RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
HLA-F-223ENST00000465459 ACYP2P14621 99 aa7.02□□□□□ -1.29
HLA-F-223ENST00000465459 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
HLA-F-223ENST00000465459 H7BZZ5 65 aa6.98□□□□□ -1.29
HLA-F-223ENST00000465459 CCDC179H3BU77 68 aa6.96□□□□□ -1.3
HLA-F-223ENST00000465459 MT2AP02795 61 aa6.96□□□□□ -1.3
HLA-F-223ENST00000465459 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
HLA-F-223ENST00000465459 MT1FP04733 61 aa6.9□□□□□ -1.3
HLA-F-223ENST00000465459 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
HLA-F-223ENST00000465459 LCE2DQ5TA82 110 aaPredicted RBP6.89□□□□□ -1.31
HLA-F-223ENST00000465459 SPTSSBQ8NFR3 76 aa6.89□□□□□ -1.31
HLA-F-223ENST00000465459 H0YAA0 97 aa6.87□□□□□ -1.31
HLA-F-223ENST00000465459 CHKB-CPT1BH3BT56 60 aa6.87□□□□□ -1.31
HLA-F-223ENST00000465459 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
HLA-F-223ENST00000465459 COA5Q86WW8 74 aa6.81□□□□□ -1.32
HLA-F-223ENST00000465459 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
HLA-F-223ENST00000465459 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
HLA-F-223ENST00000465459 TMEM258P61165 79 aa6.78□□□□□ -1.32
HLA-F-223ENST00000465459 ADM2Q7Z4H4 148 aa6.74□□□□□ -1.33
HLA-F-223ENST00000465459 CRIPTQ9P021 101 aa6.74□□□□□ -1.33
HLA-F-223ENST00000465459 PCP4P48539 62 aa6.68□□□□□ -1.34
HLA-F-223ENST00000465459 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
HLA-F-223ENST00000465459 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
HLA-F-223ENST00000465459 LCE2BO14633 110 aa6.65□□□□□ -1.34
HLA-F-223ENST00000465459 P0C880 135 aa6.64□□□□□ -1.35
HLA-F-223ENST00000465459 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
HLA-F-223ENST00000465459 SEC61GP60059 68 aa6.57□□□□□ -1.36
HLA-F-223ENST00000465459 SERP1Q9Y6X1 66 aa6.57□□□□□ -1.36
HLA-F-223ENST00000465459 R4GN34 69 aa6.57□□□□□ -1.36
HLA-F-223ENST00000465459 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
HLA-F-223ENST00000465459 M0QZ58 72 aa6.51□□□□□ -1.37
HLA-F-223ENST00000465459 USH2AO75445 5202 aa6.5□□□□□ -1.37
HLA-F-223ENST00000465459 Q5VV11 94 aa6.5□□□□□ -1.37
HLA-F-223ENST00000465459 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
HLA-F-223ENST00000465459 A0A1B0GU69 56 aa6.47□□□□□ -1.37
HLA-F-223ENST00000465459 FSIP2Q5CZC0 6907 aa6.45□□□□□ -1.38
HLA-F-223ENST00000465459 MT1BP07438 61 aa6.45□□□□□ -1.38
HLA-F-223ENST00000465459 KRTAP9-6A0A140TA67 174 aa6.44□□□□□ -1.38
HLA-F-223ENST00000465459 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
HLA-F-223ENST00000465459 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
HLA-F-223ENST00000465459 A0A1B0GU33 70 aa6.41□□□□□ -1.38
HLA-F-223ENST00000465459 RPS28P62857 69 aaKnown RBP6.39□□□□□ -1.39
HLA-F-223ENST00000465459 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
HLA-F-223ENST00000465459 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
HLA-F-223ENST00000465459 SSPOA2VEC9 5147 aa6.37□□□□□ -1.39
HLA-F-223ENST00000465459 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
HLA-F-223ENST00000465459 V9GYY9 64 aa6.36□□□□□ -1.39
HLA-F-223ENST00000465459 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
HLA-F-223ENST00000465459 A6NN06 94 aa6.34□□□□□ -1.39
HLA-F-223ENST00000465459 PLAC4Q8WY50 150 aa6.34□□□□□ -1.39
HLA-F-223ENST00000465459 Q1T7F1 81 aa6.31□□□□□ -1.4
HLA-F-223ENST00000465459 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
HLA-F-223ENST00000465459 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
HLA-F-223ENST00000465459 UQCR11O14957 56 aa6.22□□□□□ -1.41
HLA-F-223ENST00000465459 FCGBPQ9Y6R7 5405 aaPredicted RBP6.2□□□□□ -1.42
HLA-F-223ENST00000465459 A0A0D9SG42 100 aa6.2□□□□□ -1.42
HLA-F-223ENST00000465459 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
HLA-F-223ENST00000465459 PSPHP1O15172 72 aa6.18□□□□□ -1.42
HLA-F-223ENST00000465459 MT1XP80297 61 aa6.15□□□□□ -1.42
HLA-F-223ENST00000465459 A8MU10 97 aa6.12□□□□□ -1.43
HLA-F-223ENST00000465459 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
HLA-F-223ENST00000465459 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
HLA-F-223ENST00000465459 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
HLA-F-223ENST00000465459 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
HLA-F-223ENST00000465459 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
HLA-F-223ENST00000465459 A6NED7 52 aa6.02□□□□□ -1.45
HLA-F-223ENST00000465459 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
HLA-F-223ENST00000465459 K7ERS5 55 aa5.93□□□□□ -1.46
HLA-F-223ENST00000465459 MACF1Q9UPN3 7388 aaKnown RBP5.92□□□□□ -1.46
HLA-F-223ENST00000465459 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
HLA-F-223ENST00000465459 CDC42SE1Q9NRR8 79 aa5.86□□□□□ -1.47
HLA-F-223ENST00000465459 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
HLA-F-223ENST00000465459 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
HLA-F-223ENST00000465459 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
HLA-F-223ENST00000465459 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
HLA-F-223ENST00000465459 TNP1P09430 55 aa5.75□□□□□ -1.49
HLA-F-223ENST00000465459 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
HLA-F-223ENST00000465459 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
HLA-F-223ENST00000465459 KRTAP4-8A0A0G2JLE6 195 aa5.71□□□□□ -1.5
HLA-F-223ENST00000465459 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
HLA-F-223ENST00000465459 KRTAP4-8Q9BYQ9 185 aa5.71□□□□□ -1.5
HLA-F-223ENST00000465459 KMT2DO14686 5537 aa5.69□□□□□ -1.5
HLA-F-223ENST00000465459 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
HLA-F-223ENST00000465459 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
HLA-F-223ENST00000465459 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
HLA-F-223ENST00000465459 ROMO1P60602 79 aa5.58□□□□□ -1.52
HLA-F-223ENST00000465459 LCE3AQ5TA76 89 aa5.53□□□□□ -1.52
HLA-F-223ENST00000465459 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
HLA-F-223ENST00000465459 KRTAP19-7Q3SYF9 63 aa5.49□□□□□ -1.53
HLA-F-223ENST00000465459 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
HLA-F-223ENST00000465459 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
HLA-F-223ENST00000465459 MT1EP04732 61 aa5.43□□□□□ -1.54
HLA-F-223ENST00000465459 SPRR2EP22531 72 aa5.42□□□□□ -1.54
HLA-F-223ENST00000465459 SPRR2BP35325 72 aa5.42□□□□□ -1.54
HLA-F-223ENST00000465459 SPRR2AP35326 72 aa5.42□□□□□ -1.54
HLA-F-223ENST00000465459 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
HLA-F-223ENST00000465459 MDN1Q9NU22 5596 aa5.4□□□□□ -1.55
HLA-F-223ENST00000465459 NEBP20929 6669 aa5.39□□□□□ -1.55
HLA-F-223ENST00000465459 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
HLA-F-223ENST00000465459 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms