RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 ADM2Q7Z4H4 148 aa3.82□□□□□ -1.8
GAPVD1-215ENST00000470056 KRTAP10-8P60410 259 aa3.81□□□□□ -1.8
GAPVD1-215ENST00000470056 HYDINQ4G0P3 5121 aa3.81□□□□□ -1.8
GAPVD1-215ENST00000470056 A8MU10 97 aa3.81□□□□□ -1.8
GAPVD1-215ENST00000470056 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
GAPVD1-215ENST00000470056 SACSQ9NZJ4 4579 aa3.79□□□□□ -1.8
GAPVD1-215ENST00000470056 LRP1BQ9NZR2 4599 aa3.79□□□□□ -1.8
GAPVD1-215ENST00000470056 P0C880 135 aa3.77□□□□□ -1.81
GAPVD1-215ENST00000470056 FRAS1Q86XX4 4008 aa3.76□□□□□ -1.81
GAPVD1-215ENST00000470056 PKD1P98161 4303 aa3.75□□□□□ -1.81
GAPVD1-215ENST00000470056 TNP1P09430 55 aa3.72□□□□□ -1.81
GAPVD1-215ENST00000470056 RYR1P21817 5038 aa3.71□□□□□ -1.82
GAPVD1-215ENST00000470056 APOBP04114 4563 aaKnown RBP3.7□□□□□ -1.82
GAPVD1-215ENST00000470056 XP32Q5T750 250 aa3.7□□□□□ -1.82
GAPVD1-215ENST00000470056 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
GAPVD1-215ENST00000470056 H0YAA0 97 aa3.69□□□□□ -1.82
GAPVD1-215ENST00000470056 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
GAPVD1-215ENST00000470056 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
GAPVD1-215ENST00000470056 FAT1Q14517 4588 aa3.64□□□□□ -1.83
GAPVD1-215ENST00000470056 KMT2CQ8NEZ4 4911 aaKnown RBP3.63□□□□□ -1.83
GAPVD1-215ENST00000470056 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
GAPVD1-215ENST00000470056 KIAA1109Q2LD37 5005 aa3.59□□□□□ -1.83
GAPVD1-215ENST00000470056 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.83
GAPVD1-215ENST00000470056 RYR3Q15413 4870 aa3.59□□□□□ -1.84
GAPVD1-215ENST00000470056 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
GAPVD1-215ENST00000470056 KRTAP3-1Q9BYR8 98 aa3.56□□□□□ -1.84
GAPVD1-215ENST00000470056 HSPG2P98160 4391 aa3.54□□□□□ -1.84
GAPVD1-215ENST00000470056 FAT3Q8TDW7 4589 aa3.52□□□□□ -1.85
GAPVD1-215ENST00000470056 KRTAP17-1Q9BYP8 105 aa3.52□□□□□ -1.85
GAPVD1-215ENST00000470056 KRTAP4-5Q9BYR2 181 aa3.52□□□□□ -1.85
GAPVD1-215ENST00000470056 BIRC6Q9NR09 4857 aa3.51□□□□□ -1.85
GAPVD1-215ENST00000470056 EPPK1P58107 5090 aaKnown RBP3.48□□□□□ -1.85
GAPVD1-215ENST00000470056 TNXBP22105 4242 aa3.46□□□□□ -1.86
GAPVD1-215ENST00000470056 LRP1Q07954 4544 aaKnown RBP3.45□□□□□ -1.86
GAPVD1-215ENST00000470056 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
GAPVD1-215ENST00000470056 HERC2O95714 4834 aa3.43□□□□□ -1.86
GAPVD1-215ENST00000470056 KRTAP3-3Q9BYR6 98 aa3.41□□□□□ -1.86
GAPVD1-215ENST00000470056 ABCA13Q86UQ4 5058 aa3.41□□□□□ -1.86
GAPVD1-215ENST00000470056 INE1O15225 51 aa3.4□□□□□ -1.87
GAPVD1-215ENST00000470056 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
GAPVD1-215ENST00000470056 MYCBP2O75592 4640 aa3.38□□□□□ -1.87
GAPVD1-215ENST00000470056 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
GAPVD1-215ENST00000470056 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
GAPVD1-215ENST00000470056 KRTAP12-2P59991 146 aa3.35□□□□□ -1.87
GAPVD1-215ENST00000470056 KRTAP3-2Q9BYR7 98 aa3.34□□□□□ -1.87
GAPVD1-215ENST00000470056 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
GAPVD1-215ENST00000470056 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
GAPVD1-215ENST00000470056 PCLOQ9Y6V0 5065 aa3.28□□□□□ -1.88
GAPVD1-215ENST00000470056 KRTAP4-1Q9BYQ7 146 aa3.28□□□□□ -1.89
GAPVD1-215ENST00000470056 HERC1Q15751 4861 aa3.25□□□□□ -1.89
GAPVD1-215ENST00000470056 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
GAPVD1-215ENST00000470056 LRP2P98164 4655 aa3.23□□□□□ -1.89
GAPVD1-215ENST00000470056 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
GAPVD1-215ENST00000470056 HMCN2Q8NDA2 5059 aa3.2□□□□□ -1.9
GAPVD1-215ENST00000470056 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
GAPVD1-215ENST00000470056 LPAP08519 4548 aa3.15□□□□□ -1.91
GAPVD1-215ENST00000470056 MT1HP80294 61 aa3.1□□□□□ -1.91
GAPVD1-215ENST00000470056 LORP23490 312 aaPredicted RBP3.09□□□□□ -1.91
GAPVD1-215ENST00000470056 RNF213Q63HN8 5207 aa3.09□□□□□ -1.91
GAPVD1-215ENST00000470056 LCE2CQ5TA81 110 aa3.08□□□□□ -1.92
GAPVD1-215ENST00000470056 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
GAPVD1-215ENST00000470056 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
GAPVD1-215ENST00000470056 UBR4Q5T4S7 5183 aa3.02□□□□□ -1.93
GAPVD1-215ENST00000470056 MT2AP02795 61 aa3.02□□□□□ -1.93
GAPVD1-215ENST00000470056 MT1FP04733 61 aa2.97□□□□□ -1.93
GAPVD1-215ENST00000470056 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
GAPVD1-215ENST00000470056 KRTAP19-1Q8IUB9 90 aa2.95□□□□□ -1.94
GAPVD1-215ENST00000470056 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
GAPVD1-215ENST00000470056 KRTAP9-8Q9BYQ0 159 aa2.95□□□□□ -1.94
GAPVD1-215ENST00000470056 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
GAPVD1-215ENST00000470056 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
GAPVD1-215ENST00000470056 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
GAPVD1-215ENST00000470056 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
GAPVD1-215ENST00000470056 MUC2Q02817 5179 aa2.91□□□□□ -1.94
GAPVD1-215ENST00000470056 KRTAP9-3Q9BYQ3 159 aa2.86□□□□□ -1.95
GAPVD1-215ENST00000470056 CRCT1Q9UGL9 99 aa2.84□□□□□ -1.96
GAPVD1-215ENST00000470056 MT1BP07438 61 aa2.83□□□□□ -1.96
GAPVD1-215ENST00000470056 LCE2AQ5TA79 106 aaPredicted RBP2.82□□□□□ -1.96
GAPVD1-215ENST00000470056 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
GAPVD1-215ENST00000470056 MT1XP80297 61 aa2.78□□□□□ -1.96
GAPVD1-215ENST00000470056 KRTAP10-5P60370 271 aa2.77□□□□□ -1.97
GAPVD1-215ENST00000470056 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
GAPVD1-215ENST00000470056 LCE2BO14633 110 aa2.72□□□□□ -1.97
GAPVD1-215ENST00000470056 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
GAPVD1-215ENST00000470056 MT3P25713 68 aa2.68□□□□□ -1.98
GAPVD1-215ENST00000470056 USH2AO75445 5202 aa2.62□□□□□ -1.99
GAPVD1-215ENST00000470056 LCE2DQ5TA82 110 aaPredicted RBP2.61□□□□□ -1.99
GAPVD1-215ENST00000470056 KRTAP19-6Q3LI70 58 aa2.61□□□□□ -1.99
GAPVD1-215ENST00000470056 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
GAPVD1-215ENST00000470056 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -2
GAPVD1-215ENST00000470056 KRTAP4-8A0A0G2JLE6 195 aa2.49□□□□□ -2.01
GAPVD1-215ENST00000470056 KRTAP4-8Q9BYQ9 185 aa2.49□□□□□ -2.01
GAPVD1-215ENST00000470056 SSPOA2VEC9 5147 aa2.48□□□□□ -2.01
GAPVD1-215ENST00000470056 KRTAP19-7Q3SYF9 63 aa2.46□□□□□ -2.02
GAPVD1-215ENST00000470056 MT1EP04732 61 aa2.46□□□□□ -2.02
GAPVD1-215ENST00000470056 MT1LQ93083 61 aa2.43□□□□□ -2.02
GAPVD1-215ENST00000470056 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
GAPVD1-215ENST00000470056 MT1GP13640 62 aa2.4□□□□□ -2.03
GAPVD1-215ENST00000470056 KRTAP9-2Q9BYQ4 174 aa2.39□□□□□ -2.03
GAPVD1-215ENST00000470056 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms