENST00000470121 SPATA8Q6RVD6 105 aa6.98□□□□□ -1.29
CCNL1-212ENST00000470121 UQCR11O14957 56 aa6.97□□□□□ -1.29
CCNL1-212ENST00000470121 H1FX-AS1Q4G0G2 97 aa6.97□□□□□ -1.29
CCNL1-212ENST00000470121 S4R3F8 94 aa6.96□□□□□ -1.3
CCNL1-212ENST00000470121 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
CCNL1-212ENST00000470121 MUC17Q685J3 4493 aa6.92□□□□□ -1.3
CCNL1-212ENST00000470121 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
CCNL1-212ENST00000470121 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
CCNL1-212ENST00000470121 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
CCNL1-212ENST00000470121 A0A1B0GU33 70 aa6.87□□□□□ -1.31
CCNL1-212ENST00000470121 PMAIP1Q13794 54 aa6.86□□□□□ -1.31
CCNL1-212ENST00000470121 KRTAP10-6P60371 365 aaPredicted RBP6.85□□□□□ -1.31
CCNL1-212ENST00000470121 A6NN06 94 aa6.83□□□□□ -1.32
CCNL1-212ENST00000470121 H0YAA0 97 aa6.83□□□□□ -1.32
CCNL1-212ENST00000470121 PCLOQ9Y6V0 5065 aa6.81□□□□□ -1.32
CCNL1-212ENST00000470121 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
CCNL1-212ENST00000470121 CSAG1Q6PB30 78 aa6.77□□□□□ -1.33
CCNL1-212ENST00000470121 P0C880 135 aa6.73□□□□□ -1.33
CCNL1-212ENST00000470121 HERC1Q15751 4861 aa6.72□□□□□ -1.33
CCNL1-212ENST00000470121 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.34
CCNL1-212ENST00000470121 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
CCNL1-212ENST00000470121 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
CCNL1-212ENST00000470121 KTN1-AS1Q86SY8 53 aa6.65□□□□□ -1.34
CCNL1-212ENST00000470121 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
CCNL1-212ENST00000470121 MUC2Q02817 5179 aa6.56□□□□□ -1.36
CCNL1-212ENST00000470121 M0QZ58 72 aa6.54□□□□□ -1.36
CCNL1-212ENST00000470121 A0A0D9SG42 100 aa6.53□□□□□ -1.36
CCNL1-212ENST00000470121 K7ERS5 55 aa6.5□□□□□ -1.37
CCNL1-212ENST00000470121 LCE2BO14633 110 aa6.5□□□□□ -1.37
CCNL1-212ENST00000470121 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
CCNL1-212ENST00000470121 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
CCNL1-212ENST00000470121 KRTAP12-1P59990 96 aa6.43□□□□□ -1.38
CCNL1-212ENST00000470121 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
CCNL1-212ENST00000470121 PRAC1Q96KF2 57 aa6.43□□□□□ -1.38
CCNL1-212ENST00000470121 R4GN34 69 aa6.41□□□□□ -1.38
CCNL1-212ENST00000470121 RNF213Q63HN8 5207 aa6.35□□□□□ -1.39
CCNL1-212ENST00000470121 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
CCNL1-212ENST00000470121 ROMO1P60602 79 aa6.34□□□□□ -1.39
CCNL1-212ENST00000470121 UBR4Q5T4S7 5183 aa6.31□□□□□ -1.4
CCNL1-212ENST00000470121 MT1HP80294 61 aa6.3□□□□□ -1.4
CCNL1-212ENST00000470121 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
CCNL1-212ENST00000470121 FAT4Q6V0I7 4981 aa6.28□□□□□ -1.4
CCNL1-212ENST00000470121 CRIPTQ9P021 101 aa6.26□□□□□ -1.41
CCNL1-212ENST00000470121 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
CCNL1-212ENST00000470121 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
CCNL1-212ENST00000470121 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
CCNL1-212ENST00000470121 M0R2T5 61 aa6.19□□□□□ -1.42
CCNL1-212ENST00000470121 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
CCNL1-212ENST00000470121 MT2AP02795 61 aa6.12□□□□□ -1.43
CCNL1-212ENST00000470121 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
CCNL1-212ENST00000470121 LCE2AQ5TA79 106 aaPredicted RBP6.11□□□□□ -1.43
CCNL1-212ENST00000470121 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
CCNL1-212ENST00000470121 MT1FP04733 61 aa6.1□□□□□ -1.43
CCNL1-212ENST00000470121 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
CCNL1-212ENST00000470121 KRTAP10-10P60014 251 aa6.04□□□□□ -1.44
CCNL1-212ENST00000470121 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
CCNL1-212ENST00000470121 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
CCNL1-212ENST00000470121 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
CCNL1-212ENST00000470121 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
CCNL1-212ENST00000470121 MT1BP07438 61 aa5.84□□□□□ -1.47
CCNL1-212ENST00000470121 TNP1P09430 55 aa5.79□□□□□ -1.48
CCNL1-212ENST00000470121 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
CCNL1-212ENST00000470121 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
CCNL1-212ENST00000470121 KRTAP10-5P60370 271 aa5.71□□□□□ -1.5
CCNL1-212ENST00000470121 MT1XP80297 61 aa5.71□□□□□ -1.5
CCNL1-212ENST00000470121 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
CCNL1-212ENST00000470121 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
CCNL1-212ENST00000470121 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
CCNL1-212ENST00000470121 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
CCNL1-212ENST00000470121 KRTAP8-1Q8IUC2 63 aa5.45□□□□□ -1.54
CCNL1-212ENST00000470121 USH2AO75445 5202 aa5.44□□□□□ -1.54
CCNL1-212ENST00000470121 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
CCNL1-212ENST00000470121 H3BS24 57 aa5.38□□□□□ -1.55
CCNL1-212ENST00000470121 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
CCNL1-212ENST00000470121 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
CCNL1-212ENST00000470121 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
CCNL1-212ENST00000470121 SSPOA2VEC9 5147 aa5.25□□□□□ -1.57
CCNL1-212ENST00000470121 NDUFAF8A1L188 74 aa5.23□□□□□ -1.57
CCNL1-212ENST00000470121 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
CCNL1-212ENST00000470121 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
CCNL1-212ENST00000470121 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
CCNL1-212ENST00000470121 KMT2DO14686 5537 aa5.15□□□□□ -1.59
CCNL1-212ENST00000470121 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
CCNL1-212ENST00000470121 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.1□□□□□ -1.59
CCNL1-212ENST00000470121 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
CCNL1-212ENST00000470121 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
CCNL1-212ENST00000470121 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
CCNL1-212ENST00000470121 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
CCNL1-212ENST00000470121 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
CCNL1-212ENST00000470121 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
CCNL1-212ENST00000470121 MT1EP04732 61 aa4.98□□□□□ -1.61
CCNL1-212ENST00000470121 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms