RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
HDAC6-213ENST00000462730 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
HDAC6-213ENST00000462730 SPATA8Q6RVD6 105 aa7.84□□□□□ -1.15
HDAC6-213ENST00000462730 PRAC1Q96KF2 57 aa7.84□□□□□ -1.15
HDAC6-213ENST00000462730 A0A1B0GU69 56 aa7.83□□□□□ -1.16
HDAC6-213ENST00000462730 J3QL48 77 aa7.78□□□□□ -1.16
HDAC6-213ENST00000462730 UQCR11O14957 56 aa7.78□□□□□ -1.16
HDAC6-213ENST00000462730 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
HDAC6-213ENST00000462730 MIR22HGQ0VDD5 57 aa7.73□□□□□ -1.17
HDAC6-213ENST00000462730 XP32Q5T750 250 aa7.71□□□□□ -1.17
HDAC6-213ENST00000462730 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
HDAC6-213ENST00000462730 TPRXLQ17RH7 258 aa7.68□□□□□ -1.18
HDAC6-213ENST00000462730 PCLOQ9Y6V0 5065 aa7.67□□□□□ -1.18
HDAC6-213ENST00000462730 LPAP08519 4548 aa7.67□□□□□ -1.18
HDAC6-213ENST00000462730 LRP2P98164 4655 aa7.6□□□□□ -1.19
HDAC6-213ENST00000462730 CSAG1Q6PB30 78 aa7.59□□□□□ -1.2
HDAC6-213ENST00000462730 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
HDAC6-213ENST00000462730 HERC1Q15751 4861 aa7.52□□□□□ -1.21
HDAC6-213ENST00000462730 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
HDAC6-213ENST00000462730 ROMO1P60602 79 aa7.48□□□□□ -1.21
HDAC6-213ENST00000462730 HMCN2Q8NDA2 5059 aa7.43□□□□□ -1.22
HDAC6-213ENST00000462730 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
HDAC6-213ENST00000462730 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
HDAC6-213ENST00000462730 MUC17Q685J3 4493 aa7.36□□□□□ -1.23
HDAC6-213ENST00000462730 H0YAA0 97 aa7.36□□□□□ -1.23
HDAC6-213ENST00000462730 A0A1B0GU33 70 aa7.32□□□□□ -1.24
HDAC6-213ENST00000462730 K7ERS5 55 aa7.32□□□□□ -1.24
HDAC6-213ENST00000462730 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
HDAC6-213ENST00000462730 LCE2DQ5TA82 110 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-213ENST00000462730 KRTAP4-1Q9BYQ7 146 aa7.28□□□□□ -1.24
HDAC6-213ENST00000462730 S4R3F8 94 aa7.28□□□□□ -1.24
HDAC6-213ENST00000462730 KRTAP3-3Q9BYR6 98 aa7.24□□□□□ -1.25
HDAC6-213ENST00000462730 P0C880 135 aa7.21□□□□□ -1.26
HDAC6-213ENST00000462730 MUC2Q02817 5179 aa7.21□□□□□ -1.26
HDAC6-213ENST00000462730 KRTAP3-2Q9BYR7 98 aa7.17□□□□□ -1.26
HDAC6-213ENST00000462730 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
HDAC6-213ENST00000462730 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
HDAC6-213ENST00000462730 KRTAP19-2Q3LHN2 52 aa7.07□□□□□ -1.28
HDAC6-213ENST00000462730 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
HDAC6-213ENST00000462730 RNF213Q63HN8 5207 aa7.02□□□□□ -1.28
HDAC6-213ENST00000462730 KRTAP13-4Q3LI77 160 aa6.98□□□□□ -1.29
HDAC6-213ENST00000462730 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
HDAC6-213ENST00000462730 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
HDAC6-213ENST00000462730 A0A0D9SG42 100 aa6.92□□□□□ -1.3
HDAC6-213ENST00000462730 FAT4Q6V0I7 4981 aa6.92□□□□□ -1.3
HDAC6-213ENST00000462730 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
HDAC6-213ENST00000462730 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
HDAC6-213ENST00000462730 NDUFAF8A1L188 74 aa6.9□□□□□ -1.3
HDAC6-213ENST00000462730 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
HDAC6-213ENST00000462730 M0QZ58 72 aa6.77□□□□□ -1.33
HDAC6-213ENST00000462730 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
HDAC6-213ENST00000462730 MT1HP80294 61 aa6.76□□□□□ -1.33
HDAC6-213ENST00000462730 KRTAP12-1P59990 96 aa6.71□□□□□ -1.33
HDAC6-213ENST00000462730 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.33
HDAC6-213ENST00000462730 M0R2T5 61 aa6.71□□□□□ -1.34
HDAC6-213ENST00000462730 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-213ENST00000462730 R4GN34 69 aa6.7□□□□□ -1.34
HDAC6-213ENST00000462730 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
HDAC6-213ENST00000462730 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
HDAC6-213ENST00000462730 MT2AP02795 61 aa6.5□□□□□ -1.37
HDAC6-213ENST00000462730 MT1FP04733 61 aa6.48□□□□□ -1.37
HDAC6-213ENST00000462730 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.37
HDAC6-213ENST00000462730 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
HDAC6-213ENST00000462730 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
HDAC6-213ENST00000462730 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
HDAC6-213ENST00000462730 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
HDAC6-213ENST00000462730 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
HDAC6-213ENST00000462730 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
HDAC6-213ENST00000462730 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
HDAC6-213ENST00000462730 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
HDAC6-213ENST00000462730 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
HDAC6-213ENST00000462730 LCE2BO14633 110 aa6.13□□□□□ -1.43
HDAC6-213ENST00000462730 MT1BP07438 61 aa6.13□□□□□ -1.43
HDAC6-213ENST00000462730 TNP1P09430 55 aa6.02□□□□□ -1.45
HDAC6-213ENST00000462730 USH2AO75445 5202 aa6.01□□□□□ -1.45
HDAC6-213ENST00000462730 MT1XP80297 61 aa5.95□□□□□ -1.46
HDAC6-213ENST00000462730 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
HDAC6-213ENST00000462730 PRO2289Q9P1D8 64 aa5.93□□□□□ -1.46
HDAC6-213ENST00000462730 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
HDAC6-213ENST00000462730 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
HDAC6-213ENST00000462730 LCE3AQ5TA76 89 aa5.76□□□□□ -1.49
HDAC6-213ENST00000462730 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
HDAC6-213ENST00000462730 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
HDAC6-213ENST00000462730 INE1O15225 51 aa5.73□□□□□ -1.49
HDAC6-213ENST00000462730 KRTAP10-12P60413 245 aa5.71□□□□□ -1.49
HDAC6-213ENST00000462730 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
HDAC6-213ENST00000462730 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
HDAC6-213ENST00000462730 KRTAP8-1Q8IUC2 63 aa5.61□□□□□ -1.51
HDAC6-213ENST00000462730 KMT2DO14686 5537 aa5.56□□□□□ -1.52
HDAC6-213ENST00000462730 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
HDAC6-213ENST00000462730 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
HDAC6-213ENST00000462730 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
HDAC6-213ENST00000462730 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
HDAC6-213ENST00000462730 KRTAP19-5Q3LI72 72 aa5.44□□□□□ -1.54
HDAC6-213ENST00000462730 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
HDAC6-213ENST00000462730 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
HDAC6-213ENST00000462730 MACF1Q9UPN3 7388 aaKnown RBP5.25□□□□□ -1.57
HDAC6-213ENST00000462730 MT1EP04732 61 aa5.2□□□□□ -1.58
HDAC6-213ENST00000462730 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.58
HDAC6-213ENST00000462730 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms