RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 TPRXLQ17RH7 258 aa9.07□□□□□ -0.96
LMO2-204ENST00000464025 SPATA8Q6RVD6 105 aa9.07□□□□□ -0.96
LMO2-204ENST00000464025 UQCR11O14957 56 aa9.06□□□□□ -0.96
LMO2-204ENST00000464025 PMAIP1Q13794 54 aa9.06□□□□□ -0.96
LMO2-204ENST00000464025 MIR22HGQ0VDD5 57 aa8.98□□□□□ -0.97
LMO2-204ENST00000464025 KRTAP4-5Q9BYR2 181 aa8.98□□□□□ -0.97
LMO2-204ENST00000464025 A6NN06 94 aa8.95□□□□□ -0.98
LMO2-204ENST00000464025 KTN1-AS1Q86SY8 53 aa8.85□□□□□ -0.99
LMO2-204ENST00000464025 S4R3F8 94 aa8.83□□□□□ -1
LMO2-204ENST00000464025 A0A1B0GU33 70 aa8.82□□□□□ -1
LMO2-204ENST00000464025 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
LMO2-204ENST00000464025 LRP2P98164 4655 aa8.8□□□□□ -1
LMO2-204ENST00000464025 H0YAA0 97 aa8.78□□□□□ -1
LMO2-204ENST00000464025 RBM12B-AS1Q9P1G2 102 aa8.75□□□□□ -1.01
LMO2-204ENST00000464025 J3QL48 77 aa8.73□□□□□ -1.01
LMO2-204ENST00000464025 SEC61BP60468 96 aaKnown RBP8.72□□□□□ -1.01
LMO2-204ENST00000464025 LPAP08519 4548 aa8.71□□□□□ -1.01
LMO2-204ENST00000464025 KRTAP10-6P60371 365 aaPredicted RBP8.7□□□□□ -1.02
LMO2-204ENST00000464025 ABCA13Q86UQ4 5058 aa8.68□□□□□ -1.02
LMO2-204ENST00000464025 HERC2O95714 4834 aa8.66□□□□□ -1.02
LMO2-204ENST00000464025 BIRC6Q9NR09 4857 aa8.65□□□□□ -1.03
LMO2-204ENST00000464025 CSAG1Q6PB30 78 aa8.61□□□□□ -1.03
LMO2-204ENST00000464025 MUC17Q685J3 4493 aa8.57□□□□□ -1.04
LMO2-204ENST00000464025 K7ERS5 55 aa8.56□□□□□ -1.04
LMO2-204ENST00000464025 P0C880 135 aa8.51□□□□□ -1.05
LMO2-204ENST00000464025 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
LMO2-204ENST00000464025 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
LMO2-204ENST00000464025 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
LMO2-204ENST00000464025 KRTAP19-2Q3LHN2 52 aa8.4□□□□□ -1.06
LMO2-204ENST00000464025 M0QZ58 72 aa8.39□□□□□ -1.07
LMO2-204ENST00000464025 PRAC1Q96KF2 57 aa8.38□□□□□ -1.07
LMO2-204ENST00000464025 A0A0D9SG42 100 aa8.32□□□□□ -1.08
LMO2-204ENST00000464025 ROMO1P60602 79 aa8.22□□□□□ -1.09
LMO2-204ENST00000464025 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
LMO2-204ENST00000464025 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
LMO2-204ENST00000464025 HERC1Q15751 4861 aa8.2□□□□□ -1.1
LMO2-204ENST00000464025 PCLOQ9Y6V0 5065 aa8.18□□□□□ -1.1
LMO2-204ENST00000464025 FLGP20930 4061 aaPredicted RBP8.18□□□□□ -1.1
LMO2-204ENST00000464025 HMCN2Q8NDA2 5059 aa8.16□□□□□ -1.1
LMO2-204ENST00000464025 R4GN34 69 aa8.15□□□□□ -1.1
LMO2-204ENST00000464025 KRTAP25-1Q3LHN0 102 aa8.14□□□□□ -1.11
LMO2-204ENST00000464025 LINC01554Q52M75 96 aa8.12□□□□□ -1.11
LMO2-204ENST00000464025 LCE2BO14633 110 aa8.11□□□□□ -1.11
LMO2-204ENST00000464025 SPINT4Q6UDR6 99 aa8.11□□□□□ -1.11
LMO2-204ENST00000464025 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
LMO2-204ENST00000464025 LCE2CQ5TA81 110 aa8□□□□□ -1.13
LMO2-204ENST00000464025 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
LMO2-204ENST00000464025 MUC2Q02817 5179 aa7.96□□□□□ -1.14
LMO2-204ENST00000464025 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
LMO2-204ENST00000464025 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
LMO2-204ENST00000464025 MT1HP80294 61 aa7.79□□□□□ -1.16
LMO2-204ENST00000464025 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
LMO2-204ENST00000464025 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
LMO2-204ENST00000464025 RNF213Q63HN8 5207 aa7.7□□□□□ -1.18
LMO2-204ENST00000464025 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
LMO2-204ENST00000464025 CAMK2N1Q7Z7J9 78 aa7.69□□□□□ -1.18
LMO2-204ENST00000464025 M0R2T5 61 aa7.68□□□□□ -1.18
LMO2-204ENST00000464025 FAT4Q6V0I7 4981 aa7.67□□□□□ -1.18
LMO2-204ENST00000464025 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
LMO2-204ENST00000464025 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
LMO2-204ENST00000464025 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.2
LMO2-204ENST00000464025 MT2AP02795 61 aa7.58□□□□□ -1.2
LMO2-204ENST00000464025 MT1FP04733 61 aa7.54□□□□□ -1.2
LMO2-204ENST00000464025 KRTAP10-10P60014 251 aa7.51□□□□□ -1.21
LMO2-204ENST00000464025 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
LMO2-204ENST00000464025 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
LMO2-204ENST00000464025 TNP1P09430 55 aa7.43□□□□□ -1.22
LMO2-204ENST00000464025 KRTAP19-8Q3LI54 63 aa7.43□□□□□ -1.22
LMO2-204ENST00000464025 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
LMO2-204ENST00000464025 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
LMO2-204ENST00000464025 KRTAP9-3Q9BYQ3 159 aa7.29□□□□□ -1.24
LMO2-204ENST00000464025 MT1BP07438 61 aa7.27□□□□□ -1.25
LMO2-204ENST00000464025 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
LMO2-204ENST00000464025 MT1XP80297 61 aa7.13□□□□□ -1.27
LMO2-204ENST00000464025 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
LMO2-204ENST00000464025 LCE3AQ5TA76 89 aa7.01□□□□□ -1.29
LMO2-204ENST00000464025 PRO2289Q9P1D8 64 aa6.99□□□□□ -1.29
LMO2-204ENST00000464025 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
LMO2-204ENST00000464025 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
LMO2-204ENST00000464025 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
LMO2-204ENST00000464025 H3BS24 57 aa6.91□□□□□ -1.3
LMO2-204ENST00000464025 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
LMO2-204ENST00000464025 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
LMO2-204ENST00000464025 KRTAP10-12P60413 245 aa6.88□□□□□ -1.31
LMO2-204ENST00000464025 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
LMO2-204ENST00000464025 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
LMO2-204ENST00000464025 LUZP6Q538Z0 58 aa6.84□□□□□ -1.31
LMO2-204ENST00000464025 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
LMO2-204ENST00000464025 KRTAP12-3P60328 96 aa6.73□□□□□ -1.33
LMO2-204ENST00000464025 USH2AO75445 5202 aa6.6□□□□□ -1.35
LMO2-204ENST00000464025 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
LMO2-204ENST00000464025 KRTAP9-9Q9BYP9 154 aa6.57□□□□□ -1.36
LMO2-204ENST00000464025 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
LMO2-204ENST00000464025 KRTAP4-12Q9BQ66 201 aa6.54□□□□□ -1.36
LMO2-204ENST00000464025 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.36
LMO2-204ENST00000464025 KRTAP19-6Q3LI70 58 aa6.49□□□□□ -1.37
LMO2-204ENST00000464025 SSPOA2VEC9 5147 aa6.41□□□□□ -1.38
LMO2-204ENST00000464025 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.39
LMO2-204ENST00000464025 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
LMO2-204ENST00000464025 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms