RNA–Protein interactions for RNA: ENST00000468658.1

CACNA2D3-203, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 1 (best)

Gene CACNA2D3, Length 1,826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-203ENST00000468658 A0A1B0GVY2 172 aa3.56□□□□□ -1.84
CACNA2D3-203ENST00000468658 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
CACNA2D3-203ENST00000468658 CAMK2N1Q7Z7J9 78 aa3.55□□□□□ -1.84
CACNA2D3-203ENST00000468658 EPPK1P58107 5090 aaKnown RBP3.55□□□□□ -1.84
CACNA2D3-203ENST00000468658 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
CACNA2D3-203ENST00000468658 K7ERS5 55 aa3.54□□□□□ -1.84
CACNA2D3-203ENST00000468658 COX6B2Q6YFQ2 88 aa3.54□□□□□ -1.84
CACNA2D3-203ENST00000468658 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
CACNA2D3-203ENST00000468658 PKD1P98161 4303 aa3.54□□□□□ -1.84
CACNA2D3-203ENST00000468658 LRP1BQ9NZR2 4599 aa3.54□□□□□ -1.84
CACNA2D3-203ENST00000468658 KMT2AQ03164 3969 aa3.54□□□□□ -1.84
CACNA2D3-203ENST00000468658 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
CACNA2D3-203ENST00000468658 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
CACNA2D3-203ENST00000468658 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
CACNA2D3-203ENST00000468658 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
CACNA2D3-203ENST00000468658 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
CACNA2D3-203ENST00000468658 KRTAP10-6P60371 365 aaPredicted RBP3.47□□□□□ -1.85
CACNA2D3-203ENST00000468658 RPL37P61927 97 aaKnown RBP3.47□□□□□ -1.85
CACNA2D3-203ENST00000468658 PCLOQ9Y6V0 5065 aa3.47□□□□□ -1.85
CACNA2D3-203ENST00000468658 PKHD1L1Q86WI1 4243 aa3.47□□□□□ -1.85
CACNA2D3-203ENST00000468658 FAT2Q9NYQ8 4349 aa3.47□□□□□ -1.85
CACNA2D3-203ENST00000468658 KRTAP10-4P60372 401 aaPredicted RBP3.47□□□□□ -1.85
CACNA2D3-203ENST00000468658 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
CACNA2D3-203ENST00000468658 UBR4Q5T4S7 5183 aa3.44□□□□□ -1.86
CACNA2D3-203ENST00000468658 P0C880 135 aa3.44□□□□□ -1.86
CACNA2D3-203ENST00000468658 KRTAP13-4Q3LI77 160 aa3.42□□□□□ -1.86
CACNA2D3-203ENST00000468658 KRTAP4-5Q9BYR2 181 aa3.42□□□□□ -1.86
CACNA2D3-203ENST00000468658 TPRXLQ17RH7 258 aa3.42□□□□□ -1.86
CACNA2D3-203ENST00000468658 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
CACNA2D3-203ENST00000468658 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
CACNA2D3-203ENST00000468658 CRIPTQ9P021 101 aa3.41□□□□□ -1.86
CACNA2D3-203ENST00000468658 PKHD1P08F94 4074 aa3.41□□□□□ -1.86
CACNA2D3-203ENST00000468658 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
CACNA2D3-203ENST00000468658 HERC2O95714 4834 aa3.4□□□□□ -1.86
CACNA2D3-203ENST00000468658 RYR1P21817 5038 aa3.39□□□□□ -1.87
CACNA2D3-203ENST00000468658 KIAA1109Q2LD37 5005 aa3.38□□□□□ -1.87
CACNA2D3-203ENST00000468658 S4R3F8 94 aa3.38□□□□□ -1.87
CACNA2D3-203ENST00000468658 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
CACNA2D3-203ENST00000468658 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
CACNA2D3-203ENST00000468658 SMR3BP02814 79 aaPredicted RBP3.36□□□□□ -1.87
CACNA2D3-203ENST00000468658 Q5VSD8 79 aa3.36□□□□□ -1.87
CACNA2D3-203ENST00000468658 FLG2Q5D862 2391 aaPredicted RBP3.35□□□□□ -1.87
CACNA2D3-203ENST00000468658 DYNC1H1Q14204 4646 aaKnown RBP3.35□□□□□ -1.87
CACNA2D3-203ENST00000468658 A0A0D9SG42 100 aa3.34□□□□□ -1.87
CACNA2D3-203ENST00000468658 SPINT4Q6UDR6 99 aa3.34□□□□□ -1.87
CACNA2D3-203ENST00000468658 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
CACNA2D3-203ENST00000468658 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
CACNA2D3-203ENST00000468658 KRTAP12-1P59990 96 aa3.33□□□□□ -1.88
CACNA2D3-203ENST00000468658 KRTAP19-1Q8IUB9 90 aa3.33□□□□□ -1.88
CACNA2D3-203ENST00000468658 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
CACNA2D3-203ENST00000468658 TNXBP22105 4242 aa3.31□□□□□ -1.88
CACNA2D3-203ENST00000468658 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
CACNA2D3-203ENST00000468658 HSPG2P98160 4391 aa3.3□□□□□ -1.88
CACNA2D3-203ENST00000468658 FAT3Q8TDW7 4589 aa3.3□□□□□ -1.88
CACNA2D3-203ENST00000468658 FAT1Q14517 4588 aa3.3□□□□□ -1.88
CACNA2D3-203ENST00000468658 LRP1Q07954 4544 aaKnown RBP3.3□□□□□ -1.88
CACNA2D3-203ENST00000468658 M0QZ58 72 aa3.29□□□□□ -1.88
CACNA2D3-203ENST00000468658 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
CACNA2D3-203ENST00000468658 ABCA13Q86UQ4 5058 aa3.27□□□□□ -1.89
CACNA2D3-203ENST00000468658 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
CACNA2D3-203ENST00000468658 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
CACNA2D3-203ENST00000468658 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
CACNA2D3-203ENST00000468658 DMBT1Q9UGM3 2413 aaPredicted RBP3.22□□□□□ -1.89
CACNA2D3-203ENST00000468658 LCE4AQ5TA78 99 aa3.21□□□□□ -1.89
CACNA2D3-203ENST00000468658 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
CACNA2D3-203ENST00000468658 KRTAP9-8Q9BYQ0 159 aa3.18□□□□□ -1.9
CACNA2D3-203ENST00000468658 MT1HL1P0DM35 61 aa3.17□□□□□ -1.9
CACNA2D3-203ENST00000468658 MYCBP2O75592 4640 aa3.16□□□□□ -1.9
CACNA2D3-203ENST00000468658 HERC1Q15751 4861 aa3.15□□□□□ -1.91
CACNA2D3-203ENST00000468658 KRTAP4-9Q9BYQ8 210 aa3.14□□□□□ -1.91
CACNA2D3-203ENST00000468658 PLAC4Q8WY50 150 aa3.12□□□□□ -1.91
CACNA2D3-203ENST00000468658 R4GN34 69 aa3.1□□□□□ -1.91
CACNA2D3-203ENST00000468658 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
CACNA2D3-203ENST00000468658 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
CACNA2D3-203ENST00000468658 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
CACNA2D3-203ENST00000468658 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
CACNA2D3-203ENST00000468658 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
CACNA2D3-203ENST00000468658 KRTAP19-2Q3LHN2 52 aa3□□□□□ -1.93
CACNA2D3-203ENST00000468658 PRO2289Q9P1D8 64 aa2.99□□□□□ -1.93
CACNA2D3-203ENST00000468658 MUC2Q02817 5179 aa2.99□□□□□ -1.93
CACNA2D3-203ENST00000468658 LRP2P98164 4655 aa2.98□□□□□ -1.93
CACNA2D3-203ENST00000468658 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
CACNA2D3-203ENST00000468658 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
CACNA2D3-203ENST00000468658 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.94
CACNA2D3-203ENST00000468658 LPAP08519 4548 aa2.95□□□□□ -1.94
CACNA2D3-203ENST00000468658 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
CACNA2D3-203ENST00000468658 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
CACNA2D3-203ENST00000468658 TNP1P09430 55 aa2.91□□□□□ -1.94
CACNA2D3-203ENST00000468658 MT3P25713 68 aa2.89□□□□□ -1.95
CACNA2D3-203ENST00000468658 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
CACNA2D3-203ENST00000468658 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
CACNA2D3-203ENST00000468658 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
CACNA2D3-203ENST00000468658 INE1O15225 51 aa2.76□□□□□ -1.97
CACNA2D3-203ENST00000468658 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
CACNA2D3-203ENST00000468658 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
CACNA2D3-203ENST00000468658 FAT4Q6V0I7 4981 aa2.72□□□□□ -1.97
CACNA2D3-203ENST00000468658 MT1HP80294 61 aa2.7□□□□□ -1.98
CACNA2D3-203ENST00000468658 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
CACNA2D3-203ENST00000468658 M0R2T5 61 aa2.68□□□□□ -1.98
CACNA2D3-203ENST00000468658 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms