RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	KRTAP4-1	Q9BYQ7	146 aa		5.56	□□□□□ -1.52
MUC1-216	ENST00000467134	H1FX-AS1	Q4G0G2	97 aa		5.55	□□□□□ -1.52
MUC1-216	ENST00000467134	CHKB-CPT1B	H3BT56	60 aa		5.54	□□□□□ -1.52
MUC1-216	ENST00000467134	SPTSSB	Q8NFR3	76 aa		5.53	□□□□□ -1.52
MUC1-216	ENST00000467134		V9GYY9	64 aa		5.5	□□□□□ -1.53
MUC1-216	ENST00000467134	KRTAP19-2	Q3LHN2	52 aa		5.49	□□□□□ -1.53
MUC1-216	ENST00000467134	UBR4	Q5T4S7	5183 aa		5.48	□□□□□ -1.53
MUC1-216	ENST00000467134	LOR	P23490	312 aa	Predicted RBP	5.47	□□□□□ -1.53
MUC1-216	ENST00000467134		Q1T7F1	81 aa		5.47	□□□□□ -1.53
MUC1-216	ENST00000467134		S4R3F8	94 aa		5.47	□□□□□ -1.53
MUC1-216	ENST00000467134	LCA10	Q71F78	164 aa		5.43	□□□□□ -1.54
MUC1-216	ENST00000467134	LINC01558	Q9Y6Z2	57 aa		5.43	□□□□□ -1.54
MUC1-216	ENST00000467134	CSAG1	Q6PB30	78 aa		5.38	□□□□□ -1.55
MUC1-216	ENST00000467134	PRR15L	Q9BU68	103 aa		5.35	□□□□□ -1.55
MUC1-216	ENST00000467134		H0YAA0	97 aa		5.33	□□□□□ -1.56
MUC1-216	ENST00000467134		A0A1B0GU69	56 aa		5.32	□□□□□ -1.56
MUC1-216	ENST00000467134	SEC61G	P60059	68 aa		5.32	□□□□□ -1.56
MUC1-216	ENST00000467134	RNF213	Q63HN8	5207 aa		5.29	□□□□□ -1.56
MUC1-216	ENST00000467134		Q5VV11	94 aa		5.28	□□□□□ -1.56
MUC1-216	ENST00000467134	PSPHP1	O15172	72 aa		5.26	□□□□□ -1.57
MUC1-216	ENST00000467134	MT1H	P80294	61 aa		5.24	□□□□□ -1.57
MUC1-216	ENST00000467134	FLG	P20930	4061 aa	Predicted RBP	5.23	□□□□□ -1.57
MUC1-216	ENST00000467134	KRTAP10-6	P60371	365 aa	Predicted RBP	5.22	□□□□□ -1.57
MUC1-216	ENST00000467134	MUC2	Q02817	5179 aa		5.21	□□□□□ -1.58
MUC1-216	ENST00000467134	UQCR11	O14957	56 aa		5.18	□□□□□ -1.58
MUC1-216	ENST00000467134	ADM2	Q7Z4H4	148 aa		5.18	□□□□□ -1.58
MUC1-216	ENST00000467134		A0A1B0GU33	70 aa		5.17	□□□□□ -1.58
MUC1-216	ENST00000467134	FAT4	Q6V0I7	4981 aa		5.16	□□□□□ -1.58
MUC1-216	ENST00000467134		P0C880	135 aa		5.15	□□□□□ -1.59
MUC1-216	ENST00000467134		A6NED7	52 aa		5.14	□□□□□ -1.59
MUC1-216	ENST00000467134		M0R2T5	61 aa		5.13	□□□□□ -1.59
MUC1-216	ENST00000467134	CRIPT	Q9P021	101 aa		5.13	□□□□□ -1.59
MUC1-216	ENST00000467134		M0QZ58	72 aa		5.12	□□□□□ -1.59
MUC1-216	ENST00000467134	SPATA8	Q6RVD6	105 aa		5.12	□□□□□ -1.59
MUC1-216	ENST00000467134	CDC42SE1	Q9NRR8	79 aa		5.11	□□□□□ -1.59
MUC1-216	ENST00000467134	MIR22HG	Q0VDD5	57 aa		5.09	□□□□□ -1.59
MUC1-216	ENST00000467134	KRTAP9-8	Q9BYQ0	159 aa		5.06	□□□□□ -1.6
MUC1-216	ENST00000467134	BRK1	Q8WUW1	75 aa		5.04	□□□□□ -1.6
MUC1-216	ENST00000467134	MT2A	P02795	61 aa		5.03	□□□□□ -1.6
MUC1-216	ENST00000467134	KRTAP13-4	Q3LI77	160 aa		5.03	□□□□□ -1.6
MUC1-216	ENST00000467134		R4GN34	69 aa		5.03	□□□□□ -1.6
MUC1-216	ENST00000467134	PRO0628	Q9UI54	55 aa		4.99	□□□□□ -1.61
MUC1-216	ENST00000467134	MT1F	P04733	61 aa		4.98	□□□□□ -1.61
MUC1-216	ENST00000467134	SPRR2G	Q9BYE4	73 aa		4.98	□□□□□ -1.61
MUC1-216	ENST00000467134		A6NN06	94 aa		4.97	□□□□□ -1.61
MUC1-216	ENST00000467134	KRTAP10-10	P60014	251 aa		4.96	□□□□□ -1.62
MUC1-216	ENST00000467134	KRTAP9-6	A0A140TA67	174 aa		4.93	□□□□□ -1.62
MUC1-216	ENST00000467134		A8MU10	97 aa		4.93	□□□□□ -1.62
MUC1-216	ENST00000467134		K7ERS5	55 aa		4.91	□□□□□ -1.62
MUC1-216	ENST00000467134	KRTAP19-1	Q8IUB9	90 aa		4.91	□□□□□ -1.62
MUC1-216	ENST00000467134		A0A0D9SG42	100 aa		4.88	□□□□□ -1.63
MUC1-216	ENST00000467134	KRTAP12-1	P59990	96 aa		4.88	□□□□□ -1.63
MUC1-216	ENST00000467134	KRTAP9-3	Q9BYQ3	159 aa		4.88	□□□□□ -1.63
MUC1-216	ENST00000467134	KRTAP9-2	Q9BYQ4	174 aa		4.88	□□□□□ -1.63
MUC1-216	ENST00000467134	KRTAP19-8	Q3LI54	63 aa		4.87	□□□□□ -1.63
MUC1-216	ENST00000467134	LINC01554	Q52M75	96 aa		4.84	□□□□□ -1.63
MUC1-216	ENST00000467134	KRTAP12-2	P59991	146 aa		4.82	□□□□□ -1.64
MUC1-216	ENST00000467134	SPINT4	Q6UDR6	99 aa		4.79	□□□□□ -1.64
MUC1-216	ENST00000467134	PMAIP1	Q13794	54 aa		4.78	□□□□□ -1.64
MUC1-216	ENST00000467134		H3BS24	57 aa		4.76	□□□□□ -1.65
MUC1-216	ENST00000467134	PLAC4	Q8WY50	150 aa		4.75	□□□□□ -1.65
MUC1-216	ENST00000467134	MT1B	P07438	61 aa		4.74	□□□□□ -1.65
MUC1-216	ENST00000467134	CAMK2N1	Q7Z7J9	78 aa		4.7	□□□□□ -1.66
MUC1-216	ENST00000467134	ROMO1	P60602	79 aa		4.68	□□□□□ -1.66
MUC1-216	ENST00000467134	LOC100996750	A0A140TA64	210 aa		4.63	□□□□□ -1.67
MUC1-216	ENST00000467134	KRTAP4-6	Q9BYQ5	205 aa		4.63	□□□□□ -1.67
MUC1-216	ENST00000467134	KTN1-AS1	Q86SY8	53 aa		4.62	□□□□□ -1.67
MUC1-216	ENST00000467134	C10orf95	Q9H7T3	257 aa		4.6	□□□□□ -1.67
MUC1-216	ENST00000467134	PRO2289	Q9P1D8	64 aa		4.59	□□□□□ -1.67
MUC1-216	ENST00000467134	MT1X	P80297	61 aa		4.57	□□□□□ -1.68
MUC1-216	ENST00000467134	KRTAP25-1	Q3LHN0	102 aa		4.56	□□□□□ -1.68
MUC1-216	ENST00000467134	KRTAP10-5	P60370	271 aa		4.55	□□□□□ -1.68
MUC1-216	ENST00000467134	TNP1	P09430	55 aa		4.51	□□□□□ -1.69
MUC1-216	ENST00000467134	KRTAP19-6	Q3LI70	58 aa		4.51	□□□□□ -1.69
MUC1-216	ENST00000467134	SVIP	Q8NHG7	77 aa		4.49	□□□□□ -1.69
MUC1-216	ENST00000467134	CRCT1	Q9UGL9	99 aa		4.49	□□□□□ -1.69
MUC1-216	ENST00000467134	USH2A	O75445	5202 aa		4.48	□□□□□ -1.69
MUC1-216	ENST00000467134	KRTAP23-1	A1A580	65 aa		4.47	□□□□□ -1.69
MUC1-216	ENST00000467134	FSIP2	Q5CZC0	6907 aa		4.46	□□□□□ -1.7
MUC1-216	ENST00000467134	PP632	Q6XCG6	107 aa		4.43	□□□□□ -1.7
MUC1-216	ENST00000467134	SSPO	A2VEC9	5147 aa		4.41	□□□□□ -1.7
MUC1-216	ENST00000467134	PRAC1	Q96KF2	57 aa		4.41	□□□□□ -1.7
MUC1-216	ENST00000467134	KRTAP10-12	P60413	245 aa		4.38	□□□□□ -1.71
MUC1-216	ENST00000467134	KRTAP9-7	A8MTY7	169 aa		4.36	□□□□□ -1.71
MUC1-216	ENST00000467134	KRTAP4-8	Q9BYQ9	185 aa		4.35	□□□□□ -1.71
MUC1-216	ENST00000467134	KRTAP10-7	P60409	375 aa	Predicted RBP	4.33	□□□□□ -1.72
MUC1-216	ENST00000467134	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.28	□□□□□ -1.72
MUC1-216	ENST00000467134	LCE3A	Q5TA76	89 aa		4.27	□□□□□ -1.73
MUC1-216	ENST00000467134	KRTAP8-1	Q8IUC2	63 aa		4.27	□□□□□ -1.73
MUC1-216	ENST00000467134	KRTAP4-12	Q9BQ66	201 aa		4.27	□□□□□ -1.73
MUC1-216	ENST00000467134	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.18	□□□□□ -1.74
MUC1-216	ENST00000467134	LCE3B	Q5TA77	95 aa		4.16	□□□□□ -1.74
MUC1-216	ENST00000467134	KRTAP4-8	A0A0G2JLE6	195 aa		4.14	□□□□□ -1.75
MUC1-216	ENST00000467134	KRTAP12-3	P60328	96 aa		4.14	□□□□□ -1.75
MUC1-216	ENST00000467134	KRTAP19-4	Q3LI73	84 aa		4.14	□□□□□ -1.75
MUC1-216	ENST00000467134	KRTAP19-5	Q3LI72	72 aa		4.09	□□□□□ -1.75
MUC1-216	ENST00000467134	KRTAP9-9	Q9BYP9	154 aa		4.09	□□□□□ -1.75
MUC1-216	ENST00000467134	KRTAP9-4	Q9BYQ2	154 aa		4.09	□□□□□ -1.75
MUC1-216	ENST00000467134	KRTAP19-7	Q3SYF9	63 aa		4.08	□□□□□ -1.76
MUC1-216	ENST00000467134	LCE4A	Q5TA78	99 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms