RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 H3BVH4 76 aa-1.23□□□□□ -2.61
NUCKS1-202ENST00000464938 FCER1GP30273 86 aa-1.23□□□□□ -2.61
NUCKS1-202ENST00000464938 MT1LQ93083 61 aa-1.23□□□□□ -2.61
NUCKS1-202ENST00000464938 CEP295Q9C0D2 2601 aa-1.23□□□□□ -2.61
NUCKS1-202ENST00000464938 COL6A5A8TX70 2615 aa-1.24□□□□□ -2.61
NUCKS1-202ENST00000464938 DNMBPQ6XZF7 1577 aa-1.24□□□□□ -2.61
NUCKS1-202ENST00000464938 SFTA3P0C7M3 94 aa-1.24□□□□□ -2.61
NUCKS1-202ENST00000464938 IQGAP3Q86VI3 1631 aa-1.26□□□□□ -2.61
NUCKS1-202ENST00000464938 ABCA9Q8IUA7 1624 aa-1.26□□□□□ -2.61
NUCKS1-202ENST00000464938 ATXN8Q156A1 80 aa-1.27□□□□□ -2.61
NUCKS1-202ENST00000464938 TIAM1Q13009 1591 aa-1.27□□□□□ -2.61
NUCKS1-202ENST00000464938 MADDQ8WXG6 1647 aa-1.27□□□□□ -2.61
NUCKS1-202ENST00000464938 MGAQ8IWI9 3026 aa-1.27□□□□□ -2.61
NUCKS1-202ENST00000464938 ADGRG4Q8IZF6 3080 aa-1.29□□□□□ -2.62
NUCKS1-202ENST00000464938 M0QY20 66 aa-1.29□□□□□ -2.62
NUCKS1-202ENST00000464938 M0QZ58 72 aa-1.29□□□□□ -2.62
NUCKS1-202ENST00000464938 MT1HL1P0DM35 61 aa-1.29□□□□□ -2.62
NUCKS1-202ENST00000464938 HILPDAQ9Y5L2 63 aa-1.3□□□□□ -2.62
NUCKS1-202ENST00000464938 A0A1B0GUL6 1792 aa-1.3□□□□□ -2.62
NUCKS1-202ENST00000464938 CROCC2H7BZ55 1655 aa-1.31□□□□□ -2.62
NUCKS1-202ENST00000464938 EYSQ5T1H1 3165 aa-1.31□□□□□ -2.62
NUCKS1-202ENST00000464938 SMG1Q96Q15 3661 aaKnown RBP-1.31□□□□□ -2.62
NUCKS1-202ENST00000464938 GLI2P10070 1586 aa-1.32□□□□□ -2.62
NUCKS1-202ENST00000464938 UGGT2Q9NYU1 1516 aa-1.32□□□□□ -2.62
NUCKS1-202ENST00000464938 CFAP46Q8IYW2 2715 aa-1.33□□□□□ -2.62
NUCKS1-202ENST00000464938 DUOX2Q9NRD8 1548 aa-1.34□□□□□ -2.62
NUCKS1-202ENST00000464938 A8MTW9 85 aa-1.34□□□□□ -2.62
NUCKS1-202ENST00000464938 K7EMI3 77 aa-1.35□□□□□ -2.63
NUCKS1-202ENST00000464938 LINC01546A6NGU7 62 aa-1.36□□□□□ -2.63
NUCKS1-202ENST00000464938 MT1GP13640 62 aa-1.36□□□□□ -2.63
NUCKS1-202ENST00000464938 FAM208AQ9UK61 1670 aaKnown RBP-1.37□□□□□ -2.63
NUCKS1-202ENST00000464938 GNG13Q9P2W3 67 aa-1.38□□□□□ -2.63
NUCKS1-202ENST00000464938 ABCA6Q8N139 1617 aa-1.39□□□□□ -2.63
NUCKS1-202ENST00000464938 LINC01549A6NIU2 74 aa-1.39□□□□□ -2.63
NUCKS1-202ENST00000464938 MT1MQ8N339 61 aa-1.39□□□□□ -2.63
NUCKS1-202ENST00000464938 ALS2Q96Q42 1657 aa-1.39□□□□□ -2.63
NUCKS1-202ENST00000464938 CSMD2Q7Z408 3487 aa-1.39□□□□□ -2.63
NUCKS1-202ENST00000464938 PREX2Q70Z35 1606 aa-1.4□□□□□ -2.63
NUCKS1-202ENST00000464938 MT2AP02795 61 aa-1.41□□□□□ -2.64
NUCKS1-202ENST00000464938 KAAG1Q9UBP8 84 aa-1.41□□□□□ -2.64
NUCKS1-202ENST00000464938 M0R1W7 72 aa-1.42□□□□□ -2.64
NUCKS1-202ENST00000464938 SMCO4Q9NRQ5 59 aa-1.42□□□□□ -2.64
NUCKS1-202ENST00000464938 ITPR2Q14571 2701 aa-1.42□□□□□ -2.64
NUCKS1-202ENST00000464938 TMEM167BQ9NRX6 74 aa-1.43□□□□□ -2.64
NUCKS1-202ENST00000464938 ABRACLQ9P1F3 81 aa-1.43□□□□□ -2.64
NUCKS1-202ENST00000464938 KIF21BO75037 1637 aa-1.44□□□□□ -2.64
NUCKS1-202ENST00000464938 PDCD5O14737 125 aa-1.44□□□□□ -2.64
NUCKS1-202ENST00000464938 LINC00308Q8TCZ7 52 aa-1.44□□□□□ -2.64
NUCKS1-202ENST00000464938 EEA1Q15075 1411 aa-1.44□□□□□ -2.64
NUCKS1-202ENST00000464938 IGIPA6NJ69 53 aa-1.45□□□□□ -2.64
NUCKS1-202ENST00000464938 SPART-AS1P0CW21 52 aa-1.45□□□□□ -2.64
NUCKS1-202ENST00000464938 SCRIBQ14160 1630 aa-1.45□□□□□ -2.64
NUCKS1-202ENST00000464938 DMXL2Q8TDJ6 3036 aa-1.45□□□□□ -2.64
NUCKS1-202ENST00000464938 EFCAB5A4FU69 1503 aa-1.46□□□□□ -2.64
NUCKS1-202ENST00000464938 SMIM27A0A1W2PRY6 76 aa-1.47□□□□□ -2.64
NUCKS1-202ENST00000464938 TLN1Q9Y490 2541 aaKnown RBP-1.47□□□□□ -2.65
NUCKS1-202ENST00000464938 ABCA13Q86UQ4 5058 aa-1.47□□□□□ -2.65
NUCKS1-202ENST00000464938 SERF2P84101 59 aa-1.48□□□□□ -2.65
NUCKS1-202ENST00000464938 EFCAB6Q5THR3 1501 aa-1.49□□□□□ -2.65
NUCKS1-202ENST00000464938 NMES1Q9C002 83 aa-1.49□□□□□ -2.65
NUCKS1-202ENST00000464938 WFDC10BQ8IUB3 73 aa-1.5□□□□□ -2.65
NUCKS1-202ENST00000464938 ZFHX4Q86UP3 3567 aa-1.5□□□□□ -2.65
NUCKS1-202ENST00000464938 VPS13CQ709C8 3753 aa-1.51□□□□□ -2.65
NUCKS1-202ENST00000464938 MT1BP07438 61 aa-1.51□□□□□ -2.65
NUCKS1-202ENST00000464938 CCDC180Q9P1Z9 1646 aa-1.51□□□□□ -2.65
NUCKS1-202ENST00000464938 DEFB4AO15263 64 aa-1.52□□□□□ -2.65
NUCKS1-202ENST00000464938 LMO7Q8WWI1 1683 aa-1.53□□□□□ -2.65
NUCKS1-202ENST00000464938 LEAP2Q969E1 77 aa-1.54□□□□□ -2.66
NUCKS1-202ENST00000464938 ATMQ13315 3056 aa-1.54□□□□□ -2.66
NUCKS1-202ENST00000464938 ABCA10Q8WWZ4 1543 aa-1.55□□□□□ -2.66
NUCKS1-202ENST00000464938 UGGT1Q9NYU2 1555 aa-1.55□□□□□ -2.66
NUCKS1-202ENST00000464938 CRYBG3Q68DQ2 2970 aa-1.56□□□□□ -2.66
NUCKS1-202ENST00000464938 SYCP2Q9BX26 1530 aa-1.56□□□□□ -2.66
NUCKS1-202ENST00000464938 H0YGX0 51 aa-1.57□□□□□ -2.66
NUCKS1-202ENST00000464938 DEFB131AP59861 70 aa-1.57□□□□□ -2.66
NUCKS1-202ENST00000464938 MYO15AQ9UKN7 3530 aa-1.58□□□□□ -2.66
NUCKS1-202ENST00000464938 A0A087WWC5 75 aa-1.58□□□□□ -2.66
NUCKS1-202ENST00000464938 POLR2KP53803 58 aaKnown RBP-1.58□□□□□ -2.66
NUCKS1-202ENST00000464938 CFAP54Q96N23 3096 aa-1.59□□□□□ -2.66
NUCKS1-202ENST00000464938 DEFB136Q30KP8 78 aa-1.59□□□□□ -2.66
NUCKS1-202ENST00000464938 PRUNE2Q8WUY3 3088 aa-1.6□□□□□ -2.66
NUCKS1-202ENST00000464938 AGLP35573 1532 aa-1.6□□□□□ -2.67
NUCKS1-202ENST00000464938 CPS1P31327 1500 aa-1.61□□□□□ -2.67
NUCKS1-202ENST00000464938 FREM2Q5SZK8 3169 aa-1.62□□□□□ -2.67
NUCKS1-202ENST00000464938 S100ZQ8WXG8 99 aa-1.62□□□□□ -2.67
NUCKS1-202ENST00000464938 MROH2AA6NES4 1674 aa-1.62□□□□□ -2.67
NUCKS1-202ENST00000464938 ABCA5Q8WWZ7 1642 aa-1.64□□□□□ -2.67
NUCKS1-202ENST00000464938 PRXQ9BXM0 1461 aa-1.68□□□□□ -2.68
NUCKS1-202ENST00000464938 TFF3Q07654 80 aa-1.68□□□□□ -2.68
NUCKS1-202ENST00000464938 BOD1L1Q8NFC6 3051 aa-1.68□□□□□ -2.68
NUCKS1-202ENST00000464938 PLNP26678 52 aa-1.69□□□□□ -2.68
NUCKS1-202ENST00000464938 KRTAP20-1Q3LI63 56 aa-1.69□□□□□ -2.68
NUCKS1-202ENST00000464938 NRXN3Q9Y4C0 1643 aa-1.69□□□□□ -2.68
NUCKS1-202ENST00000464938 WDFY3Q8IZQ1 3526 aa-1.7□□□□□ -2.68
NUCKS1-202ENST00000464938 RPS29P62273 56 aaKnown RBP-1.71□□□□□ -2.68
NUCKS1-202ENST00000464938 IQGAP1P46940 1657 aa-1.71□□□□□ -2.68
NUCKS1-202ENST00000464938 FRYLO94915 3013 aa-1.72□□□□□ -2.69
NUCKS1-202ENST00000464938 ADCY10Q96PN6 1610 aa-1.73□□□□□ -2.69
NUCKS1-202ENST00000464938 SMIM5Q71RC9 77 aa-1.73□□□□□ -2.69
NUCKS1-202ENST00000464938 SMIM2Q9BVW6 85 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms