RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 Q8N1X5 172 aa8.47□□□□□ -1.05
ABCF3-206ENST00000466742 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.05
ABCF3-206ENST00000466742 BIRC6Q9NR09 4857 aa8.45□□□□□ -1.06
ABCF3-206ENST00000466742 HSPG2P98160 4391 aa8.44□□□□□ -1.06
ABCF3-206ENST00000466742 RYR1P21817 5038 aa8.4□□□□□ -1.06
ABCF3-206ENST00000466742 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
ABCF3-206ENST00000466742 Q5VSD8 79 aa8.38□□□□□ -1.07
ABCF3-206ENST00000466742 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
ABCF3-206ENST00000466742 PKHD1L1Q86WI1 4243 aa8.34□□□□□ -1.07
ABCF3-206ENST00000466742 COX6B2Q6YFQ2 88 aa8.31□□□□□ -1.08
ABCF3-206ENST00000466742 KIAA1109Q2LD37 5005 aa8.31□□□□□ -1.08
ABCF3-206ENST00000466742 KRTAP17-1Q9BYP8 105 aa8.28□□□□□ -1.08
ABCF3-206ENST00000466742 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
ABCF3-206ENST00000466742 KRTAP3-1Q9BYR8 98 aa8.24□□□□□ -1.09
ABCF3-206ENST00000466742 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
ABCF3-206ENST00000466742 LRP1Q07954 4544 aaKnown RBP8.21□□□□□ -1.09
ABCF3-206ENST00000466742 HERC2O95714 4834 aa8.2□□□□□ -1.1
ABCF3-206ENST00000466742 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
ABCF3-206ENST00000466742 TNXBP22105 4242 aa8.18□□□□□ -1.1
ABCF3-206ENST00000466742 FAT3Q8TDW7 4589 aa8.17□□□□□ -1.1
ABCF3-206ENST00000466742 PCLOQ9Y6V0 5065 aa8.09□□□□□ -1.11
ABCF3-206ENST00000466742 MYCBP2O75592 4640 aa8.08□□□□□ -1.12
ABCF3-206ENST00000466742 MT1HL1P0DM35 61 aa8.08□□□□□ -1.12
ABCF3-206ENST00000466742 LUZP6Q538Z0 58 aa8.08□□□□□ -1.12
ABCF3-206ENST00000466742 KRTAP13-4Q3LI77 160 aa8.04□□□□□ -1.12
ABCF3-206ENST00000466742 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
ABCF3-206ENST00000466742 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
ABCF3-206ENST00000466742 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
ABCF3-206ENST00000466742 A0A0D9SG42 100 aa8.01□□□□□ -1.13
ABCF3-206ENST00000466742 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
ABCF3-206ENST00000466742 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
ABCF3-206ENST00000466742 S4R3F8 94 aa7.94□□□□□ -1.14
ABCF3-206ENST00000466742 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
ABCF3-206ENST00000466742 XP32Q5T750 250 aa7.9□□□□□ -1.14
ABCF3-206ENST00000466742 J3QL48 77 aa7.89□□□□□ -1.15
ABCF3-206ENST00000466742 KRTAP12-2P59991 146 aa7.86□□□□□ -1.15
ABCF3-206ENST00000466742 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
ABCF3-206ENST00000466742 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
ABCF3-206ENST00000466742 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
ABCF3-206ENST00000466742 HERC1Q15751 4861 aa7.73□□□□□ -1.17
ABCF3-206ENST00000466742 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
ABCF3-206ENST00000466742 LRP2P98164 4655 aa7.61□□□□□ -1.19
ABCF3-206ENST00000466742 LPAP08519 4548 aa7.61□□□□□ -1.19
ABCF3-206ENST00000466742 M0QZ58 72 aa7.51□□□□□ -1.21
ABCF3-206ENST00000466742 HMCN2Q8NDA2 5059 aa7.41□□□□□ -1.22
ABCF3-206ENST00000466742 MUC17Q685J3 4493 aa7.38□□□□□ -1.23
ABCF3-206ENST00000466742 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
ABCF3-206ENST00000466742 UBR4Q5T4S7 5183 aa7.29□□□□□ -1.24
ABCF3-206ENST00000466742 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
ABCF3-206ENST00000466742 CAMK2N1Q7Z7J9 78 aa7.26□□□□□ -1.25
ABCF3-206ENST00000466742 KRTAP19-2Q3LHN2 52 aa7.16□□□□□ -1.26
ABCF3-206ENST00000466742 MUC2Q02817 5179 aa7.14□□□□□ -1.27
ABCF3-206ENST00000466742 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
ABCF3-206ENST00000466742 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
ABCF3-206ENST00000466742 RNF213Q63HN8 5207 aa7.11□□□□□ -1.27
ABCF3-206ENST00000466742 R4GN34 69 aa7.1□□□□□ -1.27
ABCF3-206ENST00000466742 FLGP20930 4061 aaPredicted RBP6.98□□□□□ -1.29
ABCF3-206ENST00000466742 LCE2CQ5TA81 110 aa6.95□□□□□ -1.3
ABCF3-206ENST00000466742 INE1O15225 51 aa6.88□□□□□ -1.31
ABCF3-206ENST00000466742 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
ABCF3-206ENST00000466742 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
ABCF3-206ENST00000466742 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
ABCF3-206ENST00000466742 MT1HP80294 61 aa6.79□□□□□ -1.32
ABCF3-206ENST00000466742 M0R2T5 61 aa6.72□□□□□ -1.33
ABCF3-206ENST00000466742 TNP1P09430 55 aa6.7□□□□□ -1.34
ABCF3-206ENST00000466742 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
ABCF3-206ENST00000466742 MT2AP02795 61 aa6.55□□□□□ -1.36
ABCF3-206ENST00000466742 MT1FP04733 61 aa6.51□□□□□ -1.37
ABCF3-206ENST00000466742 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
ABCF3-206ENST00000466742 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
ABCF3-206ENST00000466742 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
ABCF3-206ENST00000466742 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
ABCF3-206ENST00000466742 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
ABCF3-206ENST00000466742 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
ABCF3-206ENST00000466742 KRTAP9-2Q9BYQ4 174 aa6.28□□□□□ -1.4
ABCF3-206ENST00000466742 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
ABCF3-206ENST00000466742 MT1BP07438 61 aa6.2□□□□□ -1.42
ABCF3-206ENST00000466742 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
ABCF3-206ENST00000466742 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
ABCF3-206ENST00000466742 LCE2BO14633 110 aa6.13□□□□□ -1.43
ABCF3-206ENST00000466742 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
ABCF3-206ENST00000466742 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
ABCF3-206ENST00000466742 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
ABCF3-206ENST00000466742 MT1XP80297 61 aa6.02□□□□□ -1.45
ABCF3-206ENST00000466742 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
ABCF3-206ENST00000466742 USH2AO75445 5202 aa5.95□□□□□ -1.46
ABCF3-206ENST00000466742 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
ABCF3-206ENST00000466742 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
ABCF3-206ENST00000466742 SSPOA2VEC9 5147 aa5.81□□□□□ -1.48
ABCF3-206ENST00000466742 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
ABCF3-206ENST00000466742 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
ABCF3-206ENST00000466742 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
ABCF3-206ENST00000466742 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
ABCF3-206ENST00000466742 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
ABCF3-206ENST00000466742 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
ABCF3-206ENST00000466742 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
ABCF3-206ENST00000466742 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
ABCF3-206ENST00000466742 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
ABCF3-206ENST00000466742 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
ABCF3-206ENST00000466742 KMT2DO14686 5537 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 417.5 ms