RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 MT2AP02795 61 aa4□□□□□ -1.77
SCAF11-205ENST00000465950 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
SCAF11-205ENST00000465950 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
SCAF11-205ENST00000465950 DNAH10Q8IVF4 4471 aa3.98□□□□□ -1.77
SCAF11-205ENST00000465950 SPRR2EP22531 72 aa3.93□□□□□ -1.78
SCAF11-205ENST00000465950 SPRR2BP35325 72 aa3.93□□□□□ -1.78
SCAF11-205ENST00000465950 SPRR2AP35326 72 aa3.93□□□□□ -1.78
SCAF11-205ENST00000465950 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
SCAF11-205ENST00000465950 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
SCAF11-205ENST00000465950 MYCBP2O75592 4640 aa3.92□□□□□ -1.78
SCAF11-205ENST00000465950 KRTAP17-1Q9BYP8 105 aa3.92□□□□□ -1.78
SCAF11-205ENST00000465950 HERC1Q15751 4861 aa3.91□□□□□ -1.78
SCAF11-205ENST00000465950 SRRM2Q9UQ35 2752 aaKnown RBP3.91□□□□□ -1.78
SCAF11-205ENST00000465950 NDUFAF8A1L188 74 aa3.9□□□□□ -1.78
SCAF11-205ENST00000465950 MEGF8Q7Z7M0 2845 aa3.89□□□□□ -1.79
SCAF11-205ENST00000465950 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
SCAF11-205ENST00000465950 KRTAP3-3Q9BYR6 98 aa3.86□□□□□ -1.79
SCAF11-205ENST00000465950 SPRR2DP22532 72 aa3.86□□□□□ -1.79
SCAF11-205ENST00000465950 LCE2DQ5TA82 110 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-205ENST00000465950 KRTAP4-1Q9BYQ7 146 aa3.83□□□□□ -1.8
SCAF11-205ENST00000465950 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
SCAF11-205ENST00000465950 BIRC6Q9NR09 4857 aa3.82□□□□□ -1.8
SCAF11-205ENST00000465950 PLECQ15149 4684 aaKnown RBP3.81□□□□□ -1.8
SCAF11-205ENST00000465950 LYSTQ99698 3801 aa3.81□□□□□ -1.8
SCAF11-205ENST00000465950 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
SCAF11-205ENST00000465950 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
SCAF11-205ENST00000465950 MT1FP04733 61 aa3.81□□□□□ -1.8
SCAF11-205ENST00000465950 DNAH2Q9P225 4427 aa3.8□□□□□ -1.8
SCAF11-205ENST00000465950 COL7A1Q02388 2944 aa3.79□□□□□ -1.8
SCAF11-205ENST00000465950 TRRAPQ9Y4A5 3859 aa3.79□□□□□ -1.8
SCAF11-205ENST00000465950 LCE2BO14633 110 aa3.79□□□□□ -1.8
SCAF11-205ENST00000465950 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
SCAF11-205ENST00000465950 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
SCAF11-205ENST00000465950 DNAH6Q9C0G6 4158 aa3.75□□□□□ -1.81
SCAF11-205ENST00000465950 KRTAP19-8Q3LI54 63 aa3.74□□□□□ -1.81
SCAF11-205ENST00000465950 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
SCAF11-205ENST00000465950 DYNC1H1Q14204 4646 aaKnown RBP3.74□□□□□ -1.81
SCAF11-205ENST00000465950 DNAH3Q8TD57 4116 aa3.73□□□□□ -1.81
SCAF11-205ENST00000465950 DNAH9Q9NYC9 4486 aa3.72□□□□□ -1.81
SCAF11-205ENST00000465950 DNAH5Q8TE73 4624 aa3.72□□□□□ -1.81
SCAF11-205ENST00000465950 DYNC2H1Q8NCM8 4307 aaKnown RBP3.69□□□□□ -1.82
SCAF11-205ENST00000465950 KRTAP19-1Q8IUB9 90 aa3.68□□□□□ -1.82
SCAF11-205ENST00000465950 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
SCAF11-205ENST00000465950 DNHD1Q96M86 4753 aa3.68□□□□□ -1.82
SCAF11-205ENST00000465950 RYR1P21817 5038 aa3.68□□□□□ -1.82
SCAF11-205ENST00000465950 H3BS24 57 aa3.66□□□□□ -1.82
SCAF11-205ENST00000465950 INE1O15225 51 aa3.65□□□□□ -1.82
SCAF11-205ENST00000465950 HSPG2P98160 4391 aa3.65□□□□□ -1.83
SCAF11-205ENST00000465950 CMYA5Q8N3K9 4069 aa3.65□□□□□ -1.83
SCAF11-205ENST00000465950 HERC2O95714 4834 aa3.62□□□□□ -1.83
SCAF11-205ENST00000465950 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
SCAF11-205ENST00000465950 MT1GP13640 62 aa3.58□□□□□ -1.84
SCAF11-205ENST00000465950 DNAH17Q9UFH2 4485 aa3.55□□□□□ -1.84
SCAF11-205ENST00000465950 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
SCAF11-205ENST00000465950 LRP1Q07954 4544 aaKnown RBP3.55□□□□□ -1.84
SCAF11-205ENST00000465950 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
SCAF11-205ENST00000465950 FAT2Q9NYQ8 4349 aa3.54□□□□□ -1.84
SCAF11-205ENST00000465950 RYR2Q92736 4967 aa3.53□□□□□ -1.84
SCAF11-205ENST00000465950 SACSQ9NZJ4 4579 aa3.52□□□□□ -1.85
SCAF11-205ENST00000465950 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
SCAF11-205ENST00000465950 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
SCAF11-205ENST00000465950 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
SCAF11-205ENST00000465950 RYR3Q15413 4870 aa3.51□□□□□ -1.85
SCAF11-205ENST00000465950 VPS13DQ5THJ4 4388 aa3.5□□□□□ -1.85
SCAF11-205ENST00000465950 HECTD4Q9Y4D8 3996 aa3.5□□□□□ -1.85
SCAF11-205ENST00000465950 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
SCAF11-205ENST00000465950 DNAH7Q8WXX0 4024 aa3.49□□□□□ -1.85
SCAF11-205ENST00000465950 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
SCAF11-205ENST00000465950 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
SCAF11-205ENST00000465950 KMT2CQ8NEZ4 4911 aaKnown RBP3.47□□□□□ -1.85
SCAF11-205ENST00000465950 PKHD1L1Q86WI1 4243 aa3.47□□□□□ -1.85
SCAF11-205ENST00000465950 DNAH8Q96JB1 4490 aa3.46□□□□□ -1.86
SCAF11-205ENST00000465950 FAT3Q8TDW7 4589 aa3.46□□□□□ -1.86
SCAF11-205ENST00000465950 APOBP04114 4563 aaKnown RBP3.45□□□□□ -1.86
SCAF11-205ENST00000465950 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
SCAF11-205ENST00000465950 LCE2AQ5TA79 106 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-205ENST00000465950 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
SCAF11-205ENST00000465950 FAT1Q14517 4588 aa3.42□□□□□ -1.86
SCAF11-205ENST00000465950 MT1BP07438 61 aa3.41□□□□□ -1.86
SCAF11-205ENST00000465950 PRKDCP78527 4128 aaKnown RBP3.39□□□□□ -1.87
SCAF11-205ENST00000465950 LRP2P98164 4655 aa3.39□□□□□ -1.87
SCAF11-205ENST00000465950 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
SCAF11-205ENST00000465950 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
SCAF11-205ENST00000465950 MT1XP80297 61 aa3.35□□□□□ -1.87
SCAF11-205ENST00000465950 FRAS1Q86XX4 4008 aa3.33□□□□□ -1.88
SCAF11-205ENST00000465950 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
SCAF11-205ENST00000465950 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
SCAF11-205ENST00000465950 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
SCAF11-205ENST00000465950 KIAA1109Q2LD37 5005 aa3.3□□□□□ -1.88
SCAF11-205ENST00000465950 VPS13BQ7Z7G8 4022 aa3.29□□□□□ -1.88
SCAF11-205ENST00000465950 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
SCAF11-205ENST00000465950 PKD1P98161 4303 aa3.26□□□□□ -1.89
SCAF11-205ENST00000465950 STARD9Q9P2P6 4700 aa3.26□□□□□ -1.89
SCAF11-205ENST00000465950 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
SCAF11-205ENST00000465950 KMT2AQ03164 3969 aa3.24□□□□□ -1.89
SCAF11-205ENST00000465950 MT3P25713 68 aa3.21□□□□□ -1.9
SCAF11-205ENST00000465950 EPPK1P58107 5090 aaKnown RBP3.21□□□□□ -1.9
SCAF11-205ENST00000465950 PKHD1P08F94 4074 aa3.2□□□□□ -1.9
SCAF11-205ENST00000465950 MT1LQ93083 61 aa3.2□□□□□ -1.9
SCAF11-205ENST00000465950 MT4P47944 62 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms