RNA–Protein interactions for RNA: ENST00000461448.5

SNHG12-201, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-201ENST00000461448 KRTAP10-6P60371 365 aaPredicted RBP9.52□□□□□ -0.89
SNHG12-201ENST00000461448 CYSTM1Q9H1C7 97 aa9.5□□□□□ -0.89
SNHG12-201ENST00000461448 LCA10Q71F78 164 aa9.47□□□□□ -0.89
SNHG12-201ENST00000461448 LORP23490 312 aaPredicted RBP9.46□□□□□ -0.89
SNHG12-201ENST00000461448 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
SNHG12-201ENST00000461448 ATP5EP56381 51 aaPredicted RBP9.37□□□□□ -0.91
SNHG12-201ENST00000461448 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
SNHG12-201ENST00000461448 PCP4P48539 62 aa9.36□□□□□ -0.91
SNHG12-201ENST00000461448 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
SNHG12-201ENST00000461448 TMEM258P61165 79 aa9.34□□□□□ -0.91
SNHG12-201ENST00000461448 SPTSSBQ8NFR3 76 aa9.33□□□□□ -0.92
SNHG12-201ENST00000461448 KRTAP9-8Q9BYQ0 159 aa9.33□□□□□ -0.92
SNHG12-201ENST00000461448 MT2AP02795 61 aa9.27□□□□□ -0.93
SNHG12-201ENST00000461448 COA5Q86WW8 74 aa9.27□□□□□ -0.93
SNHG12-201ENST00000461448 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
SNHG12-201ENST00000461448 MT1FP04733 61 aa9.2□□□□□ -0.94
SNHG12-201ENST00000461448 H0YAA0 97 aa9.16□□□□□ -0.94
SNHG12-201ENST00000461448 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
SNHG12-201ENST00000461448 KRTAP9-2Q9BYQ4 174 aa9.08□□□□□ -0.96
SNHG12-201ENST00000461448 ADM2Q7Z4H4 148 aa9.05□□□□□ -0.96
SNHG12-201ENST00000461448 SERP1Q9Y6X1 66 aa9.03□□□□□ -0.96
SNHG12-201ENST00000461448 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
SNHG12-201ENST00000461448 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
SNHG12-201ENST00000461448 SEC61GP60059 68 aa8.96□□□□□ -0.98
SNHG12-201ENST00000461448 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
SNHG12-201ENST00000461448 P0C880 135 aa8.89□□□□□ -0.99
SNHG12-201ENST00000461448 LCE2BO14633 110 aa8.87□□□□□ -0.99
SNHG12-201ENST00000461448 A0A1B0GU69 56 aa8.83□□□□□ -1
SNHG12-201ENST00000461448 RPS28P62857 69 aaKnown RBP8.83□□□□□ -1
SNHG12-201ENST00000461448 R4GN34 69 aa8.82□□□□□ -1
SNHG12-201ENST00000461448 KRTAP19-1Q8IUB9 90 aa8.81□□□□□ -1
SNHG12-201ENST00000461448 PRR15LQ9BU68 103 aa8.8□□□□□ -1
SNHG12-201ENST00000461448 SPRR2GQ9BYE4 73 aa8.8□□□□□ -1
SNHG12-201ENST00000461448 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
SNHG12-201ENST00000461448 V9GYY9 64 aa8.75□□□□□ -1.01
SNHG12-201ENST00000461448 SMIM26A0A096LP01 95 aa8.74□□□□□ -1.01
SNHG12-201ENST00000461448 M0QZ58 72 aa8.74□□□□□ -1.01
SNHG12-201ENST00000461448 USH2AO75445 5202 aa8.72□□□□□ -1.01
SNHG12-201ENST00000461448 A0A1B0GU33 70 aa8.69□□□□□ -1.02
SNHG12-201ENST00000461448 FSIP2Q5CZC0 6907 aa8.68□□□□□ -1.02
SNHG12-201ENST00000461448 Q1T7F1 81 aa8.67□□□□□ -1.02
SNHG12-201ENST00000461448 CRCT1Q9UGL9 99 aa8.67□□□□□ -1.02
SNHG12-201ENST00000461448 KRTAP19-8Q3LI54 63 aa8.64□□□□□ -1.03
SNHG12-201ENST00000461448 Q5VV11 94 aa8.62□□□□□ -1.03
SNHG12-201ENST00000461448 KRTAP9-6A0A140TA67 174 aa8.6□□□□□ -1.03
SNHG12-201ENST00000461448 LINC01554Q52M75 96 aa8.58□□□□□ -1.04
SNHG12-201ENST00000461448 MT1BP07438 61 aa8.57□□□□□ -1.04
SNHG12-201ENST00000461448 KRTAP13-4Q3LI77 160 aa8.54□□□□□ -1.04
SNHG12-201ENST00000461448 SSPOA2VEC9 5147 aa8.53□□□□□ -1.04
SNHG12-201ENST00000461448 PSPHP1O15172 72 aa8.51□□□□□ -1.05
SNHG12-201ENST00000461448 SPATA8Q6RVD6 105 aa8.5□□□□□ -1.05
SNHG12-201ENST00000461448 UQCR11O14957 56 aa8.49□□□□□ -1.05
SNHG12-201ENST00000461448 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
SNHG12-201ENST00000461448 A6NN06 94 aa8.47□□□□□ -1.05
SNHG12-201ENST00000461448 KRTAP19-6Q3LI70 58 aa8.45□□□□□ -1.06
SNHG12-201ENST00000461448 A0A0D9SG42 100 aa8.4□□□□□ -1.07
SNHG12-201ENST00000461448 MIR22HGQ0VDD5 57 aa8.33□□□□□ -1.08
SNHG12-201ENST00000461448 A6NED7 52 aa8.3□□□□□ -1.08
SNHG12-201ENST00000461448 A8MU10 97 aa8.29□□□□□ -1.08
SNHG12-201ENST00000461448 FCGBPQ9Y6R7 5405 aaPredicted RBP8.27□□□□□ -1.09
SNHG12-201ENST00000461448 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.09
SNHG12-201ENST00000461448 KRTAP10-5P60370 271 aa8.26□□□□□ -1.09
SNHG12-201ENST00000461448 PRO2289Q9P1D8 64 aa8.25□□□□□ -1.09
SNHG12-201ENST00000461448 KRTAP12-1P59990 96 aa8.23□□□□□ -1.09
SNHG12-201ENST00000461448 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.1
SNHG12-201ENST00000461448 H3BS24 57 aa8.18□□□□□ -1.1
SNHG12-201ENST00000461448 KRTAP12-2P59991 146 aa8.18□□□□□ -1.1
SNHG12-201ENST00000461448 MT1XP80297 61 aa8.17□□□□□ -1.1
SNHG12-201ENST00000461448 K7ERS5 55 aa8.13□□□□□ -1.11
SNHG12-201ENST00000461448 CDC42SE1Q9NRR8 79 aa8.07□□□□□ -1.12
SNHG12-201ENST00000461448 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
SNHG12-201ENST00000461448 A0A0A0MQY5 61 aa8.03□□□□□ -1.12
SNHG12-201ENST00000461448 MACF1Q9UPN3 7388 aaKnown RBP7.91□□□□□ -1.14
SNHG12-201ENST00000461448 BRK1Q8WUW1 75 aa7.85□□□□□ -1.15
SNHG12-201ENST00000461448 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
SNHG12-201ENST00000461448 C10orf95Q9H7T3 257 aa7.8□□□□□ -1.16
SNHG12-201ENST00000461448 KRTAP9-7A8MTY7 169 aa7.79□□□□□ -1.16
SNHG12-201ENST00000461448 KRTAP10-12P60413 245 aa7.75□□□□□ -1.17
SNHG12-201ENST00000461448 TNP1P09430 55 aa7.74□□□□□ -1.17
SNHG12-201ENST00000461448 SYNE2Q8WXH0 6885 aaKnown RBP7.73□□□□□ -1.17
SNHG12-201ENST00000461448 KRTAP6-3Q3LI67 103 aa7.69□□□□□ -1.18
SNHG12-201ENST00000461448 KRTAP4-8A0A0G2JLE6 195 aa7.67□□□□□ -1.18
SNHG12-201ENST00000461448 KRTAP4-8Q9BYQ9 185 aa7.67□□□□□ -1.18
SNHG12-201ENST00000461448 ROMO1P60602 79 aa7.63□□□□□ -1.19
SNHG12-201ENST00000461448 KRTAP8-1Q8IUC2 63 aa7.63□□□□□ -1.19
SNHG12-201ENST00000461448 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
SNHG12-201ENST00000461448 KMT2DO14686 5537 aa7.62□□□□□ -1.19
SNHG12-201ENST00000461448 KRTAP5-9P26371 169 aa7.53□□□□□ -1.2
SNHG12-201ENST00000461448 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
SNHG12-201ENST00000461448 PRO0628Q9UI54 55 aa7.46□□□□□ -1.21
SNHG12-201ENST00000461448 PMAIP1Q13794 54 aa7.44□□□□□ -1.22
SNHG12-201ENST00000461448 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
SNHG12-201ENST00000461448 KRTAP23-1A1A580 65 aa7.39□□□□□ -1.23
SNHG12-201ENST00000461448 MUC12Q9UKN1 5478 aa7.31□□□□□ -1.24
SNHG12-201ENST00000461448 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
SNHG12-201ENST00000461448 KRTAP19-7Q3SYF9 63 aa7.29□□□□□ -1.24
SNHG12-201ENST00000461448 KRTAP19-5Q3LI72 72 aa7.27□□□□□ -1.25
SNHG12-201ENST00000461448 SPRR2EP22531 72 aa7.26□□□□□ -1.25
SNHG12-201ENST00000461448 SPRR2BP35325 72 aa7.26□□□□□ -1.25
SNHG12-201ENST00000461448 SPRR2AP35326 72 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms